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D. Bhattacharya · SciRah

Researcher profile · Semantic Scholar

D. Bhattacharya

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D. Bhattacharya — researcher profile on SciRah

h-index: 84
Works: 360
Citations: 22K

Most-cited papers

Insights into the Evolution of Multicellularity from the Sea Lettuce Genome.
O. De Clerck, Shu-min Kao, Kenny A. Bogaert, Jonas Blomme +32 more
2018Current Biology177 citations Open access
Semantic Scholar
Horizontal Gene Transfer in Eukaryotes: Not if, but How Much?
J. Van Etten, D. Bhattacharya
2020Trends in Genetics145 citations Open access
Semantic Scholar
Pyropia yezoensis genome reveals diverse mechanisms of carbon acquisition in the intertidal environment
Dong-Mei Wang, Xinzi Yu, Kuipeng Xu, Gui-Qi Bi +24 more
2020Nature Communications109 citations Open access
Semantic Scholar
Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium
Raúl A. González-Pech, T. Stephens, Yi-Bi Chen, A. Mohamed +9 more
2021BMC Biology95 citations Open access
Semantic Scholar
Analysis of the Draft Genome of the Red Seaweed Gracilariopsis chorda Provides Insights into Genome Size Evolution in Rhodophyta
Jun-Mo Lee, E. Yang, L. Graf, Ji Hyun Yang +15 more
2018Molecular biology and evolution95 citations Open access
Semantic Scholar
Building consensus around the assessment and interpretation of Symbiodiniaceae diversity
S. W. Davies, Matthew H. Gamache, L. Howe-Kerr, N. Kriefall +57 more
2023PeerJ94 citations Open access
Semantic Scholar
Genomes of the dinoflagellate Polarella glacialis encode tandemly repeated single-exon genes with adaptive functions
T. Stephens, Raúl A. González-Pech, Yuanyuan Cheng, Amin R. Mohamed +4 more
2020BMC Biology85 citations Open access
Semantic Scholar
The Algal Revolution.
J. Brodie, C. Chan, O. De Clerck, J. M. Cock +8 more
2017Trends in Plant Science81 citations
Semantic Scholar
Adaptation to Extreme Antarctic Environments Revealed by the Genome of a Sea Ice Green Alga.
Zhenhua Zhang, Chang-Feng Qu, Kai-Jian Zhang, Ying-Ying He +20 more
2020Current Biology72 citations
Semantic Scholar
The genomes of polyextremophilic cyanidiales contain 1% horizontally transferred genes with diverse adaptive functions
Alessandro W. Rossoni, Dana C. Price, Mark Seger, D. Lyska +3 more
2019bioRxiv72 citations Open access
Semantic Scholar
Genome-wide signatures of adaptation to extreme environments in red algae
C. Cho, Seung In Park, Tzu-Yen Huang, Yong-Sung Lee +5 more
2023Nature Communications70 citations Open access
Semantic Scholar
Metabolomic shifts associated with heat stress in coral holobionts
Amanda Williams, E. Chiles, Dennis Conetta, J. Pathmanathan +4 more
2021Science Advances69 citations Open access
Semantic Scholar
Genome analysis of the rice coral Montipora capitata
A. Shumaker, H. Putnam, H. Qiu, Dana C. Price +6 more
2019Scientific Reports59 citations Open access
Semantic Scholar
Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida
Camilla Ferrari, S. Proost, Marcin Janowski, J. Becker +8 more
2019Nature Communications57 citations Open access
Semantic Scholar
Genomic Analysis of Picochlorum Species Reveals How Microalgae May Adapt to Variable Environments
Fatima Foflonker, Devin Mollegard, M. Ong, H. Yoon +1 more
2018Molecular biology and evolution54 citations Open access
Semantic Scholar
Phytoplankton pangenome reveals extensive prokaryotic horizontal gene transfer of diverse functions
Xiao Fan, H. Qiu, Wentao Han, Yi-Tao Wang +4 more
2020Science Advances53 citations Open access
Semantic Scholar
Core genes in diverse dinoflagellate lineages include a wealth of conserved dark genes with unknown functions
