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Shu-Hui Song · SciRah

Researcher profile · Semantic Scholar

Shu-Hui Song

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Shu-Hui Song — researcher profile on SciRah

h-index: 35
Works: 73
Citations: 3,691

Most-cited papers

RNA m6A methylation participates in regulation of postnatal development of the mouse cerebellum
Chun-Hui Ma, Mengqi Chang, Hongyi Lv, Zhi-Wei Zhang +13 more
2018Genome Biology233 citations Open access
Semantic Scholar
Database Resources of the National Genomics Data Center in 2020
Zhang Zhang, Wen-Ming Zhao, Jing-Fa Xiao, Yiming Bao +158 more
2019Nucleic Acids Res.215 citations Open access
Semantic Scholar
GWAS Atlas: a curated resource of genome-wide variant-trait associations in plants and animals
Dong-Mei Tian, Pei Wang, Bixia Tang, Xu-Fei Teng +5 more
2019Nucleic Acids Res.179 citations Open access
Semantic Scholar
How many human genes can be defined as housekeeping with current expression data?
Jiang Zhu, F. He, Shu-Hui Song, Jing Wang +1 more
2008BMC Genomics154 citations Open access
Semantic Scholar
Region-specific RNA m6A methylation represents a new layer of control in the gene regulatory network in the mouse brain
Mengqi Chang, Hongyi Lv, Weilong Zhang, Chun-Hui Ma +7 more
2017Open Biology148 citations Open access
Semantic Scholar
Integrated analysis of phenome, genome, and transcriptome of hybrid rice uncovered multiple heterosis-related loci for yield increase
Da-Yong Li, Zhi-Yuan Huang, Shu-Hui Song, Ye-Yun Xin +21 more
2016Proceedings of the National Academy of Sciences of the United States of America147 citations Open access
Semantic Scholar
Transcriptome-wide N6-methyladenosine profiling of rice callus and leaf reveals the presence of tissue-specific competitors involved in selective mRNA modification
Yu-Li Li, Xiliang Wang, Cui-Ping Li, Songnian Hu +2 more
2014RNA Biology141 citations Open access
Semantic Scholar
Comparative metabolomic analysis reveals a reactive oxygen species-dominated dynamic model underlying chilling environment adaptation and tolerance in rice.
Jingyu Zhang, W. Luo, Yuan Zhao, Yun-Yuan Xu +2 more
2016New Phytologist139 citations Open access
Semantic Scholar
Mapping regulatory variants controlling gene expression in drought response and tolerance in maize
Sheng-Xue Liu, Cui-Ping Li, Hong-Wei Wang, Shu-Hui Wang +8 more
2020Genome Biology133 citations Open access
Semantic Scholar
Database Resources of the BIG Data Center in 2019
Zhang Zhang, Wen-Ming Zhao, Jing-Fa Xiao, Yiming Bao +90 more
2018Nucleic Acids Research131 citations Open access
Semantic Scholar
Database Resources of the BIG Data Center in 2018
Xingjian Xu, L. Hao, Jun-Wei Zhu, Qing Zhou +73 more
2017Nucleic Acids Res.122 citations Open access
Semantic Scholar
The Global Landscape of SARS-CoV-2 Genomes, Variants, and Haplotypes in 2019nCoVR
Shu-Hui Song, Lina Ma, Dong Zou, Dong-Mei Tian +26 more
2020bioRxiv114 citations Open access
Semantic Scholar
Genome Variation Map: a worldwide collection of genome variations across multiple species
Cui-Ping Li, Dong-Mei Tian, Bixia Tang, Xiaonan Liu +4 more
2020Nucleic Acids Res.96 citations Open access
Semantic Scholar
Integrated analysis of miRNA and mRNA expression profiles in response to Cd exposure in rice seedlings
Mingfeng Tang, Donghai Mao, Li-Wei Xu, Da-Yong Li +2 more
2014BMC Genomics87 citations Open access
Semantic Scholar
Maternal factors required for oocyte developmental competence in mice: Transcriptome analysis of non-surrounded nucleolus (NSN) and surrounded nucleolus (SN) oocytes
Jun-Yu Ma, Mo Li, Yi-Bo Luo, Shu-Hui Song +7 more
2013Cell Cycle87 citations Open access
Semantic Scholar
Mechanism Analysis of Acid Tolerance Response of Bifidobacterium longum subsp. longum BBMN 68 by Gene Expression Profile Using RNA-Sequencing
