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A. Paccanaro · SciRah

Researcher profile · Semantic Scholar

A. Paccanaro

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A. Paccanaro — researcher profile on SciRah

h-index: 15
Works: 48
Citations: 1,658

Most-cited papers

Assessing the limits of genomic data integration for predicting protein networks.
Long J. Lu, Yu Xia, A. Paccanaro, Hai-Yuan Yu +1 more
2005Genome Research231 citations Open access
Semantic Scholar
Bioinformatics Original Paper Predicting Interactions in Protein Networks by Completing Defective Cliques
Hai-Yuan Yu, A. Paccanaro, Valery Trifonov, M. Gerstein
225 citations
Semantic Scholar
Quantifying environmental adaptation of metabolic pathways in metagenomics
T. Gianoulis, J. Raes, Prianka Patel, R. Bjornson +8 more
2009Proceedings of the National Academy of Sciences of the United States of America205 citations Open access
Semantic Scholar
Spectral clustering of protein sequences
A. Paccanaro, C. Chennubhotla, James A. Casbon, M. Saqi
2003Proceedings of ... International Joint Conference on Neural Networks184 citations Open access
Semantic Scholar
Clustering of Pseudomonas aeruginosa transcriptomes from planktonic cultures, developing and mature biofilms reveals distinct expression profiles
Richard D. Waite, A. Paccanaro, Anastasia Papakonstantinopoulou, J. Hurst +3 more
2006BMC Genomics158 citations Open access
Semantic Scholar
Learning Distributed Representations of Concepts Using Linear Relational Embedding
A. Paccanaro, Geoffrey E. Hinton
2001IEEE Transactions on Knowledge and Data Engineering145 citations
Semantic Scholar
OsWRKY22, a monocot WRKY gene, plays a role in the resistance response to blast.
P. Abbruscato, T. Nepusz, L. Mizzi, M. Del Corvo +9 more
2012Molecular plant pathology96 citations Open access
Semantic Scholar
Statistical analysis of the genomic distribution and correlation of regulatory elements in the ENCODE regions.
Zheng-Dong D. Zhang, A. Paccanaro, Yutao Fu, S. Weissman +4 more
2007Genome Research72 citations Open access
Semantic Scholar
SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale
T. Nepusz, R. Sasidharan, A. Paccanaro
2010BMC Bioinformatics66 citations Open access
Semantic Scholar
An extensive analysis of disease-gene associations using network integration and fast kernel-based gene prioritization methods
G. Valentini, A. Paccanaro, Horacio Caniza, A. Romero +1 more
2014Artif. Intell. Medicine64 citations Open access
Semantic Scholar
GOssTo: a stand-alone application and a web tool for calculating semantic similarities on the Gene Ontology
Horacio Caniza, A. Romero, Samuel Heron, Hai-Xuan Yang +5 more
2014Bioinform.49 citations Open access
Semantic Scholar
A Recommender System Approach for Predicting Drug Side Effects
Diego Galeano, A. Paccanaro
2018IEEE International Joint Conference on Neural Network29 citations
Semantic Scholar
A network medicine approach to quantify distance between hereditary disease modules on the interactome
Horacio Caniza, A. Romero, A. Paccanaro
2015Scientific Reports28 citations Open access
Semantic Scholar
Learning Hierarchical Structures with Linear Relational Embedding
A. Paccanaro, Geoffrey E. Hinton
2001Neural Information Processing Systems25 citations
Semantic Scholar
A method for comparing multiple imputation techniques: a case study on the U.S. National COVID Cohort Collaborative
E. Casiraghi, R. Wong, Margaret A. Hall, Ben Coleman +31 more
2022Journal of Biomedical Informatics23 citations Open access
Semantic Scholar
Assessing the Limits of Genomic Data Integration for Predicting Protein-Protein Interactions
Long J. Lu, Yu Xia, A. Paccanaro, Hai-Yuan Yu +1 more
200512 citations
Semantic Scholar
Learning Distributed Representations by Mapping Concepts and Relations into a Linear Space
A. Paccanaro, Geoffrey E. Hinton
2000International Conference on Machine Learning9 citations
Semantic Scholar
Drug targets prediction using chemical similarity
Diego Galeano, A. Paccanaro
2016Latin American Computing Conference / Conferencia Latinoamericana En Informatica6 citations
Semantic Scholar
The Great Deceiver: miR-2392’s Hidden Role in Driving SARS-CoV-2 Infection
J. Mcdonald, F. Enguita, Deanne M. Taylor, R. Griffin +44 more
2021bioRxiv5 citations Open access
Semantic Scholar
Structural Pattern Discovery in Protein–Protein Interaction Networks
T. Nepusz, A. Paccanaro
20145 citations
Semantic Scholar
Learning Distributed Representations of Relational Data using Linear Relational Embedding
Geoffrey E. Hinton, A. Paccanaro
2001Italian Workshop on Neural Nets5 citations Open access
Semantic Scholar
Computational Selection of Transcriptomics Experiments Improves Guilt-by-Association Analyses
Prajwal Bhat, Hai-Xuan Yang, L. Bögre, Alessandra Devoto +1 more
