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S. Nagamatsu · SciRah

Researcher profile · Semantic Scholar

S. Nagamatsu

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S. Nagamatsu — researcher profile on SciRah

h-index: 12
Works: 49
Citations: 412

Most-cited papers

Unraveling the genetic basis of xylose consumption in engineered Saccharomyces cerevisiae strains
L. D. dos Santos, M. Carazzolle, S. Nagamatsu, Nadia M. V. Sampaio +6 more
2016Scientific Reports74 citations Open access
Semantic Scholar
Fungal L-asparaginase: Strategies for production and food applications.
M. D. da Cunha, Jessika Gonçalves dos Santos Aguilar, R. D. de Melo, S. Nagamatsu +3 more
2019Food Research International59 citations Open access
Semantic Scholar
Global analysis of erythroid cells redox status reveals the involvement of Prdx1 and Prdx2 in the severity of beta thalassemia
K. S. Romanello, K. K. L. Teixeira, João P M O Silva, S. Nagamatsu +13 more
2018PLoS ONE27 citations Open access
Semantic Scholar
Profiling neuronal methylome and hydroxymethylome of opioid use disorder in the human orbitofrontal cortex
G. Rompala, S. Nagamatsu, J. Martínez-Magaña, Diana L. Núñez-Ríos +6 more
2022medRxiv26 citations Open access
Semantic Scholar
Psychiatric Genetics in the Diverse Landscape of Latin American Populations
E. Bruxel, D. Rovaris, S. Belangero, Gabriela Chavarría-Soley +78 more
2025Nature Genetics24 citations Open access
Semantic Scholar
Central and Peripheral Immune Dysregulation in Posttraumatic Stress Disorder: Convergent Multi-Omics Evidence
Diana L. Núñez-Ríos, J. Martínez-Magaña, S. Nagamatsu, Diego E Andrade-Brito +3 more
2022Biomedicines20 citations Open access
Semantic Scholar
Genetic variation in symbiotic islands of natural variant strains of soybean Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens differing in competitiveness and in the efficiency of nitrogen fixation
Flávia Raquel Bender, S. Nagamatsu, Jakeline Renata Marçon Delamuta, R. A. Ribeiro +2 more
2022Microbial Genomics18 citations Open access
Semantic Scholar
Bioinformatics applied to biotechnology: A review towards bioenergy research
L. M. de Carvalho, Guilherme Borelli, A. Camargo, M. A. de Assis +10 more
2019Biomass & Bioenergy18 citations
Semantic Scholar
Expected Genotype Quality and Diploidized Marker Data from Genotyping‐by‐Sequencing of Urochloa spp. Tetraploids
F. I. Matias, Karem Guimarães Xavier Meireles, S. Nagamatsu, Sanzio Carvalho Lima Barrios +4 more
2019bioRxiv16 citations Open access
Semantic Scholar
CpH methylome analysis in human cortical neurons identifies novel gene pathways and drug targets for opioid use disorder
S. Nagamatsu, G. Rompala, Y. Hurd, Diana L. Núñez-Ríos +1 more
2023Frontiers in Psychiatry14 citations Open access
Semantic Scholar
Neuronal-specific methylome and hydroxymethylome analysis reveal significant loci associated with alcohol use disorder
Diego E Andrade-Brito, Diana L. Núñez-Ríos, J. Martínez-Magaña, S. Nagamatsu +6 more
2024Frontiers in Genetics12 citations Open access
Semantic Scholar
Ethanol production process driving changes on industrial strains.
S. Nagamatsu, Natalia Coutouné, J. José, M. B. Fiamenghi +3 more
2021FEMS Yeast Research12 citations Open access
Semantic Scholar
Genome Assembly of a Highly Aldehyde-Resistant Saccharomyces cerevisiae SA1-Derived Industrial Strain
