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J. Thrash · SciRah

Researcher profile · Semantic Scholar

J. Thrash

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J. Thrash — researcher profile on SciRah

h-index: 27
Works: 102
Citations: 4,463

Most-cited papers

Implications of streamlining theory for microbial ecology
S. Giovannoni, J. Thrash, B. Temperton
2014The ISME Journal770 citations Open access
Semantic Scholar
High proportions of bacteria and archaea across most biomes remain uncultured
A. Steen, A. Crits-Christoph, P. Carini, K. DeAngelis +3 more
2019The ISME Journal392 citations Open access
Semantic Scholar
Abundant SAR11 viruses in the ocean
Yanlin Zhao, B. Temperton, J. Thrash, M. Schwalbach +6 more
2013Nature328 citations
Semantic Scholar
Streamlining and Core Genome Conservation among Highly Divergent Members of the SAR11 Clade
J. Grote, J. Thrash, M. Huggett, Z. Landry +3 more
2012mBio288 citations Open access
Semantic Scholar
One Carbon Metabolism in SAR11 Pelagic Marine Bacteria
Jing Sun, L. Steindler, J. Thrash, K. Halsey +4 more
2011PLoS ONE224 citations Open access
Semantic Scholar
High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences
K. Vergin, B. Beszteri, A. Monier, J. Thrash +5 more
2013The ISME Journal180 citations Open access
Semantic Scholar
Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade
J. Thrash, A. Boyd, M. Huggett, J. Grote +6 more
2011Scientific Reports171 citations Open access
Semantic Scholar
Cultivation and genomics of the first freshwater SAR11 (LD12) isolate
M. Henson, V. Lanclos, B. Faircloth, J. Thrash
2017The ISME Journal141 citations Open access
Semantic Scholar
Status of the Archaeal and Bacterial Census: an Update
P. Schloss, R. Girard, Thomas M. Martin, Joshua Edwards +1 more
2016mBio141 citations Open access
Semantic Scholar
Discovery of a SAR11 growth requirement for thiamin’s pyrimidine precursor and its distribution in the Sargasso Sea
P. Carini, E. Campbell, J. Morré, S. Saňudo-Wilhelmy +5 more
2014The ISME Journal141 citations Open access
Semantic Scholar
The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol
Jing Sun, Jonathan D. Todd, J. Thrash, Yan-Ping L. Qian +14 more
2016Nature Microbiology137 citations Open access
Semantic Scholar
Roadmap for naming uncultivated Archaea and Bacteria
A. Murray, J. Freudenstein, S. Gribaldo, R. Hatzenpichler +61 more
2020Nature Microbiology131 citations Open access
Semantic Scholar
New rRNA Gene-Based Phylogenies of the Alphaproteobacteria Provide Perspective on Major Groups, Mitochondrial Ancestry and Phylogenetic Instability
Matteo P. Ferla, J. Thrash, S. Giovannoni, W. Patrick
2013PLoS ONE116 citations Open access
Semantic Scholar
Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
J. Thrash, B. Temperton, B. Swan, Z. Landry +4 more
2014The ISME Journal111 citations Open access
Semantic Scholar
SAR11 lipid renovation in response to phosphate starvation
P. Carini, B. V. Van Mooy, J. Thrash, Angelicque E. White +4 more
2015Proceedings of the National Academy of Sciences of the United States of America100 citations Open access
Semantic Scholar
Artificial Seawater Media Facilitate Cultivating Members of the Microbial Majority from the Gulf of Mexico
M. Henson, D. Pitre, J. Weckhorst, V. Lanclos +2 more
2016Msphere86 citations Open access
Semantic Scholar
The first decade of scientific insights from the Deepwater Horizon oil release
E. Kujawinski, C. Reddy, R. Rodgers, J. Thrash +2 more
2020Nature Reviews Earth & Environment84 citations
Semantic Scholar
