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S. Magness · SciRah

Researcher profile · Semantic Scholar

S. Magness

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S. Magness — researcher profile on SciRah

h-index: 48
Works: 168
Citations: 9,693

Most-cited papers

A microengineered collagen scaffold for generating a polarized crypt-villus architecture of human small intestinal epithelium
Yu-Li Wang, Dulan B. Gunasekara, Mark I. Reed, Matthew DiSalvo +4 more
2017Biomaterials334 citations Open access
Semantic Scholar
A High-Throughput Organoid Microinjection Platform to Study Gastrointestinal Microbiota and Luminal Physiology
Ian A. Williamson, Jason W. Arnold, L. Samsa, Liam T. Gaynor +7 more
2018Cellular and Molecular Gastroenterology and Hepatology222 citations Open access
Semantic Scholar
Impact of short-chain galactooligosaccharides on the gut microbiome of lactose-intolerant individuals
M. Azcarate-Peril, Andrew J. Ritter, D. Savaiano, A. Monteagudo-Mera +3 more
2016Proceedings of the National Academy of Sciences of the United States of America205 citations Open access
Semantic Scholar
A Proximal-to-Distal Survey of Healthy Adult Human Small Intestine and Colon Epithelium by Single-Cell Transcriptomics
Joseph Burclaff, R. Bliton, Keith A. Breau, M. T. Ok +6 more
2021bioRxiv192 citations Open access
Semantic Scholar
Self-renewing Monolayer of Primary Colonic or Rectal Epithelial Cells
Yu-Li Wang, Matthew DiSalvo, Dulan B. Gunasekara, Johanna S Dutton +10 more
2017Cellular and Molecular Gastroenterology and Hepatology185 citations Open access
Semantic Scholar
Reserve Stem Cells in Intestinal Homeostasis and Injury
E. Bankaitis, A. Ha, Calvin J. Kuo, S. Magness
2018Gastroenterology163 citations Open access
Semantic Scholar
Formation of Human Colonic Crypt Array by Application of Chemical Gradients Across a Shaped Epithelial Monolayer
Yu-Li Wang, Raehyun Kim, Dulan B. Gunasekara, Mark I. Reed +6 more
2017Cellular and Molecular Gastroenterology and Hepatology161 citations Open access
Semantic Scholar
The pleiotropic effects of prebiotic galacto-oligosaccharides on the aging gut
Jason W. Arnold, J. Roach, Salvador Fabela, Emily Moorfield +7 more
2020Microbiome125 citations Open access
Semantic Scholar
Therapeutically engineered induced neural stem cells are tumour-homing and inhibit progression of glioblastoma
J. Bago, Adolfo R. Alfonso-Pecchio, Onyi Okolie, R. Dumitru +5 more
2016Nature Communications123 citations Open access
Semantic Scholar
SOX4 Promotes ATOH1-independent Intestinal Secretory Differentiation Toward Tuft and Enteroendocrine Fates
Adam D. Gracz, L. Samsa, M. Fordham, Danny C Trotier +8 more
2018Gastroenterology96 citations Open access
Semantic Scholar
Acute engagement of Gq-mediated signaling in the bed nucleus of the stria terminalis induces anxiety-like behavior
C. Mazzone, D. Pati, M. Michaelides, J. DiBerto +12 more
2016Molecular Psychiatry78 citations Open access
Semantic Scholar
IL22 Inhibits Epithelial Stem Cell Expansion in an Ileal Organoid Model
B. Zwarycz, Adam D. Gracz, Kristina R. Rivera, Ian A. Williamson +6 more
2018Cellular and Molecular Gastroenterology and Hepatology77 citations Open access
Semantic Scholar
Cftr Modulates Wnt/β-Catenin Signaling and Stem Cell Proliferation in Murine Intestine
Ashlee M. Strubberg, Jing-Hua Liu, N. Walker, Casey D. Stefanski +3 more
2017bioRxiv75 citations Open access
Semantic Scholar
TGFB1 Induces Fetal Reprogramming and Enhances Intestinal Regeneration
