Zhang Zhang

Most-cited papers

1. A general deep learning framework for network reconstruction and dynamics learning

   Zhang Zhang, Yi Zhao, Jing Liu, Shuo Wang +3 more

   2018Applied Network Science72 citations Open access

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2. An interpretable deep-learning architecture of capsule networks for identifying cell-type gene expression programs from single-cell RNA-sequencing data

   Li-Fei Wang, Rui Nie, Zeyang Yu, Ru-Yue Xin +4 more

   2020Nature Machine Intelligence50 citations Open access

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3. Universal framework for reconstructing complex networks and node dynamics from discrete or continuous dynamics data.

   Y. Zhang, Yu Guo, Zhang Zhang, Mengyuan Chen +2 more

   2022Physical Review E27 citations Open access

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4. Coarse-graining network flow through statistical physics and machine learning

   Zhang Zhang, Arsham Ghavasieh, Jiang Zhang, M. De Domenico

   2025Nature Communications17 citations Open access

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5. Inferring Network Structure with Unobservable Nodes from Time Series Data

   Mengyuan Chen, Yan Zhang, Zhang Zhang, Lun Du +2 more

   2022Chaos16 citations Open access

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6. Neural Network Pruning by Gradient Descent

   Zhang Zhang, Ru-Yi Tao, Jiang Zhang

   2023arXiv.org11 citations

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7. Inference for Network Structure and Dynamics from Time Series Data via Graph Neural Network

   Mengyuan Chen, Jiang Zhang, Zhang Zhang, Lun Du +3 more

   2020arXiv.org8 citations

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8. Automated Discovery of Interactions and Dynamics for Large Networked Dynamical Systems

   Y. Zhang, Yu Guo, Zhang Zhang, Mengyuan Chen +3 more

   20217 citations

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9. The structure inference of flocking systems based on the trajectories.

   Jingjie Liang, Ming-Ze Qi, Kongjing Gu, Yuan Liang +2 more

   2022Chaos5 citations

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10. Neural Gene Network Constructor: A Neural Based Model for Reconstructing Gene Regulatory Network

    Zhang Zhang, Lifei Wang, Shuo Wang, Ru-Yi Tao +4 more

    2019bioRxiv4 citations Open access

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11. A deep generative framework with embedded vector arithmetic and classifier for sample generation, label transfer, and clustering of single-cell data

    Lifei Wang, Rui Nie, Zhang Zhang, Wei-Wei Gu +4 more

    2023Cell Reports Methods3 citations Open access

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12. Corrigendum: MultiCapsNet: A General Framework for Data Integration and Interpretable Classification

    Lifei Wang, Xuexia Miao, Rui Nie, Zhang Zhang +2 more

    2022Frontiers in Genetics2 citations Open access

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13. Graph Auto-Encoders for Network Completion

    Zhang Zhang, Ru-Yi Tao, Yongzai Tao, Jiang Zhang

    2022arXiv.org2 citations Open access

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14. MultiCapsNet: A General Framework for Data Integration and Interpretable Classification

    Lifei Wang, Xuexia Miao, Rui Nie, Zhang Zhang +2 more

    2021Frontiers in Genetics2 citations Open access

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15. inClust: a general framework for clustering that integrates data from multiple sources

    Lifei Wang, Rui Nie, Zhang Zhang, Weiwei Gu +4 more

    2022bioRxiv1 citations Open access

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16. Graph Completion Through Local Pattern Generalization

    Zhang Zhang, Ru-Yi Tao, Yongzai Tao, Ming Qi +1 more

    2023International Workshop on Complex Networks & Their Applications0 citations

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17. Completing Networks by Learning Local Connection Patterns

    Zhang Zhang, Ru-Yi Tao, Yongzai Tao, Ming-Ze Qi +1 more

    20220 citations

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18. A Universal Framework for Reconstructing Complex Networks and Node Dynamics from Discrete or Continuous Dynamics Data

    Yan Zhang, Yu Guo, Zhang Zhang, Mengyuan Chen +2 more

    20210 citations

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19. A General Deep Learning Framework for Structure and Dynamics Reconstruction from Time Series Data

    Zhang Zhang, Jing Liu, Shuo Wang, Ru-Yue Xin +1 more

    2018arXiv.org0 citations

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