Li-Wei Wang

Most-cited papers

Clinical Information Extraction Applications: A Literature Review
Yan-Shan Wang, Li-Wei Wang, Majid Rastegar-Mojarad, S. Moon +7 more
2017Journal of Biomedical Informatics907 citations Open access
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A Comparison of Word Embeddings for the Biomedical Natural Language Processing
Yan-Shan Wang, Sijia Liu, N. Afzal, Majid Rastegar-Mojarad +4 more
2018Journal of Biomedical Informatics362 citations Open access
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A clinical text classification paradigm using weak supervision and deep representation
Yanshan Wang, S. Sohn, Sijia Liu, Fei-Chen Shen +4 more
2019BMC Medical Informatics and Decision Making339 citations Open access
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Characterizing Long COVID: Deep Phenotype of a Complex Condition
Rachel R. Deer, Madeline Rock, N. Vasilevsky, Leigh Carmody +48 more
2021medRxiv180 citations Open access
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Clinical Concept Extraction: a Methodology Review
S. Fu, David Chen, Huan He, Sijia Liu +9 more
2020Journal of Biomedical Informatics166 citations Open access
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MedSTS: a resource for clinical semantic textual similarity
Yan-Shan Wang, N. Afzal, S. Fu, Li-Wei Wang +3 more
2018Language Resources and Evaluation139 citations Open access
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Systematic Analysis of Adverse Event Reports for Sex Differences in Adverse Drug Events
Yue Yu, Jun Chen, Ding-Cheng Li, Li-Wei Wang +2 more
2016Scientific Reports132 citations Open access
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Deep Phenotyping on Electronic Health Records Facilitates Genetic Diagnosis by Clinical Exomes.
Jung H. Son, Gangcai Xie, Chi Yuan, Lyudmila Ena +16 more
2018American Journal of Human Genetics119 citations Open access
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CancerBERT: a cancer domain-specific language model for extracting breast cancer phenotypes from electronic health records
Sicheng Zhou, Nan Wang, Li-Wei Wang, Hong-Fang Liu +1 more
2022J. Am. Medical Informatics Assoc.57 citations Open access
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Computational drug repurposing based on electronic health records: a scoping review
N. Zong, Andrew Wen, S. Moon, S. Fu +9 more
2022npj Digital Medicine55 citations Open access
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Natural language processing for populating lung cancer clinical research data
Li-Wei Wang, L. Luo, Yan-Shan Wang, J. Wampfler +2 more
2019BMC Medical Informatics and Decision Making46 citations Open access
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Assessment of Electronic Health Record for Cancer Research and Patient Care Through a Scoping Review of Cancer Natural Language Processing
Li-Wei Wang, S. Fu, Andrew Wen, Xiao-Yang Ruan +10 more
2022JCO Clinical Cancer Informatics42 citations Open access
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Proton Pump Inhibitors and the Risk for Fracture at Specific Sites: Data Mining of the FDA Adverse Event Reporting System
Li-Wei Wang, Mei Li, Yuying Cao, Zheng-Qi Han +4 more
2017Scientific Reports39 citations Open access
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Discovery of Noncancer Drug Effects on Survival in Electronic Health Records of Patients With Cancer: A New Paradigm for Drug Repurposing
Yonghui Wu, J. Warner, Li-Wei Wang, Min Jiang +9 more
2019JCO Clinical Cancer Informatics38 citations Open access
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HPO2Vec+: Leveraging Heterogeneous Knowledge Resources to Enrich Node Embeddings for the Human Phenotype Ontology
Fei-Chen Shen, Su-Yuan Peng, Yadan Fan, Andrew Wen +4 more
2019Journal of Biomedical Informatics37 citations Open access
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Dependency and AMR Embeddings for Drug-Drug Interaction Extraction from Biomedical Literature
Yan-Shan Wang, Sijia Liu, Majid Rastegar-Mojarad, Li-Wei Wang +3 more
2017ACM International Conference on Bioinformatics, Computational Biology and Biomedicine37 citations Open access
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Utilization of Electronic Medical Records and Biomedical Literature to Support the Diagnosis of Rare Diseases Using Data Fusion and Collaborative Filtering Approaches
Fei-Chen Shen, Sijia Liu, Yanshan Wang, Andrew Wen +2 more
