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R. Nandakumar · SciRah

Researcher profile · Semantic Scholar

R. Nandakumar

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R. Nandakumar — researcher profile on SciRah

h-index: 30
Works: 77
Citations: 3,202

Most-cited papers

Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950–Metabolites in Frozen Human Plasma[S]
John A. Bowden, A. Heckert, C. Ulmer, Christina M. Jones +90 more
2017Journal of Lipid Research317 citations Open access
Semantic Scholar
Multivalent small molecule pan-RAS inhibitors
Matthew E. Welsch, A. Kaplan, J. Chambers, Michael E. Stokes +16 more
2017Cell248 citations Open access
Semantic Scholar
Effects of PCSK9 Inhibition with Alirocumab on Lipoprotein Metabolism in Healthy Humans
G. Reyes-Soffer, Marianna Pavlyha, C. Ngai, T. Thomas +18 more
2016Circulation218 citations Open access
Semantic Scholar
Combined Oral 5-Azacytidine and Romidepsin are Highly Effective in Patients with PTCL: A Multicenter Phase 2 Study.
L. Falchi, Helen Ma, S. Klein, J. Lue +17 more
2020Blood178 citations
Semantic Scholar
Microbial glutaminase: biochemistry, molecular approaches and applications in the food industry
R. Nandakumar, K. Yoshimune, Mamoru Wakayama, M. Moriguchi
2003148 citations
Semantic Scholar
ORAL 5-AZACYTIDINE AND ROMIDEPSIN EXHIBIT MARKED ACTIVITY IN PATIENTS WITH PTCL: A MULTICENTER PHASE I STUDY.
O. O'Connor, L. Falchi, J. Lue, E. Marchi +21 more
2019Blood119 citations Open access
Semantic Scholar
Analyzing Endodontic Infections by Deep Coverage Pyrosequencing
L. Li, William W. L. Hsiao, R. Nandakumar, S. Barbuto +4 more
2010Journal of dentistry research119 citations Open access
Semantic Scholar
The Effect of Age on Bacterial Penetration of Radicular Dentin
Payman Kakoli, R. Nandakumar, E. Romberg, D. Arola +1 more
2009Journal of Endodontics115 citations Open access
Semantic Scholar
Gut microbiota, endotoxemia, inflammation, and oxidative stress in patients with heart failure, left ventricular assist device, and transplant
M. Yuzefpolskaya, B. Bohn, M. Nasiri, A. Zuver +21 more
2020The Journal of Heart and Lung Transplantation102 citations Open access
Semantic Scholar
Alterations in Energy/Redox Metabolism Induced by Mitochondrial and Environmental Toxins: A Specific Role for Glucose-6-Phosphate-Dehydrogenase and the Pentose Phosphate Pathway in Paraquat Toxicity
Shulei Lei, L. Zavala-Flores, Aracely García-García, R. Nandakumar +6 more
2014ACS Chemical Biology98 citations Open access
Semantic Scholar
Antibiotic resistance in primary and persistent endodontic infections
Gretchen B. Jungermann, Krystal Burns, R. Nandakumar, Mostafa Tolba +2 more
2011Journal of Endodontics96 citations Open access
Semantic Scholar
Targeted insertion of cysteine by decoding UGA codons with mammalian selenocysteine machinery
Xue-Ming Xu, A. A. Turanov, B. Carlson, M. Yoo +6 more
2010Proceedings of the National Academy of Sciences of the United States of America96 citations Open access
Semantic Scholar
Proteome analysis of membrane and cell wall associated proteins from Staphylococcus aureus.
R. Nandakumar, M. Nandakumar, Mark R. Marten, J. M. Ross
2005Journal of Proteome Research95 citations
Semantic Scholar
Proteomic analysis of 17β-estradiol degradation by Stenotrophomonas maltophilia.
Zhongtian Li, R. Nandakumar, N. Madayiputhiya, Xu Li
2012Environmental Science and Technology83 citations
Semantic Scholar
Microbial survival of space vacuum and extreme ultraviolet irradiation: strain isolation and analysis during a rocket flight.
R. Saffary, R. Nandakumar, D. Spencer, F. Robb +5 more
2002FEMS Microbiology Letters80 citations
Semantic Scholar
Effects of APOC3 Heterozygous Deficiency on Plasma Lipid and Lipoprotein Metabolism
G. Reyes-Soffer, C. Sztalryd, R. Horenstein, Steve Holleran +8 more
2019Arteriosclerosis, Thrombosis and Vascular Biology78 citations Open access
Semantic Scholar
Precision Targeting with EZH2 and HDAC Inhibitors in Epigenetically Dysregulated Lymphomas
J. Lue, Sathyen A. Prabhu, Yuxuan Liu, Yulissa Gonzalez +12 more
