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J. Rittscher · SciRah

Researcher profile · Semantic Scholar

J. Rittscher

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J. Rittscher — researcher profile on SciRah

h-index: 39
Works: 160
Citations: 6,116

Most-cited papers

Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue
M. Gerdes, C. Sevinsky, A. Sood, S. Adak +27 more
2013Proceedings of the National Academy of Sciences of the United States of America728 citations Open access
Semantic Scholar
Image-based consensus molecular subtype (imCMS) classification of colorectal cancer using deep learning
K. Sirinukunwattana, E. Domingo, S. Richman, K. Redmond +20 more
2020Gut232 citations Open access
Semantic Scholar
FANet: A Feedback Attention Network for Improved Biomedical Image Segmentation
Nikhil Kumar Tomar, Debesh Jha, M. Riegler, H. Johansen +4 more
2021IEEE Transactions on Neural Networks and Learning Systems222 citations Open access
Semantic Scholar
Deep learning for detection and segmentation of artefact and disease instances in gastrointestinal endoscopy
Sharib Ali, Mariia Dmitrieva, N. Ghatwary, S. Bano +33 more
2021Medical Image Anal.164 citations Open access
Semantic Scholar
A deep learning framework for quality assessment and restoration in video endoscopy
Sharib Ali, Felix Y Zhou, A. Bailey, B. Braden +3 more
2019Medical Image Anal.156 citations Open access
Semantic Scholar
An objective comparison of detection and segmentation algorithms for artefacts in clinical endoscopy
Sharib Ali, Felix Y Zhou, B. Braden, Adam D. Bailey +25 more
2020Scientific Reports129 citations Open access
Semantic Scholar
Precision immunoprofiling by image analysis and artificial intelligence
V. Koelzer, K. Sirinukunwattana, J. Rittscher, K. Mertz
2018Virchows Archiv114 citations Open access
Semantic Scholar
The use of digital pathology and image analysis in clinical trials
R. Pell, K. Oien, M. Robinson, Helen Pitman +27 more
2019The Journal of Pathology: Clinical Research97 citations Open access
Semantic Scholar
Endoscopy artifact detection (EAD 2019) challenge dataset
Sharib Ali, Felix Y Zhou, C. Daul, B. Braden +8 more
2019arXiv.org82 citations Open access
Semantic Scholar
Artificial intelligence-based morphological fingerprinting of megakaryocytes: a new tool for assessing disease in MPN patients.
K. Sirinukunwattana, A. Aberdeen, Helen Theissen, N. Sousos +6 more
2020Blood Advances77 citations Open access
Semantic Scholar
Real-Time Polyp Detection, Localisation and Segmentation in Colonoscopy Using Deep Learning
Debesh Jha, Sharib Ali, H. Johansen, D. Johansen +3 more
2020arXiv.org65 citations
Semantic Scholar
Analysis of live cell images: Methods, tools and opportunities.
Thomas A. Nketia, Heba Sailem, G. Rohde, R. Machiraju +1 more
2017Methods64 citations Open access
Semantic Scholar
Visualization of T Cell Migration in the Spleen Reveals a Network of Perivascular Pathways that Guide Entry into T Zones
Anne Chauveau, Gabriela Pirgova, Hung-Wei Cheng, Angelina De Martin +5 more
2020Immunity62 citations Open access
Semantic Scholar
Digital pathology and artificial intelligence will be key to supporting clinical and academic cellular pathology through COVID-19 and future crises: the PathLAKE consortium perspective
L. Browning, R. Colling, E. Rakha, N. Rajpoot +5 more
2020Journal of Clinical Pathology56 citations Open access
Semantic Scholar
PolypGen: A multi-center polyp detection and segmentation dataset for generalisability assessment
Sharib Ali, Debesh Jha, N. Ghatwary, S. Realdon +10 more
2021arXiv.org46 citations
Semantic Scholar
Improving Whole Slide Segmentation Through Visual Context - A Systematic Study
K. Sirinukunwattana, N. Alham, C. Verrill, J. Rittscher
2018International Conference on Medical Image Computing and Computer-Assisted Intervention43 citations Open access
Semantic Scholar