Jun-Hua Jin, Bing Zhang, Hui-Yuan Guo, Jian-Yun Cui +4 more
2012PLoS ONE87 citations Open access
Semantic Scholar
Integrated Transcriptomic and Proteomic Analysis of the Bile Stress Response in a Centenarian-originated Probiotic Bifidobacterium longum BBMN68*
Haoran An, François P. Douillard, Guo-Hong Wang, Zheng-Yuan Zhai +7 more
2014Molecular & Cellular Proteomics74 citations Open access
Semantic Scholar
METTL3 regulates m6A methylation of PTCH1 and GLI2 in Sonic hedgehog signaling to promote tumor progression in SHH-medulloblastoma.
Zhi-Wei Zhang, Xu-Fei Teng, Fu Zhao, Chunhui Ma +11 more
2022Cell Reports73 citations Open access
Semantic Scholar
An online coronavirus analysis platform from the National Genomics Data Center
Zheng Gong, Junfei Zhu, Cui-Ping Li, Shuai Jiang +12 more
2020Zoological Research69 citations Open access
Semantic Scholar
Rice Genomics: over the Past Two Decades and into the Future
Shu-Hui Song, Dong-Mei Tian, Zhang Zhang, Songnian Hu +1 more
2018Genomics, Proteomics & Bioinformatics63 citations Open access
Semantic Scholar
Discovery of immune-related genes in Chinese mitten crab (Eriocheir sinensis) by expressed sequence tag analysis of haemocytes.
Da-Xian Zhao, Shu-Hui Song, Qun Wang, Xiaowei Zhang +2 more
200959 citations
Semantic Scholar
Whole Genome Analyses of Chinese Population and De Novo Assembly of A Northern Han Genome
Zhenglin Du, Liang Ma, H. Qu, Wei Chen +26 more
2019Genomics, Proteomics & Bioinformatics58 citations Open access
Semantic Scholar
Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines
Xiaomeng Ge, Wei-Hua Chen, Shu-Hui Song, Weiwei Wang +2 more
2008BMC Plant Biology56 citations Open access
Semantic Scholar
Proteomic profiling of rice embryos from a hybrid rice cultivar and its parental lines
Weiwei Wang, Bo Meng, Xiaomeng Ge, Shu-Hui Song +6 more
2008Proteomics56 citations
Semantic Scholar
Bioinformatics Applications Note Databases and Ontologies Waprna: a Web-based Application for the Processing of Rna Sequences
Wen-Ming Zhao, Wanfei Liu, Dong-Mei Tian, Bixia Tang +7 more
56 citations
Semantic Scholar
Genome Variation Map: a data repository of genome variations in BIG Data Center
Shu-Hui Song, Dong-Mei Tian, Cui-Ping Li, Bixia Tang +6 more
2017Nucleic Acids Res.54 citations Open access
Semantic Scholar
Aneuploid embryonic stem cells exhibit impaired differentiation and increased neoplastic potential
Meili Zhang, Li Cheng, Yuyan Jia, Guang Liu +4 more
2016EMBO Journal54 citations Open access
Semantic Scholar
Characterization and comparative profiling of ovarian microRNAs during ovine anestrus and the breeding season
R. Di, Jian-Ning He, Shu-Hui Song, Dongmei Tian +11 more
2014BMC Genomics50 citations Open access
Semantic Scholar
Population Genetics of SARS-CoV-2: Disentangling Effects of Sampling Bias and Infection Clusters
Qi Liu, Shilei Zhao, Cheng-Min Shi, Shu-Hui Song +7 more
2020Genomics, Proteomics & Bioinformatics45 citations Open access
Semantic Scholar
GWAS Atlas: an updated knowledgebase integrating more curated associations in plants and animals
Xiaonan Liu, Dongmei Tian, Cui-Ping Li, Bixia Tang +7 more
2022Nucleic Acids Res.41 citations Open access
Semantic Scholar
Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE data
Shu-Hui Song, H. Qu, Cheng Chen, Songnian Hu +1 more
2007BMC Plant Biology41 citations Open access
Semantic Scholar
Complete Genome Sequence of Bifidobacterium longum subsp. longum BBMN68, a New Strain from a Healthy Chinese Centenarian
Yan-Ling Hao, Dawei Huang, Hui Guo, Man Xiao +8 more
2010Journal of Bacteriology40 citations Open access
Semantic Scholar
Transcriptome Analysis Reveals Putative Genes Involved in Iridoid Biosynthesis in Rehmannia glutinosa
P. Sun, Shu-Hui Song, Li-li Zhou, Bing Zhang +2 more
