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Jianwen Fang · SciRah

Researcher profile · Semantic Scholar

Jianwen Fang

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Jianwen Fang — researcher profile on SciRah

h-index: 26
Works: 86
Citations: 2,059

Most-cited papers

Genome-Wide Tissue-Specific Farnesoid X Receptor Binding in Mouse Liver and Intestine
Ann M. Thomas, Steven N. Hart, B. Kong, Jianwen Fang +2 more
2010Hepatology204 citations Open access
Semantic Scholar
Structure of apolipoprotein A-I in spherical high density lipoproteins of different sizes
R. Silva, Rong Huang, Jamie Morris, Jianwen Fang +6 more
2008Proceedings of the National Academy of Sciences of the United States of America195 citations Open access
Semantic Scholar
Novel regulators of Fgf23 expression and mineralization in Hyp bone.
Shi-Guang Liu, Wen Tang, Jianwen Fang, Jinyu Ren +3 more
2009Molecular Endocrinology120 citations Open access
Semantic Scholar
A critical review of five machine learning-based algorithms for predicting protein stability changes upon mutation
Jianwen Fang
2019Briefings Bioinform.110 citations Open access
Semantic Scholar
Canine cathelicidin (K9CATH): gene cloning, expression, and biochemical activity of a novel pro-myeloid antimicrobial peptide.
Yong-Ming Sang, M. T. Ortega, K. Rune, Xi-Au Wang +7 more
2007Developmental and Comparative Immunology78 citations
Semantic Scholar
Exome sequencing reveals a thrombopoietin ligand mutation in a Micronesian family with autosomal recessive aplastic anemia.
M. Dasouki, Syed K. Rafi, Adam J. Olm-Shipman, Nathan R. Wilson +6 more
2013Blood68 citations Open access
Semantic Scholar
The role of retinoic acid in hepatic lipid homeostasis defined by genomic binding and transcriptome profiling
Yu-Qi He, Lei Gong, Yaping Fang, Q. Zhan +6 more
2013BMC Genomics67 citations Open access
Semantic Scholar
Genome-Wide Binding and Transcriptome Analysis of Human Farnesoid X Receptor in Primary Human Hepatocytes
L. Zhan, Hui-Xin Liu, Yaping Fang, B. Kong +5 more
2014PLoS ONE62 citations Open access
Semantic Scholar
Sequence-based source tracking of Escherichia coli based on genetic diversity of beta-glucuronidase.
J. Ram, Raquel P. Ritchie, Jianwen Fang, F. Gonzales +1 more
2004Journal of Environmental Quality53 citations
Semantic Scholar
PROTS-RF: A Robust Model for Predicting Mutation-Induced Protein Stability Changes
Yunqi Li, Jianwen Fang
2012PLoS ONE50 citations Open access
Semantic Scholar
Progesterone initiates Wnt-b-caten in signaling but estradiol is required for nuclear activation and synchronous proliferation of rat uterine stromal cells
V. Rider, Kazuto Isuzugawa, Meryl Twarog, S. Jones +3 more
200644 citations
Semantic Scholar
A Three-dimensional Homology Model of Lipid-free Apolipoprotein A-IV Using Cross-linking and Mass Spectrometry*
Matthew R. Tubb, R. Silva, Jianwen Fang, P. Tso +1 more
2008Journal of Biological Chemistry43 citations Open access
Semantic Scholar
A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants
Yunqi Li, C. Middaugh, Jianwen Fang
2010BMC Bioinformatics41 citations Open access
Semantic Scholar
Exposure time versus cytotoxicity for anticancer agents
David M. Evans, Jianwen Fang, T. Silvers, R. Delosh +11 more
2019Cancer Chemotherapy and Pharmacology36 citations Open access
Semantic Scholar
Identification of properties important to protein aggregation using feature selection
Yaping Fang, Shan Gao, David Tai, C. Middaugh +1 more
2013BMC Bioinformatics36 citations Open access
Semantic Scholar
Inferences of drug responses in cancer cells from cancer genomic features and compound chemical and therapeutic properties
Yong-Cui Wang, Jianwen Fang, Shilong Chen
2016Scientific Reports35 citations Open access
Semantic Scholar
PPARβ Regulates Liver Regeneration by Modulating Akt and E2f Signaling
Hui-Xin Liu, Yaping Fang, Ying Hu, F. Gonzalez +2 more