Artificial intelligence for advance requesting of immunohistochemistry in diagnostically uncertain prostate biopsies
A. Chatrian, R. Colling, L. Browning, N. Alham +10 more
2021Modern Pathology39 citations Open access
Semantic Scholar
Automated classification of normal and Stargardt disease optical coherence tomography images using deep learning.
Mital Shah, Ana Roomans Ledo, J. Rittscher
2020Acta ophthalmologica37 citations
Semantic Scholar
Endoscopy disease detection challenge 2020
Sharib Ali, N. Ghatwary, B. Braden, D. Lamarque +6 more
2020arXiv.org32 citations
Semantic Scholar
The Potential of Artificial Intelligence to Detect Lymphovascular Invasion in Testicular Cancer
Abhisek Ghosh, K. Sirinukunwattana, Nasullah Khalid Alham, L. Browning +7 more
2021Cancers29 citations Open access
Semantic Scholar
Role of digital pathology in diagnostic histopathology in the response to COVID-19: results from a survey of experience in a UK tertiary referral hospital
L. Browning, E. Fryer, D. Roskell, K. White +3 more
2020Journal of Clinical Pathology29 citations Open access
Semantic Scholar
Ink Removal from Histopathology Whole Slide Images by Combining Classification, Detection and Image Generation Models
Sharib Ali, N. Alham, C. Verrill, J. Rittscher
2019IEEE International Symposium on Biomedical Imaging26 citations Open access
Semantic Scholar
Digitally adjusting chromogenic dye proportions in brightfield microscopy images
C. Bilgin, J. Rittscher, R. Filkins, A. Can
2012Journal of Microscopy24 citations
Semantic Scholar
Additive Angular Margin for Few Shot Learning to Classify Clinical Endoscopy Images
Sharib Ali, Binod Bhattarai, Tae-Kyun Kim, J. Rittscher
2020MLMI@MICCAI21 citations Open access
Semantic Scholar
Implementation of digital pathology into diagnostic practice: perceptions and opinions of histopathology trainees and implications for training
L. Browning, R. Colling, J. Rittscher, L. Winter +2 more
2019Journal of Clinical Pathology21 citations
Semantic Scholar
Multi-scale sensorless adaptive optics: application to stimulated emission depletion microscopy
J. Antonello, A. Barbotin, E. Chong, J. Rittscher +1 more
2020Optics Express20 citations Open access
Semantic Scholar
Microscopic Fine-Grained Instance Classification Through Deep Attention
Mengran Fan, Tapabrata (Rohan) Chakraborty, E. Chang, Yan Xu +1 more
2020International Conference on Medical Image Computing and Computer-Assisted Intervention19 citations Open access
Semantic Scholar
Cell segmentation and classification by hierarchical supervised shape ranking
A. Santamaría-Pang, J. Rittscher, M. Gerdes, D. Padfield
2015IEEE International Symposium on Biomedical Imaging17 citations
Semantic Scholar
Exploring the Correlation Between Deep Learned and Clinical Features in Melanoma Detection
Tamal Chowdhury, Angad Ripudaman Singh Bajwa, Tapabrata (Rohan) Chakraborty, J. Rittscher +1 more
2021Annual Conference on Medical Image Understanding and Analysis16 citations
Semantic Scholar
EndoUDA: A modality independent segmentation approach for endoscopy imaging
Numan Celik, Sharib Ali, Soumya Gupta, B. Braden +1 more
2021International Conference on Medical Image Computing and Computer-Assisted Intervention16 citations Open access
Semantic Scholar
Journal Pre-proof A pilot study on automatic 3D quantification of Barrett’s esophagus for risk stratification and therapy monitoring
Sharib Ali, Adam D. Bailey, S. Ash, Maryam Haghighat +5 more
202116 citations
Semantic Scholar
Image-based consensus molecular subtype classification (imCMS) of colorectal cancer using deep learning
K. Sirinukunwattana, E. Domingo, S. Richman, K. Redmond +20 more
2019bioRxiv15 citations Open access
Semantic Scholar
KCML: a machine‐learning framework for inference of multi‐scale gene functions from genetic perturbation screens
Heba Z Sailem, J. Rittscher, L. Pelkmans
2019bioRxiv15 citations Open access
Semantic Scholar