2018JMIR Medical Informatics36 citations Open access
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Large Language Models Struggle in Token-Level Clinical Named Entity Recognition
Qiuhao Lu, Rui Li, Andrew Wen, Jin-Lian Wang +2 more
2024AMIA ... Annual Symposium proceedings. AMIA Symposium35 citations
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Leveraging Collaborative Filtering to Accelerate Rare Disease Diagnosis
Fei-Chen Shen, Sijia Liu, Yanshan Wang, Li-Wei Wang +2 more
2017American Medical Informatics Association Annual Symposium35 citations
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Standardizing adverse drug event reporting data
Li-Wei Wang, Guo-Qian Jiang, Ding-Cheng Li, Hong-Fang Liu
2014Journal of Biomedical Semantics34 citations Open access
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Sex differences in type and occurrence of adverse reactions to opioid analgesics: a retrospective cohort study
Guilherme S. Lopes, S. Bielinski, A. Moyer, Debra J. Jacobson +7 more
2021BMJ Open33 citations Open access
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Comparison of Three Information Sources for Smoking Information in Electronic Health Records
Li-Wei Wang, Xiao-Yang Ruan, Ping Yang, Hong-Fang Liu
2016Cancer Informatics33 citations Open access
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Time event ontology (TEO): to support semantic representation and reasoning of complex temporal relations of clinical events
Fang Li, Jingcheng Du, Y. He, Hsing-yi Song +10 more
2020J. Am. Medical Informatics Assoc.32 citations Open access
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BioCreative/OHNLP Challenge 2018
Majid Rastegar-Mojarad, Sijia Liu, Yan-Shan Wang, N. Afzal +4 more
2018ACM International Conference on Bioinformatics, Computational Biology and Biomedicine32 citations
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Patient Portal Messaging for Asynchronous Virtual Care During the COVID-19 Pandemic: Retrospective Analysis
Ming Huang, Aditya Khurana, George M. Mastorakos, Andrew Wen +12 more
2021JMIR Human Factors31 citations Open access
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Detecting Pharmacovigilance Signals Combining Electronic Medical Records With Spontaneous Reports: A Case Study of Conventional Disease-Modifying Antirheumatic Drugs for Rheumatoid Arthritis
Li-Wei Wang, Majid Rastegar-Mojarad, Zhiliang Ji, Si-Jia Liu +7 more
2018Frontiers in Pharmacology31 citations Open access
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A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology
Y. He, Hong Yu, A. Huffman, A. Lin +39 more
2022Journal of Biomedical Semantics30 citations Open access
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Implementation of a Cohort Retrieval System for Clinical Data Repositories Using the Observational Medical Outcomes Partnership Common Data Model: Proof-of-Concept System Validation
Sijia Liu, Yanshan Wang, Andrew Wen, Li-Wei Wang +5 more
2019JMIR Medical Informatics29 citations Open access
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Ensembles of Natural Language Processing Systems for Portable Phenotyping Solutions
Cong Liu, Casey N. Ta, James R. Rogers, Ziran Li +10 more
2019Journal of Biomedical Informatics26 citations Open access
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Detecting Lifestyle Risk Factors for Chronic Kidney Disease With Comorbidities: Association Rule Mining Analysis of Web-Based Survey Data
Su-Yuan Peng, Fei-Chen Shen, Andrew Wen, Li-Wei Wang +3 more
2019Journal of Medical Internet Research26 citations Open access
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Phenotypic Analysis of Clinical Narratives Using Human Phenotype Ontology
Fei-Chen Shen, Li-Wei Wang, Hong-Fang Liu
2017Medinfo26 citations Open access
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Rare disease knowledge enrichment through a data-driven approach
Fei-Chen Shen, Yi-Qing Zhao, Li-Wei Wang, M. Mojarad +3 more
2019BMC Medical Informatics and Decision Making25 citations Open access
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Recommended practices and ethical considerations for natural language processing‐assisted observational research: A scoping review
S. Fu, Li-Wei Wang, S. Moon, N. Zong +7 more
2022Clinical and Translational Science21 citations Open access