2013PLoS ONE35 citations Open access
Semantic Scholar
Filling and Mining the Reactive Metabolite Target Protein Database
R. Hanzlik, Jianwen Fang, Y. Koen
2008Chemico-Biological Interactions35 citations Open access
Semantic Scholar
Hepatocyte Nuclear Factor 4 Alpha and Farnesoid X Receptor Co-regulates Gene Transcription in Mouse Livers on a Genome-wide Scale
Ann M. Thomas, S. Hart, Guodong Li, Hong Lu +4 more
2013Pharmaceutical Research33 citations Open access
Semantic Scholar
Finding minimum gene subsets with heuristic breadth-first search algorithm for robust tumor classification
Shu-Lin Wang, Xueling Li, Jianwen Fang
2012BMC Bioinformatics32 citations Open access
Semantic Scholar
Transcription Activation by the DNA-Binding Domain of the AraC Family Protein RhaS in the Absence of Its Effector-Binding Domain
Jason R. Wickstrum, Jeff M. Skredenske, A. Kolin, Ding J. Jin +2 more
2007Journal of Bacteriology32 citations Open access
Semantic Scholar
PROTS: A fragment based protein thermo-stability potential
Yunqi Li, Jian Zhang, David Tai, C. Middaugh +2 more
2011Proteins: Structure, Function, and Bioinformatics29 citations Open access
Semantic Scholar
Discover protein sequence signatures from protein-protein interaction data
Jianwen Fang, Ryan J. Haasl, Yinghua Dong, G. Lushington
2005BMC Bioinformatics28 citations Open access
Semantic Scholar
Tightly integrated genomic and epigenomic data mining using tensor decomposition
Jianwen Fang
2018Bioinform.26 citations Open access
Semantic Scholar
Discrimination of soluble and aggregation-prone proteins based on sequence information
Yaping Fang, Jianwen Fang
2013Molecular Biosystems26 citations Open access
Semantic Scholar
The major vault protein is related to the toxic anion resistance protein (TelA) family
K. A. Suprenant, N. Bloom, Jianwen Fang, G. Lushington
2007Journal of Experimental Biology26 citations Open access
Semantic Scholar
A Network-based Analysis of Polyanion-binding Proteins Utilizing Human Protein Arrays*
Nazila Salamat-Miller, Jianwen Fang, C. Seidel, Y. Assenov +2 more
2007Journal of Biological Chemistry25 citations Open access
Semantic Scholar
Leukemia Prediction from Gene Expression Data-A Rough Set Approach
Jianwen Fang, J. Grzymala-Busse
2006International Conference on Artificial Intelligence and Soft Computing25 citations
Semantic Scholar
Bioinformatic analysis of xenobiotic reactive metabolite target proteins and their interacting partners
Jianwen Fang, Y. Koen, R. Hanzlik
2009BMC Chemical Biology22 citations Open access
Semantic Scholar
Molecular genomic features associated with in vitro response of the NCI‐60 cancer cell line panel to natural products
J. Krushkal, Simarjeet Negi, Laura M. Yee, Jason R. Evans +7 more
2020Molecular Oncology21 citations Open access
Semantic Scholar
Mining of MicroRNA Expression Data - A Rough Set Approach
Jianwen Fang, J. Grzymala-Busse
2006Rough Sets and Knowledge Technology20 citations
Semantic Scholar
Classifying Aging Genes into DNA Repair or Non-DNA Repair-Related Categories
Yaping Fang, Xin-Kun Wang, E. Michaelis, Jianwen Fang
2013International Conference on Intelligent Computing17 citations
Semantic Scholar
Age-associated changes in synaptic lipid raft proteins revealed by two-dimensional fluorescence difference gel electrophoresis
Lei Jiang, Jianwen Fang, D. Moore, N. V. Gogichaeva +3 more
2008Neurobiology of Aging17 citations Open access
Semantic Scholar
Tracker: continuous HMMER and BLAST searching
Madelaine Marchin, P. T. Kelly, Jianwen Fang
2005Bioinform.17 citations Open access
Semantic Scholar
Bioinformatic analysis of 302 reactive metabolite target proteins. Which ones are important for cell death?
R. Hanzlik, Y. Koen, Jianwen Fang
2013Toxicological Sciences16 citations Open access
Semantic Scholar
Recent Advances in the Aging Microenvironment of Breast Cancer
