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A. Malousi · SciRah

Researcher profile · Semantic Scholar

A. Malousi

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A. Malousi — researcher profile on SciRah

h-index: 16
Works: 73
Citations: 986

Most-cited papers

PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
N. Olson, Justin Wagner, Jennifer McDaniel, Sarah Stephens +69 more
2020bioRxiv185 citations Open access
Semantic Scholar
Targeted KRAS Mutation Assessment on Patient Tumor Histologic Material in Real Time Diagnostics
V. Kotoula, Elpida Charalambous, B. Biesmans, A. Malousi +3 more
2009PLoS ONE90 citations Open access
Semantic Scholar
The Healthgrid White Paper
V. Breton, K. Dean, T. Solomonides, I. Blanquer +36 more
2005HealthGrid83 citations
Semantic Scholar
Human Epigenome Data Reveal Increased CpG Methylation in Alternatively Spliced Sites and Putative Exonic Splicing Enhancers
C. Anastasiadou, A. Malousi, N. Maglaveras, S. Kouidou
2011DNA and Cell Biology69 citations
Semantic Scholar
A Personalized Framework for Medication Treatment Management in Chronic Care
V. Koutkias, I. Chouvarda, A. Triantafyllidis, A. Malousi +2 more
2010IEEE Transactions on Information Technology in Biomedicine58 citations
Semantic Scholar
First Report of Isolation and Genome Sequence of L. petauri Strain from a Rainbow Trout Lactococcosis Outbreak
C. Kotzamanidis, A. Malousi, K. Bitchava, G. Vafeas +5 more
2020Current Microbiology36 citations
Semantic Scholar
Staphylococcus aureus Isolated from Ruminants with Mastitis in Northern Greece Dairy Herds: Genetic Relatedness and Phenotypic and Genotypic Characterization
C. Kotzamanidis, G. Vafeas, V. Giantzi, S. Anastasiadou +5 more
2021Toxins34 citations Open access
Semantic Scholar
16S-23S rRNA Internal Transcribed Spacer Region (ITS) Sequencing: A Potential Molecular Diagnostic Tool for Differentiating Lactococcus garvieae and Lactococcus petauri
Nadia Stoppani, S. Colussi, P. Pastorino, M. Prearo +13 more
2023Microorganisms30 citations Open access
Semantic Scholar
DNA hypermethylation of alternatively spliced and repeat sequences in humans
A. Malousi, S. Kouidou
2012Zeitschrift für Induktive Abstammungs- und Vererbungslehre29 citations Open access
Semantic Scholar
Methylation and repeats in silent and nonsense mutations of p53.
S. Kouidou, A. Malousi, N. Maglaveras
2006Mutation research29 citations
Semantic Scholar
Emergence of Klebsiella pneumoniae ST11 co-producing NDM-1 and OXA-48 carbapenemases in Greece.
E. Protonotariou, G. Meletis, F. Chatzopoulou, A. Malousi +2 more
2019Journal of Global Antimicrobial Resistance27 citations
Semantic Scholar
Integrated epigenomic and transcriptomic analysis reveals TP63 as a novel player in clinically aggressive chronic lymphocytic leukemia
N. Papakonstantinou, Stavroula Ntoufa, M. Tsagiopoulou, Theodoros Moysiadis +27 more
2019International Journal of Cancer26 citations Open access
Semantic Scholar
Reliable machine learning models in genomic medicine using conformal prediction
Christina Papangelou, Konstantinos Kyriakidis, P. Natsiavas, Ioanna Chouvarda +1 more
2024medRxiv19 citations Open access
Semantic Scholar
DNA methylation profiles in chronic lymphocytic leukemia patients treated with chemoimmunotherapy
M. Tsagiopoulou, N. Papakonstantinou, Theodoros Moysiadis, L. Mansouri +18 more
2019Clinical Epigenetics19 citations Open access
Semantic Scholar
Computational Advances in Drug Safety: Systematic and Mapping Review of Knowledge Engineering Based Approaches
P. Natsiavas, A. Malousi, C. Bousquet, M. Jaulent +1 more
2019Frontiers in Pharmacology19 citations Open access
Semantic Scholar
Intronic CpG content and alternative splicing in human genes containing a single cassette exon
A. Malousi, N. Maglaveras, S. Kouidou
2008Epigenetics17 citations Open access
Semantic Scholar
Risk-associated coding synonymous SNPs in type 2 diabetes and neurodegenerative diseases: genetic silence and the underrated association with splicing regulation and epigenetics.
Maria Karambataki, A. Malousi, S. Kouidou
2014Mutation research15 citations
Semantic Scholar
