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Vishnu Dileep · SciRah

Researcher profile · Semantic Scholar

Vishnu Dileep

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Vishnu Dileep — researcher profile on SciRah

h-index: 14
Works: 22
Citations: 2,483

Most-cited papers

Topologically-associating domains are stable units of replication-timing regulation
Benjamin D. Pope, T. Ryba, Vishnu Dileep, Feng Yue +17 more
2014Nature860 citations Open access
Semantic Scholar
Integrative Detection and Analysis of Structural Variation in Cancer Genomes
Jesse R. Dixon, Jie Xu, Vishnu Dileep, Ye Zhan +33 more
2018Nature Genetics333 citations Open access
Semantic Scholar
Mouse Rif1 is a key regulator of the replication‐timing programme in mammalian cells
Daniela Cornacchia, Vishnu Dileep, J. Quivy, R. Foti +6 more
2012EMBO Journal251 citations Open access
Semantic Scholar
Nuclear architecture organized by Rif1 underpins the replication-timing program
R. Foti, Stefano Gnan, Daniela Cornacchia, T. Manke +12 more
2015Molecules and Cells176 citations Open access
Semantic Scholar
Identifying cis elements for spatio-temporal control of mammalian DNA replication
Jiao Sima, Abhijit Chakraborty, Vishnu Dileep, Marco Michalski +17 more
2018Cell173 citations Open access
Semantic Scholar
An integrative ENCODE resource for cancer genomics
Jing Zhang, Donghoon Lee, Vineet K. Dhiman, Peng Jiang +54 more
2019Nature Communications166 citations Open access
Semantic Scholar
Topologically associating domains and their long-range contacts are established during early G1 coincident with the establishment of the replication-timing program
Vishnu Dileep, F. Ay, Jiao Sima, Daniel L. Vera +2 more
2015Genome Research164 citations Open access
Semantic Scholar
Single-cell replication profiling to measure stochastic variation in mammalian replication timing
Vishnu Dileep, David M. Gilbert
2018Nature Communications102 citations Open access
Semantic Scholar
Chromatin-interaction compartment switch at developmentally regulated chromosomal domains reveals an unusual principle of chromatin folding
S. Takebayashi, Vishnu Dileep, T. Ryba, J. Dennis +1 more
2012Proceedings of the National Academy of Sciences of the United States of America61 citations Open access
Semantic Scholar
Large-Scale Chromatin Structure-Function Relationships during the Cell Cycle and Development: Insights from Replication Timing.
Vishnu Dileep, J. Rivera-Mulia, Jiao Sima, David M. Gilbert
2015Cold Spring Harbor Symposia on Quantitative Biology57 citations Open access
Semantic Scholar
High-throughput single-cell epigenomic profiling by targeted insertion of promoters (TIP-seq)
D. Bartlett, Vishnu Dileep, Tetsuya Handa, Y. Ohkawa +3 more
2021Journal of Cell Biology36 citations Open access
Semantic Scholar
Murine esBAF chromatin remodeling complex subunits BAF250a and Brg1 are necessary to maintain and reprogram pluripotency-specific replication timing of select replication domains
S. Takebayashi, Ienglam Lei, T. Ryba, Takayo Sasaki +10 more
2013Epigenetics & Chromatin32 citations Open access
Semantic Scholar
Rapid Irreversible Transcriptional Reprogramming in Human Stem Cells Accompanied by Discordance between Replication Timing and Chromatin Compartment
Vishnu Dileep, K. Wilson, Claire Marchal, X. Lyu +14 more
2019Stem Cell Reports25 citations Open access
Semantic Scholar
An Integrative Framework for Detecting Structural Variations in Cancer Genomes
Jesse R. Dixon, Jie Xu, Vishnu Dileep, Ye Zhan +33 more
2017bioRxiv15 citations Open access
Semantic Scholar
Mapping Replication Timing in Single Mammalian Cells
D. Bartlett, Vishnu Dileep, T. Baslan, David M. Gilbert
2022Current Protocols12 citations Open access
Semantic Scholar
High throughput genome-wide single cell protein:DNA binding site mapping by targeted insertion of promoters (TIP-seq)
D. Bartlett, Vishnu Dileep, S. Henikoff, David M. Gilbert
2021bioRxiv7 citations Open access
Semantic Scholar
Genome-wide Analysis of Replication Timing In Mammalian Cells: troubleshooting problems encountered when comparing different cell types
Vishnu Dileep, Ruth A. Didier, David M. Gilbert
2012Methods7 citations Open access
Semantic Scholar
The place and function of non-coding DNA in the evolution of variability
Vishnu Dileep
20096 citations Open access
Semantic Scholar
Mouse Rif 1 is a key regulator of the replication-timing program in mammalian cells
Daniela Cornacchia, Vishnu Dileep, J. Quivy, R. Foti +7 more
20122 citations
Semantic Scholar
Identification of cis elements for spatio-temporal control of DNA replication
Jiao Sima, Abhijit Chakraborty, Vishnu Dileep, Marco Michalski +15 more
2018bioRxiv1 citations Open access
Semantic Scholar
Single-cell replication profiling reveals stochastic regulation of the mammalian replication-timing program
Vishnu Dileep, David M. Gilbert
2017bioRxiv1 citations Open access
Semantic Scholar
Author Correction: Perspectives on ENCODE
F. Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian +496 more
2022Nature0 citations Open access
Semantic Scholar

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David M. Gilbert×19
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David M. Gilbert — researcher profile on SciRah
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