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Erik D. Holmstrom · SciRah

Researcher profile · Semantic Scholar

Erik D. Holmstrom

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Erik D. Holmstrom — researcher profile on SciRah

h-index: 22
Works: 47
Citations: 1,294

Most-cited papers

Molecular-crowding effects on single-molecule RNA folding/unfolding thermodynamics and kinetics
N. Dupuis, Erik D. Holmstrom, D. Nesbitt
2014Proceedings of the National Academy of Sciences of the United States of America144 citations Open access
Semantic Scholar
The SARS-CoV-2 Conserved Macrodomain Is a Mono-ADP-Ribosylhydrolase
Yousef M. O. Alhammad, M. Kashipathy, Anuradha Roy, J. Gagné +9 more
2020Journal of Virology116 citations Open access
Semantic Scholar
Synthesis and applications of RNAs with position-selective labeling and mosaic composition
Yu Liu, Erik D. Holmstrom, Jin-Wei Zhang, P. Yu +10 more
2015Nature108 citations Open access
Semantic Scholar
Single-molecule kinetics reveal cation-promoted DNA duplex formation through ordering of single-stranded helices.
N. Dupuis, Erik D. Holmstrom, D. Nesbitt
2013Biophysical Journal106 citations Open access
Semantic Scholar
Transition path times of coupled folding and binding reveal the formation of an encounter complex
Flurin Sturzenegger, F. Zosel, Erik D. Holmstrom, Karin J. Buholzer +3 more
2018Nature Communications92 citations Open access
Semantic Scholar
Binding without folding - the biomolecular function of disordered polyelectrolyte complexes.
B. Schuler, Alessandro Borgia, Madeleine B. Borgia, Pétur O. Heidarsson +3 more
2019Current Opinion in Structural Biology81 citations
Semantic Scholar
Disordered RNA chaperones can enhance nucleic acid folding via local charge screening
Erik D. Holmstrom, Zhao-Wei Liu, D. Nettels, R. Best +1 more
2019Nature Communications67 citations Open access
Semantic Scholar
Entropic origin of Mg2+-facilitated RNA folding
Julie L. Fiore, Erik D. Holmstrom, D. Nesbitt
2012Proceedings of the National Academy of Sciences of the United States of America66 citations Open access
Semantic Scholar
“Distances, distance distributions, and ensembles of unfolded and intrinsically disordered proteins from single-molecule FRET”
Erik D. Holmstrom, A. Holla, Wenwei Zheng, D. Nettels +2 more
2018Methods in Enzymology49 citations Open access
Semantic Scholar
Mechanistic Insights into Cofactor-Dependent Coupling of RNA Folding and mRNA Transcription/Translation by a Cobalamin Riboswitch
J. Polaski, Erik D. Holmstrom, D. Nesbitt, R. Batey
2016Cell Reports42 citations Open access
Semantic Scholar
Incorporation of isotopic, fluorescent, and heavy-atom-modified nucleotides into RNAs by position-selective labeling of RNA
Yu Liu, Erik D. Holmstrom, P. Yu, K. Tan +5 more
2018Nature Protocols39 citations Open access
Semantic Scholar
Thermodynamic Origins of Monovalent Facilitated RNA Folding
Erik D. Holmstrom, Julie L. Fiore, D. Nesbitt
2012Biochemistry38 citations Open access
Semantic Scholar
Single-Molecule Conformational Dynamics of a Biologically Functional Hydroxocobalamin Riboswitch
Erik D. Holmstrom, J. Polaski, R. Batey, D. Nesbitt
2014Journal of the American Chemical Society37 citations Open access
Semantic Scholar
Recognition of single-stranded nucleic acids by small-molecule splicing modulators
Zhichao Tang, Sana Akhter, Ankita Ramprasad, Xiao Wang +10 more
2021Nucleic Acids Research32 citations Open access
Semantic Scholar
Kinetic and thermodynamic origins of osmolyte-influenced nucleic acid folding.
Erik D. Holmstrom, N. Dupuis, D. Nesbitt
