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W. Cresko · SciRah

Researcher profile · Semantic Scholar

W. Cresko

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W. Cresko — researcher profile on SciRah

h-index: 39
Works: 120
Citations: 17K

Most-cited papers

Stacks: an analysis tool set for population genomics
J. Catchen, Paul A Hohenlohe, S. Bassham, A. Amores +1 more
2013Molecular Ecology3,892 citations Open access
Semantic Scholar
Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences
J. Catchen, A. Amores, Paul A Hohenlohe, W. Cresko +1 more
2011G3: Genes, Genomes, Genetics1,992 citations Open access
Semantic Scholar
Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags
Paul A Hohenlohe, S. Bassham, P. Etter, Nicholas Stiffler +2 more
2010PLoS Genetics1,465 citations Open access
Semantic Scholar
Resolving postglacial phylogeography using high-throughput sequencing
K. Emerson, C. Merz, J. Catchen, Paul A Hohenlohe +3 more
2010Proceedings of the National Academy of Sciences of the United States of America467 citations Open access
Semantic Scholar
SNP Discovery and Genotyping for Evolutionary Genetics Using RAD Sequencing
P. Etter, S. Bassham, Paul A Hohenlohe, Eric A. Johnson +1 more
2011Methods in molecular biology403 citations Open access
Semantic Scholar
Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes
Paul A Hohenlohe, S. Bassham, Mark C. Currey, W. Cresko
2012Philosophical Transactions of the Royal Society B: Biological Sciences224 citations Open access
Semantic Scholar
Local De Novo Assembly of RAD Paired-End Contigs Using Short Sequencing Reads
P. Etter, Jessica L. Preston, S. Bassham, W. Cresko +1 more
2011PLoS ONE212 citations Open access
Semantic Scholar
USING POPULATION GENOMICS TO DETECT SELECTION IN NATURAL POPULATIONS: KEY CONCEPTS AND METHODOLOGICAL CONSIDERATIONS
Paul A Hohenlohe, Patrick C. Phillips, W. Cresko
2010INTERNATIONAL JOURNAL PLANT SCIENCES198 citations Open access
Semantic Scholar
Evolution of stickleback in 50 years on earthquake-uplifted islands
Emily A. Lescak, S. Bassham, J. Catchen, O. Gelmond +3 more
2015Proceedings of the National Academy of Sciences of the United States of America175 citations Open access
Semantic Scholar
The population structure and recent colonization history of Oregon threespine stickleback determined using RAD-seq
J. Catchen, S. Bassham, T. Wilson, Mark C. Currey +3 more
2013Molecular Ecology140 citations Open access
Semantic Scholar
Ancient genomic variation underlies repeated ecological adaptation in young stickleback populations
Thomas C. Nelson, W. Cresko
2017bioRxiv135 citations Open access
Semantic Scholar
CRYPTIC GENETIC VARIATION AND BODY SIZE EVOLUTION IN THREESPINE STICKLEBACK
Katrina McGuigan, N. Nishimura, Mark C. Currey, D. Hurwit +1 more
2011Evolution; international journal of organic evolution122 citations
Semantic Scholar
Effects of crossovers between homeologs on inheritance and population genomics in polyploid-derived salmonid fishes.
F. Allendorf, S. Bassham, W. Cresko, M. T. Limborg +2 more
2015Journal of Heredity102 citations
Semantic Scholar
The genome of the Gulf pipefish enables understanding of evolutionary innovations
C. Small, S. Bassham, J. Catchen, A. Amores +4 more
2016Genome Biology82 citations Open access
Semantic Scholar
Rapid Evolution of Phenotypic Plasticity and Shifting Thresholds of Genetic Assimilation in the Nematode Caenorhabditis remanei
K. Sikkink, Rose M. Reynolds, Catherine M. Ituarte, W. Cresko +1 more
2014G3: Genes, Genomes, Genetics78 citations Open access
Semantic Scholar
Population genomic analysis of model and nonmodel organisms using sequenced RAD tags.
Paul A Hohenlohe, J. Catchen, W. Cresko
2012Methods in molecular biology75 citations
Semantic Scholar
So, You Want to Use Next Generation Sequencing In Marine Systems? Insight from the Pan Pacific Advanced Studies Institute
D. Willette, F. Allendorf, P. H. Barber, D. Barshis +9 more
201473 citations
Semantic Scholar
Innate immune responses to gut microbiota differ between oceanic and freshwater threespine stickleback populations
