A. Busia

Most-cited papers

1. Optimal trade-off control in machine learning–based library design, with application to adeno-associated virus (AAV) for gene therapy

   Danqing Zhu, David H. Brookes, A. Busia, A. Carneiro +11 more

   2021bioRxiv75 citations Open access

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2. A deep learning approach to pattern recognition for short DNA sequences

   A. Busia, G. Dahl, Clara Fannjiang, David H. Alexander +5 more

   2018bioRxiv61 citations Open access

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3. Next-Step Conditioned Deep Convolutional Neural Networks Improve Protein Secondary Structure Prediction

   A. Busia, N. Jaitly

   2017arXiv.org48 citations Open access

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4. Integrated lake and reservoir management: World Bank approach and experience.

   W. Ayres, A. Busia, A. Dinar, R. Hirji +3 more

   199731 citations

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5. A view of estimation of distribution algorithms through the lens of expectation-maximization

   David H. Brookes, A. Busia, Clara Fannjiang, Kevin P. Murphy +1 more

   2019GECCO Companion24 citations Open access

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6. BioNeMo Framework: a modular, high-performance library for AI model development in drug discovery

   P. John, Dejun Lin, P. Binder, Malcolm Greaves +83 more

   2024arXiv.org23 citations

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7. Protein Secondary Structure Prediction Using Deep Multi-scale Convolutional Neural Networks and Next-Step Conditioning

   A. Busia, Jasmine Collins, N. Jaitly

   2016arXiv.org21 citations

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8. MBE: model-based enrichment estimation and prediction for differential sequencing data

   A. Busia, J. Listgarten

   2023Genome Biology6 citations Open access

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9. Activity and specificity trade-offs in adenine base editors

   Maria Lukarska, L. Oltrogge, Hunter M. Nisonoff, Yaeko Long +6 more

   2026bioRxiv1 citations Open access

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10. Model-based differential sequencing analysis

    A. Busia, J. Listgarten

    2023bioRxiv1 citations Open access

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11. Megascale recombination generates millions of catalytically competent PETases

    Pete Heinzelman, Hunter M. Nisonoff, A. Busia, Jennifer Listgarten +1 more

    2026bioRxiv0 citations Open access

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12. Learning to Design Protein and DNA Libraries

    A. Busia

    20230 citations

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13. The Color Purple: Conversations About the Film

    John C. Tibbetts, Steven Spielberg, Margaret Avery, A. Busia +6 more

    20100 citations

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14. The seasons of Beento Blackbird : a novel

    A. Busia

    19970 citations

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15. The seasons of Beento Blackbird

    Pamela J. Olúbùnmi Smith, A. Busia

    19960 citations

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