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Yevgen P. Yurenko · SciRah

Researcher profile · Semantic Scholar

Yevgen P. Yurenko

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Yevgen P. Yurenko — researcher profile on SciRah

h-index: 15
Works: 28
Citations: 848

Most-cited papers

Intermolecular CH···O/N H-bonds in the biologically important pairs of natural nucleobases: a thorough quantum-chemical study
O. O. Brovarets’, Yevgen P. Yurenko, D. Hovorun
2014Journal of Biomolecular Structure and Dynamics138 citations
Semantic Scholar
Intramolecular CH…O Hydrogen Bonds in the AI and BI DNA-like Conformers of Canonical Nucleosides and their Watson-Crick Pairs. Quantum Chemical and AIM Analysis
Yevgen P. Yurenko, R. Zhurakivsky, S. P. Samijlenko, D. Hovorun
2011Journal of Biomolecular Structure and Dynamics99 citations
Semantic Scholar
The significant role of the intermolecular CH⋯O/N hydrogen bonds in governing the biologically important pairs of the DNA and RNA modified bases: a comprehensive theoretical investigation
O. O. Brovarets’, Yevgen P. Yurenko, D. Hovorun
2015Journal of Biomolecular Structure and Dynamics84 citations Open access
Semantic Scholar
Can DNA-binding proteins of replisome tautomerize nucleotide bases? Ab initio model study
O. O. Brovarets’, Yevgen P. Yurenko, I. Dubey, D. Hovorun
2012Journal of Biomolecular Structure and Dynamics70 citations
Semantic Scholar
Exploring non-covalent interactions in guanine- and xanthine-based model DNA quadruplex structures: a comprehensive quantum chemical approach.
Yevgen P. Yurenko, J. Novotný, V. Sklenar, R. Marek
2014Physical Chemistry, Chemical Physics - PCCP63 citations Open access
Semantic Scholar
Ab initio comprehensive conformational analysis of 2'-deoxyuridine, the biologically significant DNA minor nucleoside, and reconstruction of its low-temperature matrix infrared spectrum.
Yevgen P. Yurenko, R. Zhurakivsky, M. Ghomi, S. P. Samijlenko +1 more
2008Journal of Physical Chemistry B60 citations
Semantic Scholar
How many conformers determine the thymidine low-temperature matrix infrared spectrum? DFT and MP2 quantum chemical study.
Yevgen P. Yurenko, R. Zhurakivsky, M. Ghomi, S. P. Samijlenko +1 more
2007Journal of Physical Chemistry B60 citations
Semantic Scholar
Tautomeric equilibrium of uracil and thymine in model protein-nucleic acid contacts. Spectroscopic and quantum chemical approach.
S. P. Samijlenko, Yevgen P. Yurenko, A. Stepanyugin, D. Hovorun
2010Journal of Physical Chemistry B58 citations
Semantic Scholar
Comprehensive conformational analysis of the nucleoside analogue 2'-beta-deoxy-6-azacytidine by DFT and MP2 calculations.
Yevgen P. Yurenko, R. Zhurakivsky, M. Ghomi, S. P. Samijlenko +1 more
2007Journal of Physical Chemistry B48 citations
Semantic Scholar
Structural and energetic properties of the potential HIV-1 reverse transcriptase inhibitors d4A and d4G: a comprehensive theoretical investigation
A. Ponomareva, Yevgen P. Yurenko, R. Zhurakivsky, T. van Mourik +1 more
2014Journal of Biomolecular Structure and Dynamics31 citations Open access
Semantic Scholar
Nucleic Acid Quadruplexes Based on 8-Halo-9-deazaxanthines: Energetics and Noncovalent Interactions in Quadruplex Stems.
Yevgen P. Yurenko, J. Novotný, M. Mitoraj, V. Sklenar +2 more
2014Journal of Chemical Theory and Computation21 citations Open access
Semantic Scholar
Tailoring the properties of quadruplex nucleobases for biological and nanomaterial applications.
J. Novotný, Yevgen P. Yurenko, P. Kulhánek, R. Marek
2014Physical Chemistry, Chemical Physics - PCCP18 citations
Semantic Scholar