2019Clinical Cancer Research74 citations Open access
Semantic Scholar
Plant defence suppression is mediated by a fungal sirtuin during rice infection by Magnaporthe oryzae
Jessie Fernandez, M. Marroquin-Guzman, R. Nandakumar, S. Shijo +3 more
2014Molecular Microbiology64 citations
Semantic Scholar
RpiR Homologues May Link Staphylococcus aureus RNAIII Synthesis and Pentose Phosphate Pathway Regulation
Ye-Fei Zhu, R. Nandakumar, M. Sadykov, N. Madayiputhiya +4 more
2011Journal of Bacteriology56 citations Open access
Semantic Scholar
Molecular- and culture-based comparison of the effects of antimicrobial agents on bacterial survival in infected dentinal tubules.
J. Cook, R. Nandakumar, A. Fouad
2007Journal of Endodontics56 citations
Semantic Scholar
Pharmacokinetics of levonorgestrel and ulipristal acetate emergency contraception in women with normal and obese body mass index.
Piyapa Praditpan, Angie Hamouie, Cale N. Basaraba, R. Nandakumar +3 more
2017Contraception54 citations
Semantic Scholar
Effects of mipomersen, an apolipoprotein B100 antisense, on lipoprotein (a) metabolism in healthy subjects[S]
R. Nandakumar, A. Matveyenko, T. Thomas, Marianna Pavlyha +7 more
2018Journal of Lipid Research52 citations Open access
Semantic Scholar
Quantitative proteomic profiling of the Escherichia coli response to metallic copper surfaces
R. Nandakumar, Christophe Espírito Santo, N. Madayiputhiya, G. Grass
2011Biometals48 citations
Semantic Scholar
Aurora A Kinase Inhibition Selectively Synergizes with Histone Deacetylase Inhibitor through Cytokinesis Failure in T-cell Lymphoma
Kelly M. Zullo, Yi-Ge Guo, L. Cooke, Xavier Jirau-Serrano +9 more
2015Clinical Cancer Research44 citations Open access
Semantic Scholar
Proteomic analysis of endodontic infections by liquid chromatography–tandem mass spectrometry
R. Nandakumar, N. Madayiputhiya, A. Fouad
2009Oral Microbiology and Immunology40 citations Open access
Semantic Scholar
Lysosomal phospholipase A2 contributes to the biosynthesis of the atypical late endosome lipid bis(monoacylglycero)phosphate
Jacinda Chen, A. Cazenave-Gassiot, Yimeng Xu, Paola Piroli +7 more
2023Communications Biology35 citations Open access
Semantic Scholar
Proteomic Adaptations to Starvation Prepare Escherichia coli for Disinfection Tolerance
Z. Du, R. Nandakumar, K. Nickerson, Xu Li
2014Water Research35 citations Open access
Semantic Scholar
Characterization of Plasmid pRT1 from Pyrococcus sp. Strain JT1
D. Ward, I. Revet, R. Nandakumar, J. H. Tuttle +3 more
2002Journal of Bacteriology35 citations Open access
Semantic Scholar
Plasma Trimethylamine-N-oxide and impaired glucose regulation: Results from The Oral Infections, Glucose Intolerance and Insulin Resistance Study (ORIGINS)
Sumith Roy, M. Yuzefpolskaya, R. Nandakumar, P. Colombo +1 more
2020PLoS ONE34 citations Open access
Semantic Scholar
Aspiration of Conjugated Bile Acids Predicts Adverse Lung Transplant Outcomes and Correlates with Airway Lipid and Cytokine Dysregulation
A. Urso, M. Leiva-Juárez, D. Briganti, Beatrice Aramini +11 more
2021The Journal of Heart and Lung Transplantation31 citations Open access
Semantic Scholar
Gut microbial diversity, inflammation, and oxidative stress are associated with tacrolimus dosing requirements early after heart transplantation
D. Jennings, B. Bohn, A. Zuver, Duygu Onat +17 more
2020PLoS ONE27 citations Open access
Semantic Scholar
Mechanisms of Acquired Drug Resistance to the HDAC6 Selective Inhibitor Ricolinostat Reveals Rational Drug : Drug Combination with Ibrutinib
J. Amengual, Sathyen A. Prabhu, Maximilian Lombardo, Kelly M. Zullo +11 more
2016Clinical Cancer Research27 citations Open access
Semantic Scholar
A Multienzyme Complex Channels Substrates and Electrons through Acetyl-CoA and Methane Biosynthesis Pathways in Methanosarcina
D. Lieber, Jennifer L Catlett, Nandu Madayiputhiya, R. Nandakumar +3 more
2014PLoS ONE26 citations Open access
Semantic Scholar
Overexpression of salt-tolerant glutaminase from Micrococcus luteus K-3 in Escherichia coli and its purification.