2015Journal of Physical Chemistry B32 citations
Semantic Scholar
Dispersion Correction Alleviates Dye Stacking of Single-Stranded DNA and RNA in Simulations of Single-Molecule Fluorescence Experiments.
Kara K. Grotz, Mark F. Nueesch, Erik D. Holmstrom, M. Heinz +3 more
2018Journal of Physical Chemistry B28 citations Open access
Semantic Scholar
Biophysical Insights from Temperature-Dependent Single-Molecule Förster Resonance Energy Transfer.
Erik D. Holmstrom, D. Nesbitt
2016Annual review of physical chemistry (Print)28 citations
Semantic Scholar
Conformational Plasticity of Hepatitis C Virus Core Protein Enables RNA-Induced Formation of Nucleocapsid-like Particles.
Erik D. Holmstrom, D. Nettels, B. Schuler
2017Journal of Molecular Biology25 citations Open access
Semantic Scholar
Single-Molecule Fluorescence Resonance Energy Transfer Studies of the Human Telomerase RNA Pseudoknot: Temperature-/Urea-Dependent Folding Kinetics and Thermodynamics
Erik D. Holmstrom, D. Nesbitt
2014Journal of Physical Chemistry B25 citations Open access
Semantic Scholar
Pulsed IR heating studies of single-molecule DNA duplex dissociation kinetics and thermodynamics.
Erik D. Holmstrom, N. Dupuis, D. Nesbitt
2014Biophysical Journal25 citations Open access
Semantic Scholar
The role of counterion valence and size in GAAA tetraloop-receptor docking/undocking kinetics.
Julie L. Fiore, Erik D. Holmstrom, Larry R. Fiegland, J. Hodak +1 more
2012Journal of Molecular Biology25 citations Open access
Semantic Scholar
Real-Time Infrared Overtone Laser Control of Temperature in Picoliter H2O Samples: “Nanobathtubs” for Single Molecule Microscopy
Erik D. Holmstrom, D. Nesbitt
2010Journal of Physical Chemistry Letters25 citations Open access
Semantic Scholar
Nanosecond chain dynamics of single-stranded nucleic acids
Mark F. Nüesch, Lisa M. Pietrek, Erik D. Holmstrom, D. Nettels +5 more
2023Nature Communications16 citations Open access
Semantic Scholar
Tests of Kramers' Theory at the Single-Molecule Level: Evidence for Folding of an Isolated RNA Tertiary Interaction at the Viscous Speed Limit.
N. Dupuis, Erik D. Holmstrom, D. Nesbitt
2018Journal of Physical Chemistry B14 citations
Semantic Scholar
Single-Molecule FRET Reveals Three Conformations for the TLS Domain of Brome Mosaic Virus Genome.
Mario Vieweger, Erik D. Holmstrom, D. Nesbitt
2015Biophysical Journal13 citations Open access
Semantic Scholar
Real-time compaction of nanoconfined DNA by an intrinsically disordered macromolecular counterion
Rajhans Sharma, Sriram Kk, Erik D. Holmstrom, Fredrik Westerlund
2020Biochemical and Biophysical Research Communications - BBRC11 citations Open access
Semantic Scholar
Dancing in the Dark: An Analysis of the Live Entertainment Industry and the Deceptive Market Practices of Ticketmaster and Live Nation
Erik D. Holmstrom
2019Western Journal of Legal Studies6 citations Open access
Semantic Scholar
Disordered RNA Chaperones Enhance Nucleic Acid Folding via Local Charge Screening
Erik D. Holmstrom, Zhao-Wei Liu, D. Nettels, R. Best +1 more
2019Biophysical Journal2 citations Open access
Semantic Scholar
Transition path times of coupled folding and binding reveal the formation of an encounter complex
Flurin Sturzenegger, F. Zosel, Erik D. Holmstrom, Karin J. Buholzer +3 more
2018Nature Communications2 citations Open access
Semantic Scholar
Apolar chemical environments compact unfolded RNAs and can promote folding
Shamal M Gunawardhana, Erik D. Holmstrom
2021Biophysics Reports1 citations Open access
Semantic Scholar