S. Nagamatsu, G. Teixeira, Fellipe da Silveira Bezerra de Mello, Pedro A. G. Tizei +4 more
2019Microbiology Resource Announcements12 citations Open access
Semantic Scholar
Psychosocial Factors Associated With Accelerated GrimAge in Male U.S. Military Veterans.
Amanda J. F. Tamman, S. Nagamatsu, J. Krystal, J. Gelernter +2 more
2022The American journal of geriatric psychiatry11 citations Open access
Semantic Scholar
Rational engineering of industrial S. cerevisiae: towards xylitol production from sugarcane straw
Fellipe da Silveira Bezerra de Mello, Carla Maneira, Frank Uriel Lizarazo Suarez, S. Nagamatsu +8 more
2022Journal of Genetic Engineering and Biotechnology10 citations Open access
Semantic Scholar
Identification of bovine CpG SNPs as potential targets for epigenetic regulation via DNA methylation
M. B. C. Maldonado, Nelson B. de Rezende, S. Nagamatsu, M. Carazzolle +7 more
2019PLoS ONE10 citations Open access
Semantic Scholar
New contributions for industrial n-butanol fermentation: An optimized Clostridium strain and the use of xylooligosaccharides as a fermentation additive
M. Grassi, M. Carazzolle, B. T. Nakagawa, A. Ferrari +5 more
2018Biomass & Bioenergy9 citations
Semantic Scholar
Cross-Species Convergence of Brain Transcriptomic and Epigenomic Findings in Posttraumatic Stress Disorder: A Systematic Review
Diana L. Núñez-Ríos, J. Martínez-Magaña, S. Nagamatsu, J. Krystal +3 more
2023Complex Psychiatry6 citations Open access
Semantic Scholar
Association of Symptoms of Posttraumatic Stress Disorder and GrimAge, an Epigenetic Marker of Mortality Risk, in US Military Veterans
P. Na, J. Montalvo-Ortiz, S. Nagamatsu, S. Southwick +3 more
2022Journal of Clinical Psychiatry6 citations Open access
Semantic Scholar
Internode elongation in energy cane shows remarkable clues on lignocellulosic biomass biosynthesis in Saccharum hybrids.
Karina Yanagui, E. Camargo, L. G. F. de Abreu, S. Nagamatsu +9 more
2022Gene6 citations Open access
Semantic Scholar
Decoding the role of transcriptomic clocks in the human prefrontal cortex
J. Martínez-Magaña, J. Krystal, M. Girgenti, Diana L. Núñez-Ríos +3 more
2023medRxiv5 citations Open access
Semantic Scholar
DNA methylation changes in African American women with a history of preterm birth from the InterGEN study
Veronica Barcelona, J. Montalvo-Ortiz, M. Wright, S. Nagamatsu +4 more
2021BMC Genomic Data5 citations Open access
Semantic Scholar
Dissecting the epigenomic differences between smoking and nicotine dependence in a veteran cohort
S. Nagamatsu, R. Pietrzak, Ke Xu, J. Krystal +2 more
2021medRxiv4 citations Open access
Semantic Scholar
Posttraumatic Stress Disorder, Obesity, and Accelerated Epigenetic Aging Among US Military Veterans.
Ian C. Fischer, P. Na, S. Nagamatsu, Dilip V. Jeste +6 more
2024JAMA psychiatry2 citations Open access
Semantic Scholar
Races of Japanese radish downy mildew fungus.
T. Ohguchi, S. Nagamatsu, Y. Asada
19902 citations
Semantic Scholar
Identifying novel gene dysregulation associated with opioid overdose death: a meta-analysis of differential gene expression in human prefrontal cortex
Javan K. Carter, B. Quach, Caryn Willis, Melyssa S. Minto +54 more
2026Translational Psychiatry1 citations Open access
Semantic Scholar
Integrated Gene and Isoform-Level Transcriptomic Analysis of Adverse Childhood Experiences in the Human Prefrontal Cortex