Mutations at hypothetical binding site 2 in insulin and insulin-like growth factors 1 and 2 result in receptor- and hormone-specific responses
K. Macháčková, Květoslava Mlčochová, Pavlo Potalitsyn, K. Hanková +15 more
2019Journal of Biological Chemistry16 citations Open access
Semantic Scholar
Anion-π Interactions in Flavoproteins Involve a Substantial Charge-Transfer Component.
Yevgen P. Yurenko, S. Bazzi, R. Marek, J. Kozelka
2017Chemistry15 citations Open access
Semantic Scholar
Designing a New Class of Bases for Nucleic Acid Quadruplexes and Quadruplex-Active Ligands.
S. Bazzi, J. Novotný, Yevgen P. Yurenko, R. Marek
2015Chemistry15 citations
Semantic Scholar
Weak Supramolecular Interactions Governing Parallel and Antiparallel DNA Quadruplexes: Insights from Large-Scale Quantum Mechanics Analysis of Experimentally Derived Models.
Yevgen P. Yurenko, J. Novotný, R. Marek
2017Chemistry11 citations
Semantic Scholar
Conformational Landscape of the Nucleoside Reverse Transcriptase Inhibitor d4T: a Comprehensive Quantum-Chemical Approach
A. Ponomareva, Yevgen P. Yurenko, R. Zhurakivsky, T. van Mourik +1 more
201311 citations
Semantic Scholar
Nucleotides containing variously modified sugars: energetics, structure, and mechanical properties.
Yevgen P. Yurenko, J. Novotný, T. Nikolaienko, R. Marek
2016Physical Chemistry, Chemical Physics - PCCP8 citations
Semantic Scholar
Substituting CF2 for O4' in Components of Nucleic Acids: Towards Systems with Reduced Propensity to Form Abasic Lesions.
Yevgen P. Yurenko, J. Novotný, V. Sklenar, R. Marek
2015Chemistry7 citations
Semantic Scholar
Does non-empirical quantum chemistry allow understanding nature of purine-purine mismatches formation by high fidelity DNA polymerases?
O. С. Kochina, Yevgen P. Yurenko, D. Hovorun
2007Biopolymers and Cell6 citations Open access
Semantic Scholar
Low-frequency Raman spectra of polycrystalline ribonucleosides
D. Hovorun, Ya. R. Mishchuk, Yevgen P. Yurenko
20024 citations Open access
Semantic Scholar
The significant role of the intermolecular CHMIDLINE HORIZONTAL ELLIPSISO/N hydrogen bonds in governing the biologically important pairs of the DNA and RNA modified bases: a comprehensive theoretical investigation
O. O. Brovarets’, Yevgen P. Yurenko, D. Hovorun
20153 citations
Semantic Scholar
Helquat dyes targeting G-quadruplexes as a new class of anti-HIV-1 inhibitors
Marcela Pávová, P. E. Reyes-Gutierrez, Jaroslav Kozák, Juraj Dobiáš +4 more
2023Scientific Reports2 citations Open access
Semantic Scholar
Multiscale Computational Protocols for Accurate Residue Interactions at the Flexible Insulin–Receptor Interface
Yevgen P. Yurenko, Anja Muždalo, Michaela Černeková, Adam Pecina +5 more
2025Journal of Chemical Information and Modeling1 citations
Semantic Scholar
Unraveling the coordination isomerism by ligand hyperfine NMR shifts
Dora Cidlinská, J. Chyba, M. Munzarová, Yevgen P. Yurenko +2 more
2026Chemical Science0 citations Open access
Semantic Scholar
Catalytic Mechanism of Formate Dehydrogenase: Does Rotation of Formate Provide the Impetus for Surmounting the Activation Energy Barrier?
Yevgen P. Yurenko, Jan Novotný, R. Marek, Jiří Kozelka
2024ChemistrySelect0 citations Open access
Semantic Scholar
Structures, molecular dynamics trajectories and parameter files for Helidye1-DNA complexes
Yevgen P. Yurenko, M. Lepšík, Juraj Dobiáš
20190 citations
Semantic Scholar
Designing Nucleic Acid Bases for Quadruplexes
J. Novotný, Yevgen P. Yurenko, R. Marek
20150 citations
Semantic Scholar

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J. Novotný×8
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