Li–Fraumeni and Li–Fraumeni‐like syndrome mutations in p53 are associated with exonic methylation and splicing regulatory elements
S. Kouidou, A. Malousi, N. Maglaveras
2009Molecular Carcinogenesis14 citations Open access
Semantic Scholar
Synonymous Polymorphisms at Splicing Regulatory Sites are Associated with CpGs in Neurodegenerative Disease-Related Genes
M. Karambataki, A. Malousi, N. Maglaveras, S. Kouidou
2010Neuromolecular medicine12 citations
Semantic Scholar
Probable Three-Species In Vivo Transfer of blaNDM-1 in a Single Patient in Greece: Occurrence of NDM-1-Producing Klebsiella pneumoniae, Proteus mirabilis, and Morganella morganii
G. Meletis, A. Malousi, A. Tychala, Angeliki Kassomenaki +5 more
2023Antibiotics11 citations Open access
Semantic Scholar
Age-dependent methylation in epigenetic clock CpGs is associated with G-quadruplex, co-transcriptionally formed RNA structures and tentative splice sites
A. Malousi, Alexandra Z. Andreou, Elisavet Georgiou, G. Tzimagiorgis +2 more
2018Epigenetics11 citations Open access
Semantic Scholar
Association of two synonymous splicing-associated CpG single nucleotide polymorphisms in calpain 10 and solute carrier family 2 member 2 with type 2 diabetes
M. Karambataki, A. Malousi, G. Tzimagiorgis, C. Haitoglou +5 more
2016Biomedical Reports10 citations Open access
Semantic Scholar
SpliceIT: A hybrid method for splice signal identification based on probabilistic and biological inference
A. Malousi, I. Chouvarda, V. Koutkias, S. Kouidou +1 more
2010Journal of Biomedical Informatics10 citations Open access
Semantic Scholar
River waters in Greece: A reservoir for clinically relevant extended-spectrum-β-lactamases-producing Escherichia coli.
C. Kotzamanidis, A. Malousi, A. Paraskeva, G. Vafeas +8 more
2024Science of the Total Environment9 citations
Semantic Scholar
Unveiling the genetic basis of biochemical pathways of plant growth promotion in Bacillus pumilus and the first genomic insights into B. pseudomycoides as a biostimulant
Esmeralda Dushku, C. Kotzamanidis, Athanasios Kargas, Maria-Eleni Fanara-Lolou +4 more
2025Current Research in Microbial Sciences8 citations Open access
Semantic Scholar
Rapid Reversal of Carbapenemase-Producing Pseudomonas aeruginosa Epidemiology from blaVIM- to blaNDM-harbouring Isolates in a Greek Tertiary Care Hospital
E. Protonotariou, G. Meletis, Nikoletta Vlachodimou, A. Malousi +5 more
2024Antibiotics8 citations Open access
Semantic Scholar
Dysregulation of Plasma miR-146a and miR-155 Expression Profile in Mycosis Fungoides Is Associated with rs2910164 and rs767649 Polymorphisms
C. Avgeros, A. Patsatsi, D. Dimitriadis, A. Malousi +7 more
2022International Journal of Molecular Sciences8 citations Open access
Semantic Scholar
VaccineDesigner: A Web-Based Tool for Streamlined Multi-Epitope Vaccine Design
Dimitrios Trygoniaris, Anna Korda, A. Paraskeva, Esmeralda Dushku +4 more
2024bioRxiv7 citations Open access
Semantic Scholar
Biological Effects of “Inflammageing” on Human Oral Cells: Insights into a Potential Confounder of Age-Related Diseases
E. Alexakou, A. Bakopoulou, D. Apatzidou, A. Kritis +2 more
2023International Journal of Molecular Sciences7 citations Open access
Semantic Scholar
Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.
C. Kotzamanidis, A. Malousi, Esmeralda Dushku, A. Dobly +6 more
2022Fish and Shellfish Immunology7 citations
Semantic Scholar
G:C > A:T mutations and potential epigenetic regulation of p53 in breast cancer
S. Kouidou, A. Malousi, A. Kyventidis, A. Fragou +1 more
2007Breast Cancer Research and Treatment7 citations
Semantic Scholar
First Outbreak of Aeromoniasis, Caused by Aeromonas veronii, in Farmed European Seabass (Dicentrarchus labrax) in the Ionian Sea, Greece
E. Lampou, Eleni Psychari, Konstantina Louka, C. Kotzamanidis +5 more
2025Pathogens6 citations Open access
Semantic Scholar
Molecular Profiling of A549 Cell-Derived Exosomes: Proteomic, miRNA, and Interactome Analysis for Identifying Potential Key Regulators in Lung Cancer
A. Giannopoulos-Dimitriou, A. Saiti, A. Malousi, A. Anagnostopoulos +5 more
2024Cancers6 citations Open access
Semantic Scholar