Diana L. Núñez-Ríos, S. Nagamatsu, J. Martínez-Magaña, J. Montalvo-Ortiz
2025The Yale Journal of Biology and Medicine1 citations Open access
Semantic Scholar
Developmental timing of index trauma exposure and accelerated epigenetic aging in United States military veterans.
Amanda J. F. Tamman, S. Nagamatsu, Brenda Cabrera-Mendoza, L. Averill +6 more
2025Psychoneuroendocrinology1 citations
Semantic Scholar
Mapping the epigenomic landscape of post-traumatic stress disorder in human cortical neurons
Diana L. Núñez-Ríos, S. Nagamatsu, J. Martínez-Magaña, Y. Hurd +3 more
2024medRxiv1 citations Open access
Semantic Scholar
Know-how of holding a Bioinformatics competition: Structure, model, overview, and perspectives
E. C. A. Horácio, L. M. de Carvalho, Gustavo G. Pereira, Mayla Abrahim +5 more
2023PLoS Comput. Biol.1 citations Open access
Semantic Scholar
Rational engineering of industrial S. cerevisiae: towards xylitol production from sugarcane bagasse
Fellipe da Silveira Bezerra de Mello, Carla Maneira, Frank Uriel Suarez Lizarazo, S. Nagamatsu +8 more
2021bioRxiv1 citations Open access
Semantic Scholar
Epigenetic Aging in Individuals with Substance Use Disorders:Sex, Ancestry, and Age Group Differences
Patricia Torres Rivera, S. Nagamatsu, J. Martínez-Magaña, L. Zillich +7 more
2026Biological Psychiatry Global Open Science0 citations Open access
Semantic Scholar
Building epigenetic risk scores of opioid use disorder: Insights from human postmortem brain data
Frances Heredia-Negrón, S. Nagamatsu, Kelvin Carrasquillo-Carrión, Y. Hurd +5 more
2026Translational Psychiatry0 citations Open access
Semantic Scholar
27. EPIGENOME-WIDE ANALYSIS REVEALS DISTINCT DNA METHYLATION PROFILES FOR OPIOID DEPENDENCE VERSUS OPIOID EXPOSURE
Taliana Salcedo, Diana L. Núñez-Ríos, S. Nagamatsu, J. Martínez-Magaña +5 more
2026European Neuropsychopharmacology0 citations Open access
Semantic Scholar
A large-scale meta-analysis of DNA methylation signatures of alcohol use disorder in the Psychiatric Genomics Consortium
L. Zillich, S. D'Augello, D. Avetyan, G. E. Delgado +40 more
2026Nature Mental Health0 citations Open access
Semantic Scholar
Decoding the role of transcriptomic clocks in the human prefrontal cortex
J. Martínez-Magaña, Anna Vlot, K. Sullivan, Daniel A. Jacobson +13 more
2026iScience0 citations Open access
Semantic Scholar
M11. MULTI-OMICS ANALYSIS OF ADVERSE CHILDHOOD EXPERIENCES (ACE) IN THE ORBITOFRONTAL CORTEX (OFC) OF HUMAN POSTMORTEM BRAIN
Diana L. Núñez-Ríos, L. Jiménez, Julia G Luppino, S. Nagamatsu +3 more
2025European Neuropsychopharmacology0 citations
Semantic Scholar
The Prefrontal Cortex Transcriptomic Landscape of the Comorbidity Between Post-Traumatic Stress Disorder and Opioid Misuse
Jaime Martínez-Magaña, S. Nagamatsu, Diana L. Núñez-Ríos, J. Krystal +2 more
2024Biological Psychiatry0 citations
Semantic Scholar
Multi-Omics Mapping in Human Cortical Neurons Reveals Well-Known and Novel Loci of Post-Traumatic Stress Disorder
Diana L. Núñez-Ríos, Y. Hurd, Gregory Rompala, S. Nagamatsu +3 more
2024Biological Psychiatry0 citations
Semantic Scholar
Correction: Psychosocial moderators of polygenic risk scores of inflammatory biomarkers in relation to GrimAge
Amanda J. F. Tamman, D. Koller, S. Nagamatsu, Brenda Cabrera-Mendoza +6 more
2024Neuropsychopharmacology0 citations Open access
Semantic Scholar