T. Stephens, M. Ragan, D. Bhattacharya, C. Chan
2018Scientific Reports52 citations Open access
Semantic Scholar
Terpene Biosynthesis in Red Algae Is Catalyzed by Microbial Type But Not Typical Plant Terpene Synthases1[OPEN]
Guo Wei, Q. Jia, Xin-Lu Chen, T. Köllner +4 more
2018Plant Physiology50 citations Open access
Semantic Scholar
What's in a name? The case of cyanobacteria
F. Garcia-Pichel, J. Zehr, D. Bhattacharya, H. Pakrasi
2019Journal of Phycology48 citations Open access
Semantic Scholar
Genome Evolution of Coral Reef Symbionts as Intracellular Residents.
Raúl A. González-Pech, D. Bhattacharya, M. Ragan, C. Chan
2019Trends in Ecology & Evolution48 citations
Semantic Scholar
Analysis of an improved Cyanophora paradoxa genome assembly
Dana C. Price, U. Goodenough, Robyn Roth, Jae-Hyeok Lee +11 more
2019DNA Research45 citations Open access
Semantic Scholar
Mitochondrial and Plastid Genomes from Coralline Red Algae Provide Insights into the Incongruent Evolutionary Histories of Organelles
Jun-Mo Lee, Hae Jung Song, Seung In Park, Yu-Min Lee +9 more
2018Genome Biology and Evolution43 citations Open access
Semantic Scholar
A genome-wide investigation of the effect of farming and human-mediated introduction on the ubiquitous seaweed Undaria pinnatifida
L. Graf, Y. Shin, Ji Hyun Yang, J. Choi +5 more
2021Nature Ecology & Evolution42 citations Open access
Semantic Scholar
Evidence That Inconsistent Gene Prediction Can Mislead Analysis of Dinoflagellate Genomes
Yi-Bi Chen, Raúl A. González-Pech, T. Stephens, D. Bhattacharya +1 more
2019Journal of Phycology42 citations Open access
Semantic Scholar
Evolutionary dynamics of the chromatophore genome in three photosynthetic Paulinella species
D. Lhee, Ji-San Ha, Sunju Kim, M. Park +2 more
2019Scientific Reports42 citations Open access
Semantic Scholar
Genome wide analysis of the transition to pathogenic lifestyles in Magnaporthales fungi
Ning Zhang, Guo-Hong Cai, Dana C. Price, J. Crouch +11 more
2018Scientific Reports40 citations Open access
Semantic Scholar
When Less is More: Red Algae as Models for Studying Gene Loss and Genome Evolution in Eukaryotes
D. Bhattacharya, H. Qiu, Jun-Mo Lee, Hwan Su Yoon +2 more
201838 citations
Semantic Scholar
Genome of the world’s smallest flowering plant, Wolffia australiana, helps explain its specialized physiology and unique morphology
Halim Park, J. Park, Yejin Lee, Dong U. Woo +10 more
2021Communications Biology35 citations Open access
Semantic Scholar
Extremophilic red algae as models for understanding adaptation to hostile environments and the evolution of eukaryotic life on the early earth.
J. Van Etten, C. Cho, H. Yoon, D. Bhattacharya
2022Seminars in Cell and Developmental Biology34 citations Open access
Semantic Scholar
Paulinella, a model for understanding plastid primary endosymbiosis.
A. Gabr, A. Grossman, D. Bhattacharya
2020Journal of Phycology34 citations Open access
Semantic Scholar
Unknown to Known: Advancing Knowledge of Coral Gene Function.
Phillip A. Cleves, A. Shumaker, Jun-Mo Lee, H. Putnam +1 more
2019Trends in Genetics34 citations Open access
Semantic Scholar
Active Host Response to Algal Symbionts in the Sea Slug Elysia chlorotica
C. Chan, Pavel Vaysberg, Dana C. Price, K. Pelletreau +2 more
2018Molecular biology and evolution32 citations Open access
Semantic Scholar
Improved Cladocopium goreaui Genome Assembly Reveals Features of a Facultative Coral Symbiont and the Complex Evolutionary History of Dinoflagellate Genes
Yi-Bi Chen, Sarah Shah, K. Dougan, M. V. van Oppen +2 more
2022bioRxiv30 citations Open access
Semantic Scholar
Multi-omics analysis reveals the molecular response to heat stress in a “red tide” dinoflagellate