The Influence of Dietary Supplementation with Dried Olive Pulp on Gut Microbiota, Production Performance, Egg Quality Traits, and Health of Laying Hens
A. Dedousi, C. Kotzamanidis, A. Malousi, Virginia Giantzi +1 more
2024Microorganisms5 citations Open access
Semantic Scholar
Unraveling Drug Response from Pharmacogenomic Data to Advance Systems Pharmacology Decisions in Tumor Therapeutics
Konstantinos Kardamiliotis, Evangelina Karanatsiou, I. Aslanidou, E. Stergiou +2 more
2022Future Pharmacology5 citations Open access
Semantic Scholar
Differential gene methylation in paired glioblastomas suggests a role of immune response pathways in tumor progression
A. Alentorn, A. Duran-Peña, A. Malousi, Y. Marie +6 more
2015Journal of Neuro-Oncology5 citations
Semantic Scholar
Multi-Cohort Transcriptomic Profiling of Medical Gas Plasma-Treated Cancers Reveals the Role of Immunogenic Cell Death
Antonios Gkantaras, C. Kotzamanidis, Konstantinos Kyriakidis, E. Farmaki +4 more
2024Cancers4 citations Open access
Semantic Scholar
MeinteR: A framework to prioritize DNA methylation aberrations based on conformational and cis-regulatory element enrichment
A. Malousi, S. Kouidou, M. Tsagiopoulou, N. Papakonstantinou +4 more
2019Scientific Reports4 citations Open access
Semantic Scholar
Grid-Enabled Biosensor Networks for Pervasive Healthcare
I. Chouvarda, V. Koutkias, A. Malousi, N. Maglaveras
2005HealthGrid4 citations
Semantic Scholar
Omics-Derived Prognostic Biomarkers in Tongue Squamous Cell Carcinoma: A Systematic Review with Risk-of-Bias Appraisal and Translational Prioritization
I. Astreidis, Ilias Kostidis, A. Malousi, Konstantinos Paraskevopoulos +3 more
2026Current Issues in Molecular Biology3 citations
Semantic Scholar
Unraveling Cecal Alterations in Clostridioides difficile Colonized Mice through Comprehensive Metabolic Profiling
O. Deda, Emily G. Armitage, T. Mouskeftara, Melina Kachrimanidou +5 more
2024Journal of Proteome Research3 citations Open access
Semantic Scholar
Variable-length Positional Modeling for Biological Sequence Classification
A. Malousi, I. Chouvarda, V. Koutkias, S. Kouidou +1 more
2008American Medical Informatics Association Annual Symposium3 citations
Semantic Scholar
Towards implementing optimized methodologies and in-depth molecular profiling to assess the pharmacological potential of human lung fibroblast exosomes as bio-shuttles for cancer therapeutics.
A. Giannopoulos-Dimitriou, A. Saiti, E. Panteris, A. Malousi +9 more
2025European Journal of Pharmaceutical Sciences2 citations Open access
Semantic Scholar
Genomic and Phenotypic Characterization of Two High-Risk Klebsiella pneumoniae Clones (ST258-blaKPC-2 and ST11-blaNDM-1) from a Greek Tertiary Hospital
I. Frydas, Emmanouil Kouklakis, G. Meletis, A. Malousi +8 more
2025Antibiotics2 citations
Semantic Scholar
Genomic Characterization of Linezolid-Resistant Clostridioides difficile Harboring cfr Variants
Aikaterini Panou, A. Malousi, Melania Kachrimanidou
2025BioTech2 citations Open access
Semantic Scholar
The Beneficial Dietary Effect of Dried Olive Pulp on Some Nutritional Characteristics of Eggs Produced by Mid- and Late-Laying Hens
A. Dedousi, C. Kotzamanidis, Georgia Dimitropoulou, Themistoklis Sfetsas +3 more
2024Foods2 citations Open access
Semantic Scholar
Linking Exome Sequencing Data with Drug Response Aberrations
Konstantinos Kyriakidis, A. Charalampidou, P. Natsiavas, I. Vizirianakis +1 more
2019Medinfo2 citations Open access
Semantic Scholar
GREMET: An integrative tool for the prediction of mutation effects on gene regulation
P. Athanasiadis, A. Malousi, S. Kouidou, N. Maglaveras
2013Comput. Methods Programs Biomed.2 citations
Semantic Scholar
Engineering agent-mediated integration of bioinformatics analysis tools
V. Koutkias, A. Malousi, N. Maglaveras
2007Multiagent and Grid Systems2 citations Open access
Semantic Scholar
Intrinsic Splicing Profile of Human Genes Undergoing Simple Cassette Exon Events
A. Malousi, V. Koutkias, S. Kouidou, N. Maglaveras
2006International Symposium on Medical Data Analysis2 citations
Semantic Scholar

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