Kathryn C. Milligan-Myhre, C. Small, E. Mittge, M. Agarwal +3 more
2016Disease Models & Mechanisms64 citations Open access
Semantic Scholar
Repeated Selection of Alternatively Adapted Haplotypes Creates Sweeping Genomic Remodeling in Stickleback
S. Bassham, J. Catchen, Emily A. Lescak, F. V. von Hippel +1 more
2018Genetics60 citations Open access
Semantic Scholar
Distinct Lineages of Schistocephalus Parasites in Threespine and Ninespine Stickleback Hosts Revealed by DNA Sequence Analysis
N. Nishimura, D. Heins, Ryan O. Andersen, I. Barber +1 more
2011PLoS ONE44 citations Open access
Semantic Scholar
Independent Axes of Genetic Variation and Parallel Evolutionary Divergence Of Opercle Bone Shape in Threespine Stickleback
C. Kimmel, W. Cresko, Patrick C. Phillips, B. Ullmann +5 more
2011Evolution; international journal of organic evolution42 citations Open access
Semantic Scholar
Perchlorate disrupts embryonic androgen synthesis and reproductive development in threespine stickleback without changing whole-body levels of thyroid hormone
A. M. Petersen, D. Dillon, Richard R. Bernhardt, R. Torunsky +4 more
2014General and Comparative Endocrinology39 citations Open access
Semantic Scholar
Shared Environment and Genetics Shape the Gut Microbiome after Infant Adoption
Hannah F. Tavalire, Diana M. Christie, L. Leve, N. Ting +2 more
2021mBio35 citations Open access
Semantic Scholar
Host Genotype and Microbiota Contribute Asymmetrically to Transcriptional Variation in the Threespine Stickleback Gut
C. Small, Kathryn C. Milligan-Myhre, S. Bassham, K. Guillemin +1 more
2017Genome Biology and Evolution35 citations Open access
Semantic Scholar
Developmental dissociation in morphological evolution of the stickleback opercle
C. Kimmel, Paul A Hohenlohe, B. Ullmann, Mark C. Currey +1 more
2012Evolution & Development35 citations Open access
Semantic Scholar
Conservation of the photoperiodic neuroendocrine axis among vertebrates: evidence from the teleost fish, Gasterosteus aculeatus
Conor S. O'Brien, Ryan Bourdo, W. Bradshaw, C. Holzapfel +1 more
2012General and Comparative Endocrinology34 citations Open access
Semantic Scholar
Population Genetic Divergence and Environment Influence the Gut Microbiome in Oregon Threespine Stickleback
Robert A Steury, Mark C. Currey, W. Cresko, B. Bohannan
2019Genes33 citations Open access
Semantic Scholar
Allometric change accompanies opercular shape evolution in Alaskan threespine sticklebacks
C. Kimmel, W. Aguirre, B. Ullmann, Mark C. Currey +1 more
200833 citations
Semantic Scholar
Developmental timing of sodium perchlorate exposure alters angiogenesis, thyroid follicle proliferation and sexual maturation in stickleback
Christoff G. Furin, F. V. von Hippel, J. Postlethwait, C. Buck +2 more
2015General and Comparative Endocrinology31 citations Open access
Semantic Scholar
Advancing human disease research with fish evolutionary mutant models
Emily A. Beck, Hope M. Healey, C. Small, Mark C. Currey +3 more
2021Trends in Genetics30 citations Open access
Semantic Scholar
ENVIRONMENTALLY INDUCED CHANGES IN CORRELATED RESPONSES TO SELECTION REVEAL VARIABLE PLEIOTROPY ACROSS A COMPLEX GENETIC NETWORK
K. Sikkink, Rose M. Reynolds, W. Cresko, Patrick C. Phillips
2015Evolution; international journal of organic evolution30 citations Open access
Semantic Scholar
Quantitative genetic variation in static allometry in the threespine stickleback.
Katrina McGuigan, N. Nishimura, Mark C. Currey, D. Hurwit +1 more
2010Integrative and Comparative Biology30 citations
Semantic Scholar
A Few Stickleback Suffice for the Transport of Alleles to New Lakes
Jared G. Galloway, W. Cresko, Peter L. Ralph
2019G3: Genes, Genomes, Genetics29 citations Open access
Semantic Scholar
The transgenerational effects of heat stress in the nematode Caenorhabditis remanei are negative and rapidly eliminated under direct selection for increased stress resistance in larvae
K. Sikkink, Catherine M. Ituarte, Rose M. Reynolds, W. Cresko +1 more
2014Genomics29 citations Open access
Semantic Scholar