K. Dougan, Zhi-Luo Deng, Lars Wöhlbrand, Carsten Reuse +21 more
2022bioRxiv29 citations Open access
Semantic Scholar
Amoeba genome reveals dominant host contribution to plastid endosymbiosis
D. Lhee, Jun-Mo Lee, Khaoula Ettahi, C. Cho +9 more
2020Molecular biology and evolution29 citations Open access
Semantic Scholar
Expansion of phycobilisome linker gene families in mesophilic red algae
Jun-Mo Lee, Dongseok Kim, D. Bhattacharya, H. Yoon
2019Nature Communications28 citations Open access
Semantic Scholar
Sex in Symbiodiniaceae dinoflagellates: genomic evidence for independent loss of the canonical synaptonemal complex
Sarah Shah, Yi-Bi Chen, D. Bhattacharya, C. Chan
2020Scientific Reports25 citations Open access
Semantic Scholar
Why is primary endosymbiosis so rare?
T. Stephens, A. Gabr, Victoria Calatrava, A. Grossman +1 more
2021New Phytologist24 citations Open access
Semantic Scholar
Origin of minicircular mitochondrial genomes in red algae
Yong-Sung Lee, C. Cho, Chanyoung Noh, Ji Hyun Yang +6 more
2023Nature Communications23 citations Open access
Semantic Scholar
Multi-omic characterization of the thermal stress phenome in the stony coral Montipora capitata
Amanda Williams, J. Pathmanathan, T. Stephens, Xiao-Yang Su +4 more
2021bioRxiv22 citations Open access
Semantic Scholar
Potential causes and consequences of rapid mitochondrial genome evolution in thermoacidophilic Galdieria (Rhodophyta)
C. Cho, Seung In Park, C. Ciniglia, E. Yang +3 more
2020BMC Evolutionary Biology22 citations Open access
Semantic Scholar
Electrical impedance as an indicator of microalgal cell health
Jianye Sui, Fatima Foflonker, D. Bhattacharya, M. Javanmard
2020Scientific Reports22 citations Open access
Semantic Scholar
Formation of chimeric genes with essential functions at the origin of eukaryotes
R. Méheust, D. Bhattacharya, J. Pathmanathan, J. McInerney +2 more
2018BMC Biology21 citations Open access
Semantic Scholar
Genome-powered classification of microbial eukaryotes: focus on coral algal symbionts.
K. Dougan, Raúl A. González-Pech, T. Stephens, Sarah Shah +4 more
2022Trends in Microbiology20 citations Open access
Semantic Scholar
Impact of light intensity and quality on chromatophore and nuclear gene expression in Paulinella chromatophora, an amoeba with nascent photosynthetic organelles
Ru Zhang, E. Nowack, Dana C. Price, D. Bhattacharya +1 more
2017The Plant Journal20 citations Open access
Semantic Scholar
Invertebrate methylomes provide insight into mechanisms of environmental tolerance and reveal methodological biases
S. Trigg, Y. Venkataraman, Mackenzie R. Gavery, S. Roberts +7 more
2021bioRxiv19 citations Open access
Semantic Scholar
Group II intron and repeat-rich red algal mitochondrial genomes demonstrate the dynamic recent history of autocatalytic RNAs
Dongseok Kim, Jun-Mo Lee, C. Cho, Eun Jeung Kim +2 more
2022BMC Biology18 citations Open access
Semantic Scholar
Ploidy Variation and Its Implications for Reproduction and Population Dynamics in Two Sympatric Hawaiian Coral Species
T. Stephens, E. Strand, H. Putnam, D. Bhattacharya
2021bioRxiv18 citations Open access
Semantic Scholar
Host-pathogen biotic interactions shaped vitamin K metabolism in Archaeplastida
U. Cenci, H. Qiu, T. Pillonel, P. Cardol +7 more
2018Scientific Reports18 citations Open access
Semantic Scholar
Unexpected conservation of the RNA splicing apparatus in the highly streamlined genome of Galdieria sulphuraria
H. Qiu, Alessandro W. Rossoni, A. Weber, H. Yoon +1 more
2018BMC Evolutionary Biology18 citations Open access
Semantic Scholar

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