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Ontology-based systematical representation and drug class effect analysis of package insert-reported adverse events associated with cardiovascular drugs used in China
Li-Wei Wang, Mei Li, Jiangan Xie, Yuying Cao +2 more
2017Scientific Reports21 citations Open access
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A Text-Mining Framework for Supporting Systematic Reviews
Ding-Cheng Li, Zhen Wang, Li-Wei Wang, S. Sohn +3 more
2016American journal of information management21 citations
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An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C)
Sijia Liu, Andrew Wen, Li-Wei Wang, Huan He +24 more
2021J. Am. Medical Informatics Assoc.19 citations Open access
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Attention Neural Model for Temporal Relation Extraction
Si-Jia Liu, Li-Wei Wang, Vipin Chaudhary, Hong-Fang Liu
2019Proceedings of the 2nd Clinical Natural Language Processing Workshop19 citations Open access
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A cross-institutional evaluation on breast cancer phenotyping NLP algorithms on electronic health records
Sicheng Zhou, Nan Wang, Li-Wei Wang, Ju Sun +3 more
2023Computational and Structural Biotechnology Journal18 citations Open access
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Systematic Analysis of Free-Text Family History in Electronic Health Record
Yanshan Wang, Li-Wei Wang, Majid Rastegar-Mojarad, Sijia Liu +2 more
2017AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science18 citations
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Need of Informatics in Designing Interoperable Clinical Registries
Majid Rastegar-Mojarad, S. Sohn, Li-Wei Wang, Fei-Chen Shen +3 more
2017Int. J. Medical Informatics17 citations Open access
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Prioritizing Adverse Drug Reaction and Drug Repositioning Candidates Generated by Literature-Based Discovery
Majid Rastegar-Mojarad, Ravikumar Komandur Elayavilli, Li-Wei Wang, R. Prasad +1 more
2016ACM International Conference on Bioinformatics, Computational Biology and Biomedicine17 citations
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Quality assessment of functional status documentation in EHRs across different healthcare institutions
S. Fu, M. Vassilaki, Omar A. Ibrahim, R. C. Petersen +7 more
2022Frontiers in Digital Health15 citations Open access
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Developing Customizable Cancer Information Extraction Modules for Pathology Reports Using CLAMP
Ergin Soysal, J. Warner, Jing-Qi Wang, Min Jiang +14 more
2019Medinfo14 citations Open access
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Constructing Node Embeddings for Human Phenotype Ontology to Assist Phenotypic Similarity Measurement
Fei-Chen Shen, Sijia Liu, Yanshan Wang, Li-Wei Wang +3 more
20182018 IEEE International Conference on Healthcare Informatics Workshop (ICHI-W)14 citations
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Recommending Education Materials for Diabetic Questions Using Information Retrieval Approaches
Yu-Qun Zeng, Yan-Shan Wang, Fei-Chen Shen, Sijia Liu +4 more
2017American Medical Informatics Association Annual Symposium14 citations Open access
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Correlating Lab Test Results in Clinical Notes with Structured Lab Data: A Case Study in HbA1c and Glucose
Sijia Liu, Li-Wei Wang, Donna M. Ihrke, Vipin Chaudhary +3 more
2017Summit on Clinical Research Informatics13 citations
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Achievability to Extract Specific Date Information for Cancer Research
Li-Wei Wang, J. Wampfler, A. Dispenzieri, Hua Xu +2 more
2019American Medical Informatics Association Annual Symposium12 citations
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Using Human Phenotype Ontology for Phenotypic Analysis of Clinical Notes
Fei-Chen Shen, Li-Wei Wang, Hong-Fang Liu
2017Medinfo12 citations
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Cancer based pharmacogenomics network supported with scientific evidences: from the view of drug repurposing
Li-Wei Wang, Hong-Fang Liu, C. Chute, Qian Zhu
2015BioData Mining11 citations Open access
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Midwest rural‐urban disparities in use of patient online services for COVID‐19
Ming Huang, Andrew Wen, Huan He, Li-Wei Wang +12 more
2022Journal of Rural Health10 citations Open access
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