BPS2026 – Thermodynamic influence of cationic cluster size on protein-assisted nucleic acid folding
Gabrielle Perkins, Parnian Arafi, Kathryn M. Lebold, Erik D. Holmstrom
2026Biophysical Journal0 citations
Semantic Scholar
BPS2026 – Intragenomic RNA-RNA contacts within the hepatitis C virus modulate the conformations of 3′X RNA
E. P. Rogers, Parker D Sperstad, Erik D. Holmstrom
2026Biophysical Journal0 citations
Semantic Scholar
BPS2026 – Mechanism of HCV 3'X RNA dimerization
Erik D. Holmstrom, Parker D Sperstad
2026Biophysical Journal0 citations
Semantic Scholar
Uncovering the biophysical mechanisms of riboregulatory interactions involving the hepatitis C virus 3'X RNA using single-molecule FRET.
Parker D Sperstad, Erik D. Holmstrom
2023Biophysical Journal0 citations Open access
Semantic Scholar
Reductionist insights into how chaperone charge influences RNA folding.
Gabrielle Perkins, Erik D. Holmstrom
2023Biophysical Journal0 citations Open access
Semantic Scholar
Mechanistic insights into the 2-step dimerization process FO the hepatitis C virus RNA genome.
Parker D Sperstad, Erik D. Holmstrom
2023Biophysical Journal0 citations Open access
Semantic Scholar
Enhanced compaction and folding of RNAs in apolar chemical environments
Shamal M Gunawardhana, Erik D. Holmstrom
2022Biophysical Journal0 citations Open access
Semantic Scholar
Single-molecule binding studies of antiviral compounds targeting the hepatitis c virus core protein
S. Nepal, Erik D. Holmstrom
2022Biophysical Journal0 citations Open access
Semantic Scholar
“Distances, distance distributions, and ensembles of unfolded and intrinsically disordered proteins from single-molecule FRET”
Erik D. Holmstrom, A. Holla, Wenwei Zheng, Daniel Nettles +2 more
20210 citations
Semantic Scholar
Using Single-Molecule Spectroscopy to Dissect the Hepatitis C Virus Nucleocapsid Assembly Pathway
S. Sen, Shamal Ungawel Durayalage, Erik D. Holmstrom
20200 citations Open access
Semantic Scholar
Conformational Ensembles and Dynamics of Single-Stranded Nucleic Acids using High-Resolution Single-Molecule Fluorescence Spectroscopy
Mark F. Nueesch, Erik D. Holmstrom, D. Nettels, B. Schuler
20200 citations Open access
Semantic Scholar
Real-Time Condensation of Nanoconfined DNA by an Intrinsically Disordered Polycationic Protein
Rajhans Sharma, Sriram Kk, Erik D. Holmstrom, Fredrik Westerlund
20200 citations Open access
Semantic Scholar
Correction to “Single-Molecule Fluorescence Resonance Energy Transfer Studies of the Human Telomerase RNA Pseudoknot: Temperature-/Urea-Dependent Folding Kinetics and Thermodynamics”
Erik D. Holmstrom, D. Nesbitt
2014Journal of Physical Chemistry B0 citations Open access
Semantic Scholar
Folding in Human Telomerase RNA Pseudoknots: Kinetic and Thermodynamic Studies via Single-Molecule FRET
Erik D. Holmstrom, D. Nesbitt
20140 citations Open access
Semantic Scholar
Single-Molecule Kinetic and Thermodynamic Studies of Cosolute-Influenced Nucleic Acid Conformational Transitions
Erik D. Holmstrom
20140 citations
Semantic Scholar
Localized Heating of Single Oligonucleotides using Infrared Light
Erik D. Holmstrom, D. Nesbitt
20120 citations Open access
Semantic Scholar
Single Molecule FRET Studies of RNA Tertiary Folding: Elucidating the Thermodynamic and Kinetic Role of Na+ Cations
Erik D. Holmstrom, Julie L. Fiore, D. Nesbitt
20100 citations Open access
Semantic Scholar

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D. Nesbitt×20
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Julie L. Fiore×4

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