PathProfiler: Automated Quality Assessment of Retrospective Histopathology Whole-Slide Image Cohorts by Artificial Intelligence, A Case Study for Prostate Cancer Research
Maryam Haghighat, L. Browning, K. Sirinukunwattana, S. Malacrino +7 more
2021medRxiv14 citations Open access
Semantic Scholar
Fine-Grained Multi-Instance Classification in Microscopy Through Deep Attention
Mengran Fan, Tapabrata (Rohan) Chakraborty, E. Chang, Yan Xu +1 more
2020IEEE International Symposium on Biomedical Imaging14 citations
Semantic Scholar
Motion sensing superpixels (MOSES) is a systematic computational framework to quantify and discover cellular motion phenotypes
Felix Y Zhou, Carlos Ruiz-Puig, R. Owen, M. White +2 more
2019eLife14 citations Open access
Semantic Scholar
Conv2Warp: An unsupervised deformable image registration with continuous convolution and warping
Sharib Ali, J. Rittscher
2019MLMI@MICCAI14 citations Open access
Semantic Scholar
MI-UNet: Improved Segmentation in Ureteroscopy
Soumya Gupta, Sharib Ali, L. Goldsmith, B. Turney +1 more
2020IEEE International Symposium on Biomedical Imaging13 citations
Semantic Scholar
Digital Pathology Transformation in a Supraregional Germ Cell Tumour Network
R. Colling, A. Protheroe, M. Sullivan, Ruth Macpherson +24 more
2021Diagnostics12 citations Open access
Semantic Scholar
Tumour irradiation combined with vascular-targeted photodynamic therapy enhances antitumour effects in pre-clinical prostate cancer
H. Sjoberg, Y. Philippou, Anette L. Magnussen, I. Tullis +24 more
2021British Journal of Cancer12 citations Open access
Semantic Scholar
DeepScratch: Single-cell based topological metrics of scratch wound assays
A. Javer, J. Rittscher, Heba Sailem
2020Computational and Structural Biotechnology Journal12 citations Open access
Semantic Scholar
Identification of C. elegans strains using a fully convolutional neural network on behavioural dynamics
A. Javer, André E. X. Brown, I. Kokkinos, J. Rittscher
2018bioRxiv12 citations Open access
Semantic Scholar
Cell segmentation and classification via unsupervised shape ranking
A. Santamaría-Pang, Yuchi Huang, J. Rittscher
2013IEEE International Symposium on Biomedical Imaging12 citations
Semantic Scholar
Multi-class motion-based semantic segmentation for ureteroscopy and laser lithotripsy
Soumya Gupta, Sharib Ali, L. Goldsmith, B. Turney +1 more
2021Comput. Medical Imaging Graph.11 citations Open access
Semantic Scholar
Detailed molecular and immune marker profiling of archival prostate cancer samples reveals an inverse association between TMPRSS2:ERG fusion status and immune cell infiltration.
Srinivasa R. Rao, N. Alham, E. Upton, S. McIntyre +15 more
2020Journal of Molecular Diagnostics11 citations Open access
Semantic Scholar
A translational pathway of deep learning methods in GastroIntestinal Endoscopy
Sharib Ali, Mariia Dmitrieva, N. Ghatwary, S. Bano +33 more
2020arXiv.org11 citations
Semantic Scholar
Non-parametric Population Analysis of Cellular Phenotypes
Shantanu Singh, F. Janoos, T. Pécot, Enrico Caserta +4 more
2011International Conference on Medical Image Computing and Computer-Assisted Intervention11 citations Open access
Semantic Scholar
Early Detection of Liver Fibrosis Using Graph Convolutional Networks
M. Wojciechowska, S. Malacrino, Natalia Garcia Martin, H. Fehri +1 more
2021International Conference on Medical Image Computing and Computer-Assisted Intervention10 citations
Semantic Scholar
Single-cell phenomics reveals behavioural and mechanical heterogeneities underpinning collective migration during mouse anterior patterning
M. Stower, Felix Zhou, Holly Hathrell, J. Yeung +9 more
2023bioRxiv9 citations Open access
Semantic Scholar
TRAIT2D: a Software for Quantitative Analysis of Single Particle Diffusion Data
F. Reina, J. Wigg, Mariia Dmitrieva, Bela Vogler +3 more
2021bioRxiv9 citations Open access
Semantic Scholar

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