Metabolic Roles of Uncultivated Bacterioplankton Lineages in the Northern Gulf of Mexico “Dead Zone”
J. Thrash, K. Seitz, B. Baker, B. Temperton +4 more
2016mBio80 citations Open access
Semantic Scholar
Proteomic and Transcriptomic Analyses of “Candidatus Pelagibacter ubique” Describe the First PII-Independent Response to Nitrogen Limitation in a Free-Living Alphaproteobacterium
Daniel Patrick Smith, J. Thrash, C. Nicora, M. Lipton +4 more
2013mBio64 citations Open access
Semantic Scholar
Biogeochemical and Microbial Variation across 5500 km of Antarctic Surface Sediment Implicates Organic Matter as a Driver of Benthic Community Structure
D. Learman, M. Henson, J. Thrash, B. Temperton +4 more
2016Frontiers in Microbiology57 citations Open access
Semantic Scholar
Nutrient dynamics and stream order influence microbial community patterns along a 2914 kilometer transect of the Mississippi River
M. Henson, J. Hanssen, G. Spooner, Patrick Fleming +3 more
201855 citations Open access
Semantic Scholar
Biological cycling of volatile organic carbon by phytoplankton and bacterioplankton
K. Halsey, Stephen J. Giovannoni, M. Graus, Yanlin Zhao +4 more
201755 citations Open access
Semantic Scholar
A freshwater cyanophage whose genome indicates close relationships to photosynthetic marine cyanomyophages
T. Dreher, Nathan M. Brown, Connie S. Bozarth, Andrew D. Schwartz +5 more
2011Environmental Microbiology54 citations Open access
Semantic Scholar
Archaeal enrichment in the hypoxic zone in the northern Gulf of Mexico.
Lauren E. Gillies, J. Thrash, S. Derada, N. Rabalais +1 more
2015Environmental Microbiology48 citations Open access
Semantic Scholar
Trace Metal Acquisition by Marine Heterotrophic Bacterioplankton with Contrasting Trophic Strategies
S. Hogle, J. Thrash, Christopher L. Dupont, K. Barbeau
2016Applied and Environmental Microbiology46 citations Open access
Semantic Scholar
Expanding the diversity of bacterioplankton isolates and modeling isolation efficacy with large scale dilution-to-extinction cultivation
M. Henson, V. Lanclos, D. Pitre, J. Weckhorst +4 more
2020bioRxiv31 citations Open access
Semantic Scholar
Genome Sequence of Lentisphaera araneosa HTCC2155T, the Type Species of the Order Lentisphaerales in the Phylum Lentisphaerae
J. Thrash, Jang-Cheon Cho, K. Vergin, Robert M. Morris +1 more
2010Journal of Bacteriology31 citations Open access
Semantic Scholar
Culturing the Uncultured: Risk versus Reward
J. Thrash
2019mSystems26 citations Open access
Semantic Scholar
Phylum XVII. Acidobacteria phyl. nov.
J. Thrash, John D. Coates
201025 citations
Semantic Scholar
Ecophysiology and genomics of the brackish water adapted SAR11 subclade IIIa
V. Lanclos, Anna N. Rasmussen, C. Kojima, Chuankai Cheng +4 more
2022bioRxiv24 citations Open access
Semantic Scholar
The AEGEAN-169 clade of bacterioplankton is synonymous with SAR11 subclade V (HIMB59) and metabolically distinct
Eric W. Getz, V. Lanclos, C. Kojima, Chuankai Cheng +5 more
2023bioRxiv22 citations Open access
Semantic Scholar
Extent of the annual Gulf of Mexico hypoxic zone influences microbial community structure
L. G. Campbell, J. Thrash, N. Rabalais, Olivia U. Mason
2018bioRxiv22 citations Open access
Semantic Scholar
RRAP: RPKM Recruitment Analysis Pipeline
C. Kojima, Eric W. Getz, J. Thrash
2022Microbiology Resource Announcements21 citations Open access
Semantic Scholar
Mechanisms driving genome reduction of a novel Roseobacter lineage
Xiaoyuan Feng, Xiao Chu, Yang Qian, M. Henson +6 more
2021The ISME Journal21 citations Open access
Semantic Scholar
