Skip to content

Home Search Authors Pakistan News Saved

SciRah

SciRah does not host or store research papers. Results come live from free, official scholarly APIs, and every paper links back to its original source.

Data sources

OpenAlex
Semantic Scholar
Crossref
CORE
arXiv
PubMed

Privacy policy Terms of service

M. Thomson · SciRah

Researcher profile · Semantic Scholar

M. Thomson

Share profile

M. Thomson — researcher profile on SciRah

h-index: 15
Works: 33
Citations: 1,733

Most-cited papers

Engineering Customized Cell Sensing and Response Behaviors Using Synthetic Notch Receptors
Leonardo Morsut, Kole T. Roybal, X. Xiong, R. Gordley +3 more
2016Cell936 citations Open access
Semantic Scholar
Highly multiplexed single-cell RNA-seq by DNA oligonucleotide tagging of cellular proteins
Jase Gehring, Jong Hwee Park, Si-Si Chen, M. Thomson +1 more
2019Nature Biotechnology123 citations Open access
Semantic Scholar
Developmental clock and mechanism of de novo polarization of the mouse embryo
Meng Zhu, Jake Cornwall-Scoones, Pei-Zhe Wang, C. Handford +3 more
2020Science96 citations Open access
Semantic Scholar
A DNA repair pathway can regulate transcriptional noise to promote cell fate transitions
Ravi V. Desai, Xinyue Chen, Benjamin Martin, S. Chaturvedi +9 more
2021Science92 citations Open access
Semantic Scholar
Stem cell-derived synthetic embryos self-assemble by exploiting cadherin codes and cortical tension
Min-fang Bao, Jake Cornwall-Scoones, Estefania Sanchez-Vasquez, A. Cox +7 more
2022Nature Cell Biology66 citations Open access
Semantic Scholar
Deep Parallel Characterization of AAV Tropism and AAV-Mediated Transcriptional Changes via Single-Cell RNA Sequencing
David Brown, M. Altermatt, T. Dobreva, Si-Si Chen +3 more
2021bioRxiv55 citations Open access
Semantic Scholar
Diffusion as a Ruler: Modeling Kinesin Diffusion as a Length Sensor for Intraflagellar Transport
Nathan L. Hendel, M. Thomson, W. Marshall
2017bioRxiv50 citations Open access
Semantic Scholar
Recovery of missing single-cell RNA-sequencing data with optimized transcriptomic references
Allan-Hermann Pool, Helen Poldsam, Si-Si Chen, M. Thomson +1 more
2023Nature Methods47 citations Open access
Semantic Scholar
Dissecting heterogeneous cell populations across drug and disease conditions with PopAlign
Si-Si Chen, P. Rivaud, J. H. Park, Tiffany Tsou +4 more
2020Proceedings of the National Academy of Sciences of the United States of America41 citations Open access
Semantic Scholar
Mapping hormone-regulated cell-cell interaction networks in the human breast at single-cell resolution
Lyndsay M. Murrow, R. J. Weber, J. Caruso, Christopher S. McGinnis +8 more
2022Cell Systems31 citations Open access
Semantic Scholar
Patterning and folding of intestinal villi by active mesenchymal dewetting
Tyler R. Huycke, Hikaru Miyazaki, Teemu J. Häkkinen, Vasudha Srivastava +13 more
2023bioRxiv30 citations Open access
Semantic Scholar
Highly Multiplexed Single-Cell RNA-seq for Defining Cell Population and Transcriptional Spaces
Jase Gehring, J. H. Park, Si-Si Chen, M. Thomson +1 more
2018bioRxiv28 citations Open access
Semantic Scholar
Bimodal function of chromatin remodeler Hmga1 in neural crest induction and Wnt-dependent emigration
Shashank V. Gandhi, Erica J. Hutchins, Krystyna Maruszko, J. H. Park +2 more
2020eLife22 citations Open access
Semantic Scholar
D-SPIN constructs gene regulatory network models from multiplexed scRNA-seq data revealing organizing principles of cellular perturbation response
Jia-Long Jiang, Si-Si Chen, Tiffany Tsou, Christopher S. McGinnis +11 more
2023bioRxiv19 citations Open access
Semantic Scholar
Minimal gene set discovery in single-cell mRNA-seq datasets with ActiveSVM
Xiaoqiao Chen, Si-Si Chen, M. Thomson
2022Nature Computational Science18 citations Open access
Semantic Scholar
Daily SARS-CoV-2 Nasal Antigen Tests Miss Infected and Presumably Infectious People Due to Viral Load Differences among Specimen Types
Alexander Viloria Winnett, R. Akana, N. Shelby, H. Davich +12 more
2023Microbiology spectrum15 citations Open access
Semantic Scholar
Integrated measurement of intracellular proteins and transcripts in single cells
Alexander M. Xu, Qian-He Liu, Kaitlyn Takata, Sarah Jeoung +5 more
2018Lab on a Chip13 citations Open access
Semantic Scholar
