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A. Zeida · SciRah

Researcher profile · Semantic Scholar

A. Zeida

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A. Zeida — researcher profile on SciRah

h-index: 20
Works: 99
Citations: 1,363

Most-cited papers

The superoxide radical switch in the biology of nitric oxide and peroxynitrite.
L. Piacenza, A. Zeida, M. Trujillo, R. Radi
2022Physiological Reviews182 citations
Semantic Scholar
A Coarse Grained Model for Atomic-Detailed DNA Simulations with Explicit Electrostatics.
P. Dans, A. Zeida, Matías R. Machado, Sergio Pantano
2010Journal of Chemical Theory and Computation142 citations
Semantic Scholar
Catalysis of Peroxide Reduction by Fast Reacting Protein Thiols.
A. Zeida, M. Trujillo, G. Ferrer-Sueta, A. Denicola +2 more
2019Chemical Reviews88 citations Open access
Semantic Scholar
Acidity and nucleophilic reactivity of glutathione persulfide
Dayana Benchoam, J. Semelak, Ernesto Cuevasanta, M. Mastrogiovanni +7 more
2020Journal of Biological Chemistry80 citations Open access
Semantic Scholar
Molecular basis of the mechanism of thiol oxidation by hydrogen peroxide in aqueous solution: challenging the SN2 paradigm
A. Zeida, R. Babbush, M. C. González Lebrero, M. Trujillo +2 more
2012Chemical Research in Toxicology68 citations Open access
Semantic Scholar
Mechanisms and consequences of protein cysteine oxidation: the role of the initial short-lived intermediates.
L. Turell, A. Zeida, M. Trujillo
2020Essays in Biochemistry47 citations
Semantic Scholar
The Extraordinary Catalytic Ability of Peroxiredoxins: a Combined Experimental and QM/MM Study on the Fast Thiol Oxidation Step
A. Zeida, Aníbal M. Reyes, M. C. González Lebrero, R. Radi +2 more
2014Chemical Communications41 citations Open access
Semantic Scholar
Insights into the mechanism of the reaction between hydrogen sulfide and peroxynitrite.
Ernesto Cuevasanta, A. Zeida, S. Carballal, Rudolf Wedmann +6 more
2015Free Radical Biology & Medicine40 citations Open access
Semantic Scholar
Thiol-based chemical probes exhibit antiviral activity against SARS-CoV-2 via allosteric disulfide disruption in the spike glycoprotein
Yun-Long Shi, A. Zeida, C. Edwards, Michael L. Mallory +10 more
2022Proceedings of the National Academy of Sciences of the United States of America38 citations Open access
Semantic Scholar
Breathing, bubbling, and bending: DNA flexibility from multimicrosecond simulations.
A. Zeida, Matías R. Machado, P. Dans, Sergio Pantano
2012Physical review. E, Statistical, nonlinear, and soft matter physics38 citations Open access
Semantic Scholar
Thiol redox biochemistry: insights from computer simulations
A. Zeida, Carlos M. A. Guardia, Pablo Lichtig, Laura L. Perissinotti +5 more
2014Biophysical Reviews35 citations Open access
Semantic Scholar
Mechanism of cysteine oxidation by peroxynitrite: An integrated experimental and theoretical study.
A. Zeida, M. C. González Lebrero, R. Radi, M. Trujillo +1 more
2013Archives of Biochemistry and Biophysics33 citations Open access
Semantic Scholar
Akt Is S-Palmitoylated: A New Layer of Regulation for Akt
M. Blaustein, E. Piegari, Camila Martinez Calejman, Antonella Vila +9 more
2021Frontiers in Cell and Developmental Biology32 citations Open access
Semantic Scholar
Kinetics of formation and reactivity of the persulfide in the one-cysteine peroxiredoxin from Mycobacterium tuberculosis
Ernesto Cuevasanta, Aníbal M. Reyes, A. Zeida, M. Mastrogiovanni +4 more
2019Journal of Biological Chemistry31 citations Open access
Semantic Scholar
Chemical Reactivity and Spectroscopy Explored From QM/MM Molecular Dynamics Simulations Using the LIO Code
J. P. Marcolongo, A. Zeida, J. Semelak, Nicolás O Foglia +4 more
2018Frontiers in Chemistry29 citations Open access
Semantic Scholar
Redox sensitive human mitochondrial aconitase and its interaction with frataxin: In vitro and in silico studies confirm that it takes two to tango.
S. Mansilla, Verónica Tórtora, Florencia Pignataro, Santiago Sastre +6 more
2023Free Radical Biology & Medicine24 citations Open access
