Matthew G. Johnson

Most-cited papers

1. HybPiper: Extracting coding sequence and introns for phylogenetics from high-throughput sequencing reads using target enrichment

   Matthew G. Johnson, E. Gardner, Yang Liu, Rafael Medina +4 more

   2016Applications in Plant Sciences727 citations Open access

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2. Evolution of niche preference in Sphagnum peat mosses

   Matthew G. Johnson, G. Granath, T. Tahvanainen, R. Pouliot +4 more

   2015Evolution; international journal of organic evolution80 citations

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3. Phylogenomic delineation of Physcomitrium (Bryophyta: Funariaceae) based on targeted sequencing of nuclear exons and their flanking regions rejects the retention of Physcomitrella, Physcomitridium and Aphanorrhegma

   Rafael Medina, Matthew G. Johnson, Yang Liu, N. Wickett +2 more

   2019Journal of Systematics and Evolution78 citations Open access

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4. Analyses of transcriptome sequences reveal multiple ancient large-scale duplication events in the ancestor of Sphagnopsida (Bryophyta).

   N. Devos, P. Szövényi, D. Weston, C. Rothfels +2 more

   2016New Phytologist40 citations Open access

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5. Interploidal hybridization and mating patterns in the Sphagnum subsecundum complex

   M. Ricca, P. Szövényi, E. Temsch, Matthew G. Johnson +1 more

   2011Molecular Ecology37 citations

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6. A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta).

   Matthew G. Johnson, C. Malley, B. Goffinet, A. Shaw +1 more

   2016Molecular Phylogenetics and Evolution31 citations Open access

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7. Local adaptations in bryophytes revisited: the genetic structure of the calcium-tolerant peatmoss Sphagnum warnstorfii along geographic and pH gradients

   Eva Mikulášková, M. Hájek, A. Veleba, Matthew G. Johnson +2 more

   2014Ecology and Evolution28 citations Open access

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8. Genetic analysis of the peatmoss Sphagnum cribrosum (Sphagnaceae) indicates independent origins of an extreme infra-specific morphology shift

   Matthew G. Johnson, B. Shaw, P. Zhou, A. J. Shaw

   201214 citations

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9. A phylogeny of the evening primrose family (Onagraceae) using a target enrichment approach with 303 nuclear loci

   Rick P. Overson, Matthew G. Johnson, Lindsey L. Bechen, Sylvia P. Kinosian +9 more

   2023BMC Ecology and Evolution10 citations Open access

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10. Elucidating the Evolutionary History of Oenothera Sect. Pachylophus (Onagraceae): A Phylogenomic Approach

    Amanda Patsis, Rick P. Overson, Krissa A. Skogen, N. Wickett +5 more

    2021Systematic Botany10 citations

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11. Molecular Phylogenetics Reveals Multiple Transitions to Self-Compatibility in a Primary Subclade of Oenothera (Onagraceae)

    Kyra N Krakos, Matthew G. Johnson, P. Hoch, W. Wagner +2 more

    2022Annals of the Missouri Botanical Garden2 citations

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12. Evidence for genetic erosion of a California native tree, Platanus racemosa, via recent, ongoing introgressive hybridization with an introduced ornamental species

    Matthew G. Johnson, Kylene Lang, P. Manos, G. Golet +1 more

    2016Conservation Genetics0 citations

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