R. Nandakumar, Mamoru Wakayama, Yoshio Nagano, Tatsuro Kawamura +2 more
1999Protein Expression and Purification25 citations
Semantic Scholar
Relationship of apolipoprotein(a) isoform size with clearance and production of lipoprotein(a) in a diverse cohort
A. Matveyenko, Nelsa Matienzo, H. Ginsberg, R. Nandakumar +5 more
2023Journal of Lipid Research23 citations Open access
Semantic Scholar
Levels of Trimethylamine N-oxide Remain Elevated Long-Term After LVAD and Heart Transplantation and are Independent from Measures of Inflammation and Gut Dysbiosis.
M. Yuzefpolskaya, B. Bohn, A. Javaid, G. Mondellini +14 more
2021Circulation: Heart Failure21 citations Open access
Semantic Scholar
The Unique Role of 11-Oxygenated C19 Steroids in Both Premature Adrenarche and Premature Pubarche
Brittany K. Wise-Oringer, A. Burghard, P. O'Day, A. Hassoun +8 more
2021Hormone Research in Paediatrics17 citations Open access
Semantic Scholar
Estimating Systemic Exposure to Levonorgestrel from an Oral Contraceptive
Cale N. Basaraba, C. Westhoff, M. Pike, R. Nandakumar +1 more
2016Contraception17 citations Open access
Semantic Scholar
Alterations in Sarcopenia Index are Associated with Inflammation, Gut and Oral Microbiota among Heart Failure, Left Ventricular Assist Device and Heart Transplant Patients.
M. Yuzefpolskaya, B. Bohn, Annamaria Ladanyi, A. Pinsino +11 more
2023medRxiv15 citations Open access
Semantic Scholar
Quantitative profiling of bacteriocins present in dairy-free probiotic preparations of Lactobacillus acidophilus by nanoliquid chromatography-tandem mass spectrometry.
R. Nandakumar, K. Talapatra
2014Journal of Dairy Science15 citations Open access
Semantic Scholar
Histone biotinylation in Candida albicans.
S. Hasim, S. Tati, N. Madayiputhiya, R. Nandakumar +1 more
2013FEMS Yeast Research15 citations Open access
Semantic Scholar
Sphingolipid and Phospholipid Levels Are Altered in Human Brain in Chorea‐Acanthocytosis
G. Miltenberger-Miltenyi, A. Jones, Amber M. Tetlow, Vasco A. Conceição +12 more
2023Movement Disorders14 citations Open access
Semantic Scholar
Quantitative proteomic analysis of the Salmonella-lettuce interaction
Yu-Ping Zhang, R. Nandakumar, S. Bartelt-Hunt, D. Snow +2 more
2014Microbial Biotechnology14 citations Open access
Semantic Scholar
Identification of selected respiratory pathogens in endodontic infections
R. Nandakumar, Justin R. Whiting, A. Fouad
2008Oral surgery, oral medicine, oral pathology, oral radiology, and endodontics14 citations Open access
Semantic Scholar
Juvenile CLN3 disease is a lysosomal cholesterol storage disorder: similarities with Niemann-Pick type C disease
Jacinda Chen, R. Soni, Yimeng Xu, Sabrina Simoes +9 more
2023EBioMedicine11 citations Open access
Semantic Scholar
Arsenic exposure associated T cell proliferation, smoking, and vitamin D in Bangladeshi men and women
S. Burchiel, F. Lauer, P. Factor-Litvak, Xin-Hua Liu +12 more
2020PLoS ONE11 citations Open access
Semantic Scholar
Primer sensitivity: can it influence the results in Enterococcus faecalis prevalence studies?
R. Nandakumar, Raksha Mirchandani, A. Fouad
2007Oral surgery, oral medicine, oral pathology, oral radiology, and endodontics11 citations
Semantic Scholar
Morphology and Proteome Characterization of the Salivary Glands of the Western Chinch Bug (Hemiptera: Blissidae)
C. Ramm, A. Wayadande, L. Baird, R. Nandakumar +6 more
2015Journal of Economic Entomology10 citations
Semantic Scholar
Inflammation and Mortality in COVID-19 Hospitalized Patients With and Without Type 2 Diabetes
Jia Guo, Wen-Hsuan W. Lin, Jason E. Zucker, R. Nandakumar +3 more
2022Journal of Clinical Endocrinology and Metabolism9 citations Open access
Semantic Scholar
A UPLC-MS/MS method for the quantitation of Ulipristal acetate in human serum.
R. Nandakumar, Piyapa Praditpan, C. Westhoff, S. Cremers
2017Journal of chromatography. B, Analytical technologies in the biomedical and life sciences8 citations
Semantic Scholar

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