Transient thresholding: a mechanism enabling non-cooperative transcriptional circuitry to form a switch
K. Aull, Elizabeth J. Tanner, M. Thomson, Leor S. Weinberger
2017bioRxiv11 citations Open access
Semantic Scholar
Configurational entropy is an intrinsic driver of tissue structural heterogeneity
Vasudha Srivastava, Jennifer L Hu, J. Garbe, Boris Veytsman +6 more
2023bioRxiv9 citations Open access
Semantic Scholar
Single cell profiling of capillary blood enables out of clinic human immunity studies
T. Dobreva, David Brown, J. H. Park, M. Thomson
2020Scientific Reports8 citations Open access
Semantic Scholar
Enhanced recovery of single-cell RNA-sequencing reads for missing gene expression data
Allan-Hermann Pool, Helen Poldsam, Si-Si Chen, M. Thomson +1 more
2022bioRxiv6 citations Open access
Semantic Scholar
Commensal bacteria promote type I interferon signaling to maintain immune tolerance
A. V. Ayala, Chia-Yun Hsu, Kazuhiko Matsuo, Ekaterina Buzun +7 more
2021bioRxiv5 citations Open access
Semantic Scholar
Dissecting heterogeneous cell-populations across signaling and disease conditions with PopAlign
Si-Si Chen, J. H. Park, Tiffany Tsou, P. Rivaud +4 more
2018bioRxiv4 citations Open access
Semantic Scholar
Active feature selection discovers minimal gene sets for classifying cell types and disease states with single-cell mRNA-seq data
Xiaoqiao Chen, Si-Si Chen, M. Thomson
2021bioRxiv3 citations Open access
Semantic Scholar
Discovery of a Cellular Mechanism Regulating Transcriptional Noise
Ravi V. Desai, Maike M. K. Hansen, Benjamin Martin, Chen Yu +3 more
2020bioRxiv3 citations Open access
Semantic Scholar
Author Correction: Stem cell-derived synthetic embryos self-assemble by exploiting cadherin codes and cortical tension
Min-fang Bao, Jake Cornwall-Scoones, Estefania Sanchez-Vasquez, A. Cox +7 more
2023Nature Cell Biology2 citations Open access
Semantic Scholar
Control of spatio-temporal patterning via cell density in a multicellular synthetic gene circuit
M. Santorelli, Pranav S. Bhamidipati, Andriu Kavanagh, Victoria A. MacKrell +3 more
2022bioRxiv2 citations Open access
Semantic Scholar
Therapeutic algebra of immunomodulatory drug responses at single-cell resolution
Jia-Long Jiang, Si-Si Chen, Tiffany Tsou, Christopher S. McGinnis +9 more
20221 citations
Semantic Scholar
A Computational and Experimental Platform for Detecting Full Transcriptome Cell Type Tropism of Lowly Expressed Barcoded and Pooled AAV Variants via Single-Cell RNA Sequencing
David Brown, M. Altermatt, T. Dobreva, J. H. Park +6 more
20200 citations
Semantic Scholar
Author response: Bimodal function of chromatin remodeler Hmga1 in neural crest induction and Wnt-dependent emigration
Shashank V. Gandhi, Erica J. Hutchins, Krystyna Maruszko, J. H. Park +2 more
20200 citations Open access
Semantic Scholar
Enabling out-of-clinic human immunity studies via single-cell profiling of capillary blood
T. Dobreva, David Brown, J. H. Park, M. Thomson
2020bioRxiv0 citations Open access
Semantic Scholar
In-Depth Parallel Profiling of Tissue and Cell-Type Tropism of AAV Variants by Single-Cell RNA Sequencing
M. Altermatt, David Brown, T. Dobreva, Min J. Jang +4 more
20200 citations
Semantic Scholar
Designing signaling environments to steer transcriptional diversity in neural progenitor cell populations
Si-Si Chen, J. H. Park, Jia-Long Jiang, Tiffany Tsou +2 more
2019bioRxiv0 citations Open access
Semantic Scholar

Frequent co-authors

Invite them to SciRah by sharing their profile.

Si-Si Chen×13
Invite
Si-Si Chen — researcher profile on SciRah
J. H. Park×10
Invite
J. H. Park — researcher profile on SciRah
David Brown×5
Invite
David Brown — researcher profile on SciRah
T. Dobreva×5
Invite
T. Dobreva — researcher profile on SciRah

×5

Invite

P. Rivaud — researcher profile on SciRah

Tiffany Tsou×5

Invite

Tiffany Tsou — researcher profile on SciRah

Zev J. Gartner×5

Invite

Zev J. Gartner — researcher profile on SciRah

Jake Cornwall-Scoones×4

Invite

Jake Cornwall-Scoones — researcher profile on SciRah

Allan-Hermann Pool×4

Invite

Allan-Hermann Pool — researcher profile on SciRah

Christopher S. McGinnis×4

Invite

Christopher S. McGinnis — researcher profile on SciRah

M. Zernicka-Goetz×3

Invite

M. Zernicka-Goetz — researcher profile on SciRah

Leor S. Weinberger×3

Invite

Leor S. Weinberger — researcher profile on SciRah