Semantic Scholar
Mitochondrial Peroxiredoxin 3 Is Rapidly Oxidized and Hyperoxidized by Fatty Acid Hydroperoxides
Giuliana Cardozo, M. Mastrogiovanni, A. Zeida, Nicolás Viera +3 more
2023Antioxidants23 citations Open access
Semantic Scholar
Kinetics, subcellular localization, and contribution to parasite virulence of a Trypanosoma cruzi hybrid type A heme peroxidase (TcAPx-CcP)
Martín Hugo, Alejandra Martinez, M. Trujillo, D. Estrada +9 more
2017Proceedings of the National Academy of Sciences of the United States of America22 citations Open access
Semantic Scholar
PrxQ B from Mycobacterium tuberculosis is a monomeric, thioredoxin-dependent and highly efficient fatty acid hydroperoxide reductase.
Aníbal M. Reyes, D. S. Vazquez, A. Zeida, Martín Hugo +6 more
2016Free Radical Biology & Medicine22 citations Open access
Semantic Scholar
Assessing the Accuracy of the SIRAH Force Field to Model DNA at Coarse Grain Level
P. Dans, L. Darré, Matías R. Machado, A. Zeida +2 more
2013Brazilian Symposium on Bioinformatics21 citations
Semantic Scholar
From quantum to subcellular scales: multi-scale simulation approaches and the SIRAH force field
Matías R. Machado, A. Zeida, L. Darré, Sergio Pantano
2019Interface Focus20 citations Open access
Semantic Scholar
Novel Lennard-Jones Parameters for Cysteine and Selenocysteine in the AMBER Force Field
F. N. Pedron, A. Messias, A. Zeida, A. Roitberg +1 more
2023Journal of Chemical Information and Modeling18 citations
Semantic Scholar
Gating in plant plasma membrane aquaporins: the involvement of leucine in the formation of a pore constriction in the closed state
Agustina Canessa Fortuna, Gerardo Zerbetto De Palma, Lucio Aliperti Car, Luciano Armentia +4 more
2019The FEBS Journal18 citations Open access
Semantic Scholar
Nitrosodisulfide [S2NO]− (perthionitrite) is a true intermediate during the “cross-talk” of nitrosyl and sulfide
J. P. Marcolongo, Uriel N. Morzan, A. Zeida, D. Scherlis +1 more
201618 citations Open access
Semantic Scholar
Theoretical investigation of the mechanism of nitroxyl decomposition in aqueous solution.
M. Bringas, J. Semelak, A. Zeida, D. Estrin
2016Journal of Inorganic Biochemistry18 citations Open access
Semantic Scholar
Possible molecular basis of the biochemical effects of cysteine-derived persulfides
Ernesto Cuevasanta, Dayana Benchoam, J. Semelak, Matías N. Möller +4 more
2022Frontiers in Molecular Biosciences17 citations Open access
Semantic Scholar
Molecular Basis of Hydroperoxide Specificity in Peroxiredoxins: The Case of AhpE from Mycobacterium tuberculosis.
A. Zeida, Aníbal M. Reyes, Pablo Lichtig, Martín Hugo +6 more
2015Biochemistry17 citations Open access
Semantic Scholar
Improving Efficiency in SMD Simulations Through a Hybrid Differential Relaxation Algorithm.
C. Ramírez, A. Zeida, G. E. Jara, A. Roitberg +1 more
2014Journal of Chemical Theory and Computation17 citations Open access
Semantic Scholar
Multiscale Modeling of Thiol Overoxidation in Peroxiredoxins by Hydrogen Peroxide
J. Semelak, F. Battistini, R. Radi, M. Trujillo +2 more
2019Journal of Chemical Information and Modeling14 citations Open access
Semantic Scholar
Kinetic and structural assessment of the reduction of human 2‐Cys peroxiredoxins by thioredoxins
Sebastián F. Villar, Laura Corrales-González, Belén Márquez de Los Santos, Joaquín Dalla-Rizza +3 more
2023The FEBS Journal13 citations Open access
Semantic Scholar
Exploring the Catalytic Mechanism of Human Glutamine Synthetase by Computer Simulations.
F. Issoglio, Nicolás Campolo, A. Zeida, T. Grune +3 more
2016Biochemistry13 citations Open access
Semantic Scholar
Reaction of peroxynitrite with thiols, hydrogen sulfide and persulfides
M. Trujillo, Ernesto Cuevasanta, L. Turell, Dayana Benchoam +6 more
2024Redox Biochemistry and Chemistry12 citations Open access
Semantic Scholar
Thionitrous Acid/Thionitrite and Perthionitrite Intermediates in the “Crosstalk” of NO and H2S
J. P. Marcolongo, A. Zeida, L. D. Slep, J. Olabe
201712 citations Open access
Semantic Scholar