2012International Journal of Molecular Sciences39 citations Open access
Semantic Scholar
Discovery, Identification and Comparative Analysis of Non-Specific Lipid Transfer Protein (nsLtp) Family in Solanaceae
Wanfei Liu, Dawei Huang, Kan Liu, Songnian Hu +3 more
2010Genomics, Proteomics & Bioinformatics36 citations Open access
Semantic Scholar
Computational identification and characterization of glioma candidate biomarkers through multi-omics integrative profiling
Lin Liu, Guangyu Wang, Li-Guo Wang, Chunlei Yu +5 more
2020Biology Direct35 citations Open access
Semantic Scholar
Transciptome Analysis of the Gill and Swimbladder of Takifugu rubripes by RNA-Seq
Jun Cui, Shi-Kai Liu, Bing Zhang, Hong-Di Wang +7 more
2014PLoS ONE35 citations Open access
Semantic Scholar
SoyOmics: A deeply integrated database on soybean multi-omics
Yu-Cheng Liu, Yang Zhang, Xiaonan Liu, Yanting Shen +7 more
2023bioRxiv32 citations Open access
Semantic Scholar
Complete Genome Sequence of the Pathogenic Bacterium Riemerella anatipestifer Strain RA-GD
Jian-Feng Yuan, Wanfei Liu, Mingfei Sun, Shu-Hui Song +2 more
2011Journal of Bacteriology32 citations Open access
Semantic Scholar
Comparative Analyses of H3K4 and H3K27 Trimethylations Between the Mouse Cerebrum and Testis
P. Cui, Wanfei Liu, Yu-Hui Zhao, Q. Lin +8 more
2012Genomics, Proteomics & Bioinformatics31 citations Open access
Semantic Scholar
SR4R: An Integrative SNP Resource for Genomic Breeding and Population Research in Rice
Jun Yan, Dong Zou, Chen Li, Zhang Zhang +2 more
2020Genomics, Proteomics & Bioinformatics24 citations Open access
Semantic Scholar
RNA-Seq Based De Novo Transcriptome Assembly and Gene Discovery of Cistanche deserticola Fleshy Stem
Yu-Li Li, Xiliang Wang, Tingting Chen, Fuwen Yao +7 more
2015PLoS ONE24 citations Open access
Semantic Scholar
Transcriptomic analyses of neurotoxic effects in mouse brain after intermittent neonatal administration of thimerosal.
Xiaoling Li, Fengqin Qu, Wenjuan Xie, Fengli Wang +8 more
2014Toxicological Sciences22 citations Open access
Semantic Scholar
Whole Transcriptome Analysis of the Effects of Type I Diabetes on Mouse Oocytes
Jun-Yu Ma, Mo Li, Zhao-Jia Ge, Yi-Bo Luo +10 more
2012PLoS ONE22 citations Open access
Semantic Scholar
Differential Expression of Hepatic Genes of the Greater Horseshoe Bat (Rhinolophus ferrumequinum) between the Summer Active and Winter Torpid States
Yanhong Xiao, Yonghua Wu, Ke-Ping Sun, Hui Wang +11 more
2015PLoS ONE20 citations Open access
Semantic Scholar
Transcriptional profiling of biomass degradation-related genes during Trichoderma reesei growth on different carbon sources.
Xiu-Zhen Chen, Yingfeng Luo, Hong-Ting Yu, Yu-Hui Sun +4 more
2014Journal of Biotechnology20 citations
Semantic Scholar
Towards comprehensive integration and curation of chloroplast genomes
Zhong-Yi Hua, Dongmei Tian, Chao Jiang, Shu-Hui Song +6 more
2022Plant Biotechnology Journal18 citations Open access
Semantic Scholar
HGD: an integrated homologous gene database across multiple species
Guangya Duan, Gangao Wu, Xiao-Ning Chen, Dongmei Tian +11 more
2022Nucleic Acids Res.17 citations Open access
Semantic Scholar
On the origin of SARS-CoV-2—The blind watchmaker argument
Chung-I Wu, Hai-jun Wen, Jian Lu, Xiao-Dong Su +18 more
2021Science China Life Sciences17 citations Open access
Semantic Scholar
MeRIP-PF: An Easy-to-use Pipeline for High-resolution Peak-finding in MeRIP-Seq Data
Yu-Li Li, Shu-Hui Song, Cui-Ping Li, Jun Yu
2013Genomics, Proteomics & Bioinformatics17 citations Open access
Semantic Scholar
RNA m6A Methylation Regulators Subclassify Luminal Subtype in Breast Cancer
Lin Yang, Shuang-Ling Wu, Chun-Hui Ma, Shu-Hui Song +3 more
2021Frontiers in Oncology16 citations Open access
Semantic Scholar

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