Neuronal-specific methylome and hydroxymethylome analysis reveal replicated and novel loci associated with alcohol use disorder
Diego E Andrade-Brito, Diana L. Núñez-Ríos, J. Martínez-Magaña, S. Nagamatsu +6 more
2023medRxiv0 citations Open access
Semantic Scholar
CpG and Non-CpG Epigenomic Analyses in Orbitofrontal Neurons Reveal Hydroxymethylation as an Important Regulatory Mechanism in PTSD
J. Montalvo-Ortiz, Diana L. Núñez-Ríos, Y. Hurd, G. Rompala +3 more
2023Biological Psychiatry0 citations
Semantic Scholar
NON-CPG METHYLOME ANALYSIS IN HUMAN CORTICAL NEURONS IDENTIFIES NOVEL GENE PATHWAYS AND DRUG TARGETS FOR OPIOID USE DISORDER
S. Nagamatsu, G. Rompala, Y. Hurd, Diana L. Nuñez +2 more
2022European Neuropsychopharmacology0 citations
Semantic Scholar
T69. CPG AND NON-CPG EPIGENOMIC MAPPING IN HUMAN CORTICAL NEURONS REVEALS HYDROXYMETHYLATION AS AN IMPORTANT GENE REGULATORY MECHANISM IN PTSD
Diana L. Nuñez, G. Rompala, Y. Hurd, S. Nagamatsu +5 more
2022European Neuropsychopharmacology0 citations
Semantic Scholar
TP53 MUTATIONS IN THE TRANSITION OF PLEOMORPHIC ADENOMA TO CARCINOMA EX PLEOMORPHIC ADENOMA
J. Scarini, S. Nagamatsu, L. S. Mofatto, Rodrigo A. Maioral +3 more
2022Oral surgery, oral medicine, oral pathology and oral radiology0 citations
Semantic Scholar
14. PROFILING NEUROEPIGENOMIC NETWORKS OF OPIOID USE DISORDER IN HUMAN ORBITOFRONTAL CORTEX
G. Rompala, S. Nagamatsu, Y. Hurd, J. Krystal +2 more
2021European Neuropsychopharmacology0 citations
Semantic Scholar
Differential Methylation and Co-Methylation Analysis Reveals Functional Targets of Major Depressive Disorder in Women
J. Montalvo-Ortiz, S. Nagamatsu, Zhongshan Cheng, H. Kranzler +1 more
2021Biological Psychiatry0 citations
Semantic Scholar
DNA methylation changes in African American women with a history of preterm birth from the InterGEN study
Veronica Barcelona, J. Montalvo-Ortiz, M. Wright, S. Nagamatsu +4 more
2021BMC Genomic Data0 citations Open access
Semantic Scholar
PIPELINE DE EXPRESSÃO DIFERENCIAL EM R APLICADO À Arabidopsis thaliana
S. Nagamatsu, L. M. de Carvalho, Luciana Souto Mofatto, Nicholas Vinícius Silva +2 more
20200 citations
Semantic Scholar
Copy-number variation of xylose isomerase for efficient adaptive evolution of engineered industrial Saccharomyces cerevisiae strain
J. Bueno, G. Pereira, S. Nagamatsu, L. D. dos Santos +2 more
20160 citations Open access
Semantic Scholar

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J. Montalvo-Ortiz×32
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Diana L. Núñez-Ríos×17
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Diana L. Núñez-Ríos — researcher profile on SciRah
J. Martínez-Magaña×16
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J. Martínez-Magaña — researcher profile on SciRah
M. Carazzolle×10
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M. Carazzolle — researcher profile on SciRah

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Y. Hurd — researcher profile on SciRah

J. Gelernter×8

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J. Gelernter — researcher profile on SciRah

Diego E Andrade-Brito×7

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G. Rompala — researcher profile on SciRah

R. Polimanti×6

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Gregory Rompala×5

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Gregory Rompala — researcher profile on SciRah