PIP aquaporin pH‐sensing is regulated by the length and charge of the C‐terminal region
Florencia Scochera, Gerardo Zerbetto De Palma, Agustina Canessa Fortuna, Jonathan Chevriau +4 more
2021The FEBS Journal11 citations Open access
Semantic Scholar
Nitrosodisulfide [S2NO]- (perthionitrite) is a true intermediate during the "cross-talk" of nitrosyl and sulfide.
J. P. Marcolongo, Uriel N. Morzan, A. Zeida, D. Scherlis +1 more
2016Physical Chemistry, Chemical Physics - PCCP11 citations Open access
Semantic Scholar
Hydrogen peroxide transport by aquaporins: insights from molecular modeling and simulations
Jonathan Chevriau, Gerardo Zerbetto De Palma, K. Alleva, A. Zeida
2025Biophysical Reviews10 citations Open access
Semantic Scholar
Cardiolipin interactions with cytochrome c increase tyrosine nitration yields and site-specificity.
Verónica Demicheli, Florencia Tomasina, Santiago Sastre, A. Zeida +4 more
2021Archives of Biochemistry and Biophysics10 citations
Semantic Scholar
Genetic and transcriptomic evidences suggest ARO10 genes are involved in benzenoid biosynthesis by yeast
M. J. Valera, A. Zeida, E. Boido, G. Beltran +5 more
2020Yeast10 citations
Semantic Scholar
A computational investigation of the reactions of tyrosyl, tryptophanyl, and cysteinyl radicals with nitric oxide and molecular oxygen
F. N. Pedron, S. Bartesaghi, D. Estrin, R. Radi +1 more
2018Free radical research9 citations Open access
Semantic Scholar
Comparative Analysis of Hydrogen Peroxide and Peroxynitrite Reactivity with Thiols
M. Trujillo, S. Carballal, A. Zeida, R. Radi
20176 citations
Semantic Scholar
Permeation mechanisms of hydrogen peroxide and water through Plasma membrane Intrinsic Protein (PIP) aquaporins.
Jonathan Chevriau, Gerardo Zerbetto De Palma, Cintia Jozefkowicz, V. Vitali +6 more
2024Biochemical Journal5 citations Open access
Semantic Scholar
Minimum Free Energy Pathways of Reactive Processes with Nudged Elastic Bands.
J. Semelak, A. Zeida, Nicolás O Foglia, D. Estrin
2023Journal of Chemical Theory and Computation5 citations Open access
Semantic Scholar
De novo sequencing and construction of a unique antibody for the recognition of alternative conformations of cytochrome c in cells
Florencia Tomasina, Jennyfer Martínez, A. Zeida, M. Chiribao +17 more
2022Proceedings of the National Academy of Sciences of the United States of America5 citations Open access
Semantic Scholar
Nitration-driven structural changes in Hsp90 linked to gain of pathological functions
Tilottama Chatterjee, Alfonso Taboada, I. Logan, P. Paul +5 more
2025Biochemical Journal4 citations
Semantic Scholar
Substrate and Product-Assisted Catalysis: Molecular Aspects behind Structural Switches along Organic Hydroperoxide Resistance Protein Catalytic Cycle
R. Domingos, R. D. Teixeira, A. Zeida, W. Agudelo +7 more
20204 citations Open access
Semantic Scholar
A Noncatalytic Cysteine Residue Modulates Cobalamin Reactivity in the Human B12 Processing Enzyme CblC.
A. J. Esser, Santiago Sastre, T. J. Dinh, Viola Tanner +8 more
2025Biochemistry3 citations
Semantic Scholar
Catalytic Mechanism of Mycobacterium tuberculosis Methionine Sulfoxide Reductase A.
Santiago Sastre, Bruno Manta, J. Semelak, D. Estrin +3 more
2024Biochemistry3 citations Open access
Semantic Scholar
Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate
Samuel L. Freeman, Vera Skafar, H. Kwon, Alistair J. Fielding +9 more
2022Journal of Biological Chemistry3 citations Open access
Semantic Scholar
Thiol-based mucolytics exhibit antiviral activity against SARS-CoV-2 through allosteric disulfide disruption in the spike glycoprotein
Yun-Long Shi, A. Zeida, C. Edwards, Michael L. Mallory +10 more
2021bioRxiv3 citations Open access
Semantic Scholar
Interactions of hydrogen sulfide with AhpE from Mycobacterium tuberculosis: formation and reactions of a model peroxiredoxin persulfide
Aníbal M. Reyes, Ernesto Cuevasanta, María Inés De Armas, M. Mastrogiovanni +4 more
2018Free Radical Biology & Medicine3 citations
Semantic Scholar

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