Jie-Ying Yang

Most-cited papers

1. Single-cell dissection of the obesity-exercise axis in adipose-muscle tissues implies a critical role for mesenchymal stem cells

   Jie-Ying Yang, Maria Vamvini, P. Nigro, L. Ho +13 more

   2022Cell Metabolism85 citations Open access

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2. Exercise training remodels inguinal white adipose tissue through adaptations in innervation, vascularization, and the extracellular matrix

   P. Nigro, Maria Vamvini, Jie-Ying Yang, T. Caputo +14 more

   2022bioRxiv47 citations Open access

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3. Dissecting the tumor microenvironment in response to immune checkpoint inhibitors via single-cell and spatial transcriptomics

   Wen-Di Liu, Anusha Puri, Doris Fu, Lee Chen +3 more

   2023Clinical and Experimental Metastasis42 citations Open access

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4. SIRT1 knock-in mice preserve ovarian reserve resembling caloric restriction.

   Guanbao Long, Jie-Ying Yang, J. Xu, Yan-Hong Ni +4 more

   2019Gene37 citations

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5. Antigen presenting cells in cancer immunity and mediation of immune checkpoint blockade

   Cassia Wang, Lee Chen, Doris Fu, Wen-Di Liu +3 more

   2024Clinical and Experimental Metastasis32 citations Open access

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6. Mature and migratory dendritic cells promote immune infiltration and response to anti-PD-1 checkpoint blockade in metastatic melanoma

   Jie-Ying Yang, Cassia Wang, Doris Fu, Li-Lun Ho +20 more

   2025Nature Communications17 citations Open access

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7. Overcoming resistance to immunotherapy by targeting CD38 in human tumor explants

   Or-Yam Revach, Angelina M Cicerchia, Ofir Shorer, Claire A. Palin +48 more

   2025Cell Reports Medicine17 citations Open access

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8. Mature and migratory dendritic cells promote immune infiltration and response to anti-PD-1 checkpoint blockade in metastatic melanoma

   Jie-Ying Yang, Cassia Wang, Doris Fu, Li-Lun Ho +15 more

   2024bioRxiv12 citations Open access

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9. Learning to estimate sample-specific transcriptional networks for 7,000 tumors

   Caleb N. Ellington, Benjamin J. Lengerich, T. Watkins, Jie-Ying Yang +5 more

   2025bioRxiv5 citations Open access

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10. Impaired nitrogenous waste clearance promotes hepatocellular carcinoma

    Xinlu Han, Jianliang Shen, Junrong Yan, Rahul Tacke +18 more

    2026Science Advances4 citations

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11. Disrupting CD38-driven T cell dysfunction restores sensitivity to cancer immunotherapy

    Or-Yam Revach, Angelina M Cicerchia, Ofir Shorer, Boryana Petrova +46 more

    2024bioRxiv4 citations Open access

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12. Specific oncogene activation of the cell of origin in mucosal melanoma

    Swathy Babu, Jia-Jia Chen, Emily J Robitschek, Chloé S. Baron +18 more

    2024bioRxiv4 citations Open access

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13. Single-cell dissection of obesity-exercise axis in adipose-muscle tissues

    Jie-Ying Yang, Maria Vamvini, P. Nigro, L. Ho +10 more

    2021bioRxiv4 citations Open access

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14. Specific oncogene activation of the cell of origin in mucosal melanoma

    Swathy Babu, Jia-Jia Chen, Chloé S. Baron, Kaiwen Sun +19 more

    2025Nature Communications3 citations Open access

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15. Abstract 3271: Multiomic meta-analysis of differential response to PD-1 and CTLA-4 blockade in metastatic melanoma

    Amy Y. Huang, N. Vokes, Cora A. Ricker, Tyler J. Aprati +12 more

    2023Cancer Research3 citations

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16. Stratified analysis identifies HIF-2α as a therapeutic target for highly immune-infiltrated melanomas

    Amy Y. Huang, Kelly P. Burke, R. Porter, Lynn Meiger +22 more

    2024bioRxiv2 citations Open access

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17. Enhancer Reprogramming in Melanoma Immune Checkpoint Therapy Resistance

    M. Maitituoheti, Alvin Shi, M. Tang, L. Ho +31 more

    2022bioRxiv2 citations Open access

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18. Type 2 Diabetes and Obesity Alter Exercise Training-Induced Transcriptional Adaptations to Subcutaneous White Adipose Tissue

    R. Middelbeek, Jie-Ying Yang, P. Nigro, Benjamin T. James +10 more

    2025bioRxiv1 citations Open access

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19. Author Correction: Specific oncogene activation of the cell of origin in mucosal melanoma

    Swathy Babu, Jia-Jia Chen, Chloé S. Baron, Kaiwen Sun +19 more

    2026Nature Communications0 citations Open access

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20. Optimized Ex Vivo Differentiation of CD103+ Dendritic Cells and High-Efficiency Retroviral Transduction of Mouse Bone Marrow HSCs

    Mukta Asnani, Jie-Ying Yang

    2025bioRxiv0 citations Open access

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21. Abstract 6425: Functional roles of enhancers in immune microenvironment & immunotherapy response

    Kunal Rai, M. Maitituoheti, Alvin Shi, M. Tang +33 more

    2023Cancer Research0 citations

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22. Abstract 6430: Single-cell transcriptomic and epigenomic landscapes of innate and adaptive immune cells in metastatic melanoma treated with immunotherapy

    Jie-Ying Yang, Doris Fu, K. Galani, L. Ho +12 more

    2023Cancer Research0 citations

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23. Mature and migratory dendritic cells promote immune infiltration and response to anti-PD-1 checkpoint blockade in metastatic melanoma

    Jie-Ying Yang

    0 citations

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