Peer Review #1 of "Everything you always wanted to know about gene flow in tropical landscapes (but were afraid to ask) (v0.2)"
W. Pereira, J. Veiga, Amanda R. Silva, C. da +331 more
201924 citations Open access
Semantic Scholar
Footprints in time: comparative quantitative trait loci mapping of the pitcher-plant mosquito, Wyeomyia smithii
W. Bradshaw, K. Emerson, J. Catchen, W. Cresko +1 more
2012Proceedings of the Royal Society of London. Biological Sciences24 citations Open access
Semantic Scholar
Effectiveness of a COVID-19 Testing Outreach Intervention for Latinx Communities
David S. DeGarmo, Stephanie DeAnda, Camille C. Cioffi, Hannah F. Tavalire +11 more
2022JAMA Network Open22 citations Open access
Semantic Scholar
Naturalistic Experimental Designs as Tools for Understanding the Role of Genes and the Environment in Prevention Research
L. Leve, J. Neiderhiser, G. Harold, Misaki N. Natsuaki +2 more
2018Prevention Science22 citations Open access
Semantic Scholar
Genome‐wide single nucleotide polymorphism markers reveal population structure and dispersal direction of an expanding nuisance algal bloom species
Karin Rengefors, Raphael Gollnisch, Ingrid Sassenhagen, Karolina Härnström Aloisi +6 more
2021Molecular Ecology21 citations Open access
Semantic Scholar
Association between integration structure and functional evolution in the opercular four-bar apparatus of the threespine stickleback, Gasterosteus aculeatus (Pisces: Gasterosteidae)
H. Jamniczky, Emily E. Harper, Rebecca E. Garner, W. Cresko +3 more
201420 citations Open access
Semantic Scholar
Single-cell Iso-Sequencing enables rapid genome annotation for scRNAseq analysis
Hope M. Healey, S. Bassham, W. Cresko
2021bioRxiv19 citations Open access
Semantic Scholar
Environmental and Evolutionary Drivers of the Modular Gene Regulatory Network Underlying Phenotypic Plasticity for Stress Resistance in the Nematode Caenorhabditis remanei
K. Sikkink, Rose M. Reynolds, Catherine M. Ituarte, W. Cresko +1 more
2018G3: Genes, Genomes, Genetics19 citations Open access
Semantic Scholar
Latitudinal variation in photoperiodic response of the three-spined stickleback Gasterosteus aculeatus in western North America
Q. S. Yeates-Burghart, Conor S. O'Brien, W. Cresko, C. Holzapfel +1 more
2009Journal of Fish Biology19 citations Open access
Semantic Scholar
Host genomic variation shapes gut microbiome diversity in threespine stickleback fish
C. Small, Emily A. Beck, Mark C. Currey, Hannah F. Tavalire +2 more
2022bioRxiv18 citations Open access
Semantic Scholar
Alternative strategies for development of a reference transcriptome for quantification of allele specific expression in organisms having sparse genomic resources
Ying-Jia Shen, Tzintzuni I. Garcia, Vagmita Pabuwal, Mikki G. Boswell +6 more
2012Comparative Biochemistry and Physiology - Part D:Genomics and Proteomics18 citations Open access
Semantic Scholar
Leafy and weedy seadragon genomes connect genic and repetitive DNA features to the extravagant biology of syngnathid fishes
C. Small, Hope M. Healey, Mark C. Currey, Emily A. Beck +4 more
2021bioRxiv16 citations Open access
Semantic Scholar
Exogenous iodide ameliorates perchlorate-induced thyroid phenotypes in threespine stickleback
Alison Gardell, F. V. von Hippel, Elise M. Adams, D. Dillon +4 more
2016General and Comparative Endocrinology15 citations Open access
Semantic Scholar
Highly Reproducible 16S Sequencing Facilitates Measurement of Host Genetic Influences on the Stickleback Gut Microbiome
C. Small, Mark C. Currey, Emily A. Beck, S. Bassham +1 more
2018mSystems13 citations Open access
Semantic Scholar
Perchlorate Exposure Reduces Primordial Germ Cell Number in Female Threespine Stickleback
A. M. Petersen, Nathanial C. Earp, Mandy E. Redmond, J. Postlethwait +3 more
2016PLoS ONE13 citations Open access
Semantic Scholar
Admixture of ancient mitochondrial lineages in three‐spined stickleback populations from the North Pacific
Emily A. Lescak, Robert W. Marcotte, Leah A. Kenney, Frank A. Hippel +4 more
201512 citations
Semantic Scholar

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