2012PLoS ONE4 citations Open access
Semantic Scholar
GFam: a platform for automatic annotation of gene families
R. Sasidharan, T. Nepusz, D. Swarbreck, E. Huala +1 more
2012Nucleic Acids Research3 citations Open access
Semantic Scholar
Learning interpretable disease self-representations for drug repositioning
Fabrizio Frasca, Diego Galeano, Guadalupe Gonzalez, I. Laponogov +3 more
2019arXiv.org2 citations
Semantic Scholar
The Geometric Sparse Matrix Completion Model for Predicting Drug Side effects
Diego Galeano, A. Paccanaro
2019bioRxiv2 citations Open access
Semantic Scholar
Predicting the Frequency of Drug Side effects
Diego Galeano, A. Paccanaro
2019bioRxiv2 citations Open access
Semantic Scholar
Drug cocktail selection for the treatment of chagas disease: A multi-objective approach
Mateo Torres, Juan J. Cáceres, Ruben Jimenez, Victor Yubero +5 more
2017Latin American Computing Conference / Conferencia Latinoamericana En Informatica1 citations Open access
Semantic Scholar
Modeling biomolecular profiles in a graph-structured sample space for clinical outcome prediction with melanoma and ovarian cancer patients
J. Gliozzo, M. Notaro, A. Petrini, P. Perlasca +7 more
20171 citations
Semantic Scholar
Combining interactomes from multiple organisms: A case study on human-mouse
Juan J. Cáceres, A. Paccanaro
2016Latin American Computing Conference / Conferencia Latinoamericana En Informatica1 citations
Semantic Scholar
Network integration boosts disease gene prioritization
G. Valentini, A. Paccanaro, H. Vierci, A. Romero +1 more
20121 citations
Semantic Scholar
Signal Transduction Networks During Stress Responses in Arabidopsis: High-Throughput Analysis and Modelling
Alessandra Devoto, A. Paccanaro
20081 citations
Semantic Scholar
Guiding Term Reduction Through a Neural Network: Some Prelimanary Results for the Group Theory
A. Paccanaro
1995International Conference on Rewriting Techniques and Applications1 citations
Semantic Scholar
Tracking Subclonal Mutation Frequencies Throughout Lymphomagenesis Identifies Cancer Drivers in Mouse Models of Lymphoma
Philip Webster, J. Dawes, H. Dewchand, K. Takács +12 more
2017bioRxiv0 citations Open access
Semantic Scholar
SHARED DRUG TARGETS IN DRUGBANK
Horacio Caniza, Diego Galeano, A. Paccanaro
20170 citations
Semantic Scholar
Mining the biomedical literature to predict shared drug targets in DrugBank
Horacio Caniza, Diego Galeano, A. Paccanaro
2017Latin American Computing Conference / Conferencia Latinoamericana En Informatica0 citations Open access
Semantic Scholar
GOssTo & GOssToWeb: user-friendly tools for calculating semantic similarities on the Gene Ontology
Horacio Caniza Vierci, A. Romero, Samuel Heron, Hai-Xuan Yang +4 more
20130 citations
Semantic Scholar
Structural Pat 23. Structural Pattern Discovery in Protein–Protein Interaction Networks
T. Nepusz, A. Paccanaro
20130 citations
Semantic Scholar
Uncovering the dynamic architecture of circadian gene expression in plants via dimensionality reduction
Sandra P. Smieszek, Hai-Xuan Yang, A. Paccanaro, P. Devlin
20110 citations
Semantic Scholar
regulatory elements in the ENCODE regions Statistical analysis of the genomic distribution and correlation of Material Supplemental
A. Paccanaro, Yutao Fu, S. Weissman, Z. Weng +3 more
20070 citations
Semantic Scholar
Studying the behaviour of Place / Transition and Coloured Petri Nets through a formalization as Term Rewriting Systems-an implementation using LP
C. Jansen, A. Paccanaro
20070 citations
Semantic Scholar
Markov Analysis of Protein Sequence Similarities
C. Chennubhotla, A. Paccanaro
2003Italian Workshop on Neural Nets0 citations
Semantic Scholar
Value of uroflowmetry in assessing circadian changes in micturition in patients with BPH: Our experience using neural networks and probabilistic models
M. Tanello, A. Paccanaro, S. Griggi, C. Simeone
20020 citations
Semantic Scholar
Using the tree representation of terms to recognize matching with neural networks
Carlos A. Mareco, A. Paccanaro
19970 citations
Semantic Scholar
Using neural networks for recognizing matching among terms
Carlos A. Mareco, A. Paccanaro
1996Wuhan University Journal of Natural Sciences0 citations
Semantic Scholar
Studying the behaviour of petri nets through a formalization as term rewriting systems
A. Paccanaro
19940 citations
Semantic Scholar
Wavelet-based matched filtering applied to neuromagnetic signals
G. Crosta, A. Paccanaro
19900 citations
Semantic Scholar
RECOGNIZING MATCHING AMONG TERMS WITH A NEURAL NETWORK: A PRELIMINARY STUDY
Carlos A. Mareco, A. Paccanaro
0 citations
Semantic Scholar
DS-LED: A DISTRIBUTED APPLICATION F'OR THE SIMPLEX METHOD
A. Paccanaro
0 citations
Semantic Scholar

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