Genome Sequences of Strains HTCC2148 and HTCC2080, Belonging to the OM60/NOR5 Clade of the Gammaproteobacteria
J. Thrash, Jang-Cheon Cho, S. Ferriera, Justin H. Johnson +2 more
2010Journal of Bacteriology20 citations Open access
Semantic Scholar
Metagenomics and metatranscriptomics reveal broadly distributed, active, novel methanotrophs in the Gulf of Mexico hypoxic zone and in the marine water column
Kathryn Howe, K. Seitz, L. G. Campbell, B. Baker +5 more
2022FEMS Microbiology Ecology17 citations Open access
Semantic Scholar
Genome Sequences of Oceanicola granulosus HTCC2516T and Oceanicola batsensis HTCC2597T
J. Thrash, Jang-Cheon Cho, K. Vergin, S. Giovannoni
2010Journal of Bacteriology17 citations Open access
Semantic Scholar
sparse-growth-curve: a Computational Pipeline for Parsing Cellular Growth Curves with Low Temporal Resolution
Chuankai Cheng, J. Thrash
2021Microbiology Resource Announcements16 citations Open access
Semantic Scholar
Metagenomic Assembly and Prokaryotic Metagenome-Assembled Genome Sequences from the Northern Gulf of Mexico “Dead Zone”
J. Thrash, B. Baker, K. Seitz, B. Temperton +4 more
2018Microbiology Resource Announcements14 citations Open access
Semantic Scholar
Flexible genomic island conservation across freshwater and marine Methylophilaceae
Paul Layoun, M. López-Pérez, J. Haro-Moreno, Markus Haber +5 more
2024The ISME Journal13 citations Open access
Semantic Scholar
Expanding the Diversity of Bacterioplankton Isolates and Modeling Isolation Efficacy with Large-Scale Dilution-to-Extinction Cultivation
M. Henson, V. Lanclos, D. Pitre, J. Weckhorst +4 more
2020Applied and Environmental Microbiology13 citations Open access
Semantic Scholar
Genome Sequences of Pelagibaca bermudensis HTCC2601T and Maritimibacter alkaliphilus HTCC2654T, the Type Strains of Two Marine Roseobacter Genera
J. Thrash, Jang-Cheon Cho, S. Ferriera, Justin H. Johnson +2 more
2010Journal of Bacteriology13 citations Open access
Semantic Scholar
Ecophysiology of the Cosmopolitan OM252 Bacterioplankton (Gammaproteobacteria)
Emily R. Savoie, V. Lanclos, M. Henson, Chuankai Cheng +5 more
2021bioRxiv11 citations Open access
Semantic Scholar
Towards culturing the microbe of your choice.
J. Thrash
2020Environmental Microbiology Reports11 citations Open access
Semantic Scholar
Genome Sequence of the Marine Janibacter Sp. Strain HTCC2649
J. Thrash, Jang-Cheon Cho, Anthony D. Bertagnolli, S. Ferriera +3 more
2010Journal of Bacteriology11 citations Open access
Semantic Scholar
Microbial ecology of northern Gulf of Mexico estuarine waters
M. Henson, J. Thrash
2024mSystems8 citations
Semantic Scholar
Metagenome-Assembled Genome Sequence of Kapabacteriales Bacterium Strain Clear-D13, Assembled from a Harmful Algal Bloom Enrichment Culture
Shaikha Al Saud, Kyra M. Florea, Eric A. Webb, J. Thrash
2020Microbiology Resource Announcements8 citations Open access
Semantic Scholar
Draft Genome Sequence of Strain LSUCC0135, an Early Diverging Member of the Order Methylophilales in the Phylum Betaproteobacteria
V. Lanclos, M. Henson, David M. Pitre, J. Thrash
2016Genome Announcements6 citations Open access
Semantic Scholar
Author Correction: Roadmap for naming uncultivated Archaea and Bacteria
A. Murray, J. Freudenstein, S. Gribaldo, R. Hatzenpichler +61 more
2020Nature Microbiology5 citations Open access
Semantic Scholar
New isolates refine the ecophysiology of the Roseobacter CHAB-I-5 lineage
V. Lanclos, Xiao-Yuan Feng, Chuankai Cheng, Ming-Yu Yang +9 more
2024bioRxiv4 citations Open access
Semantic Scholar

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