Xiao-pei Jiang, Haixing Shen, Xi Shang, Jianwen Fang +4 more
2022Cancers15 citations Open access
Semantic Scholar
A computational study of the inhibition mechanisms of P-glycoprotein mediated paclitaxel efflux by kinase inhibitors
J. Bender, Jianwen Fang, R. Simon
2017BMC Systems Biology15 citations Open access
Semantic Scholar
Spectral clustering of high-dimensional data via Nonnegative Matrix Factorization
Shulin Wang, Fang Chen, Jianwen Fang
2015IEEE International Joint Conference on Neural Network15 citations
Semantic Scholar
Gene polymorphism of vascular endothelial growth factor −1154 G>A is associated with hypertensive nephropathy in a Hispanic population
J. Yang, I. Hutchinson, T. Shah, Jianwen Fang +1 more
2011Molecular Biology Reports15 citations
Semantic Scholar
Comparative kinetics of cofactor association and dissociation for the human and trypanosomal S-adenosylhomocysteine hydrolases. 1. Basic features of the association and dissociation processes.
Qing-Shan Li, Sumin Cai, Ronald T. Borchardt, Jianwen Fang +3 more
2007Biochemistry14 citations
Semantic Scholar
Transcriptome profiling and genome-wide DNA binding define the differential role of fenretinide and all-trans RA in regulating the death and survival of human hepatocellular carcinoma Huh7 cells
Ying Hu, Hui-Xin Liu, Yu-Qi He, Yaping Fang +2 more
2013Biochemical Pharmacology13 citations Open access
Semantic Scholar
Function Annotation of Hepatic Retinoid x Receptor α Based on Genome-Wide DNA Binding and Transcriptome Profiling
Q. Zhan, Yaping Fang, Yu-Qi He, Hui-Xin Liu +2 more
2012PLoS ONE13 citations Open access
Semantic Scholar
Evaluation of mutual information, genetic algorithm and SVR for feature selection in QSAR regression.
Jianwen Fang, David Tai
2011Current Drug Discovery Technologies13 citations
Semantic Scholar
Effect of single-point mutations on the stability and immunogenicity of a recombinant ricin A chain subunit vaccine antigen
Justin C. Thomas, Joanne M. O’Hara, Lei Hu, Fei P. Gao +7 more
2013Human Vaccines & Immunotherapeutics12 citations Open access
Semantic Scholar
The Rationale for Targeting the NAD/NADH Cofactor Binding Site of Parasitic S-Adenosyl-L-homocysteine Hydrolase for the Design of Anti-parasitic Drugs
Sumin Cai, Qing-Shan Li, Jianwen Fang, R. Borchardt +3 more
2009Nucleosides, Nucleotides & Nucleic Acids12 citations Open access
Semantic Scholar
Molecular dynamics simulations of domain motions of substrate‐free S‐adenosyl‐ L‐homocysteine hydrolase in solution
Chen Hu, Jianwen Fang, Ronald T. Borchardt, R. Schowen +1 more
2008Proteins: Structure, Function, and Bioinformatics12 citations
Semantic Scholar
Feature Selection in Validating Mass Spectrometry Database Search Results
Jianwen Fang, Yinghua Dong, T. D. Williams, G. Lushington
2008J. Bioinform. Comput. Biol.12 citations
Semantic Scholar
Support Vector Machines in HTS Data Mining: Type I MetAPs Inhibition Study
Jianwen Fang, Yinghua Dong, G. Lushington, Q. Ye +1 more
2006Journal of biomolecular screening12 citations Open access
Semantic Scholar
Distance-dependent statistical potentials for discriminating thermophilic and mesophilic proteins
Yunqi Li, Jianwen Fang
2010Biochemical and Biophysical Research Communications - BBRC11 citations Open access
Semantic Scholar
Large-scale Protein-Protein Interaction prediction using novel kernel methods
Xue-Wen Chen, Bing Han, Jianwen Fang, Ryan J. Haasl
2008International Journal of Data Mining and Bioinformatics11 citations
Semantic Scholar

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Yaping Fang×9
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Yaping Fang — researcher profile on SciRah
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Hui-Xin Liu×5
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R. Hanzlik — researcher profile on SciRah

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