Lei Chen, Xia Qiu, Abigail Dupre, O. Pellon-Cardenas +20 more
2023Cell Stem Cell72 citations Open access
Semantic Scholar
Bioengineered Systems and Designer Matrices That Recapitulate the Intestinal Stem Cell Niche
Yu-Li Wang, Raehyun Kim, Samuel S. Hinman, B. Zwarycz +2 more
2018Cellular and Molecular Gastroenterology and Hepatology65 citations Open access
Semantic Scholar
NSAID-Induced Leaky Gut Modeled Using Polarized Monolayers of Primary Human Intestinal Epithelial Cells
A. Bhatt, Dulan B. Gunasekara, Jennifer E. Speer, Mark I. Reed +6 more
2017ACS Infectious Diseases53 citations Open access
Semantic Scholar
Interferon-λ3 Promotes Epithelial Defense and Barrier Function Against Cryptosporidium parvum Infection
Sylvia H Ferguson, D. Foster, B. Sherry, S. Magness +2 more
2019Cellular and Molecular Gastroenterology and Hepatology51 citations Open access
Semantic Scholar
Heterogeneity and dynamics of active Kras-induced dysplastic lineages from mouse corpus stomach
Jimin Min, Paige N. Vega, Amy C. Engevik, Janice A. Williams +9 more
2019Nature Communications44 citations Open access
Semantic Scholar
Dysplastic stem cell plasticity functions as a driving force for neoplastic transformation of pre-cancerous gastric mucosa
Jimin Min, Changqing Zhang, R. Bliton, B. Caldwell +13 more
2022Gastroenterology43 citations Open access
Semantic Scholar
A Roadmap for the Human Gut Cell Atlas
M. Zilbauer, K. James, Mandeep Kaur, Sebastian Pott +35 more
2023Nature reviews: Gastroenterology & hepatology42 citations Open access
Semantic Scholar
Integrated phosphorescence-based photonic biosensor (iPOB) for monitoring oxygen levels in 3D cell culture systems
Kristina R. Rivera, V. Pozdin, Ashlyn T. Young, Patrick D. Erb +3 more
2018Biosensors & bioelectronics42 citations Open access
Semantic Scholar
PAR2-dependent activation of GSK3β regulates the survival of colon stem/progenitor cells.
Imen Nasri, D. Bonnet, B. Zwarycz, E. d’Aldebert +12 more
2016American Journal of Physiology - Gastrointestinal and Liver Physiology32 citations Open access
Semantic Scholar
Genomewide CRISPR knockout screen identified PLAC8 as an essential factor for SADS-CoVs infection
Long-Ping V. Tse, Rita M. Meganck, Kenza C. Araba, B. Yount +12 more
2022Proceedings of the National Academy of Sciences of the United States of America31 citations Open access
Semantic Scholar
A monolayer of primary colonic epithelium generated on a scaffold with a gradient of stiffness for drug transport studies
Dulan B. Gunasekara, Jennifer E. Speer, Yu-Li Wang, Daniel L Nguyen +8 more
2018Analytical Chemistry31 citations Open access
Semantic Scholar
Quantitative classification of chromatin dynamics reveals regulators of intestinal stem cell differentiation
Jesse R. Raab, Deepthi Y Tulasi, Kortney E Wager, Jeremy M. Morowitz +2 more
2019Development28 citations Open access
Semantic Scholar
Development of arrayed colonic organoids for screening of secretagogues associated with enterotoxins
Dulan B. Gunasekara, Matthew DiSalvo, Yu-Li Wang, Daniel L Nguyen +5 more
2018Analytical Chemistry27 citations Open access
Semantic Scholar
In Vitro Polarization of Colonoids to Create an Intestinal Stem Cell Compartment
Peter J. Attayek, Asad A. Ahmad, Yu-Li Wang, Ian A. Williamson +3 more
2016PLoS ONE25 citations Open access
Semantic Scholar
Preservation of reserve intestinal epithelial stem cells following severe ischemic injury.
L. Gonzalez, A. Stewart, John M. Freund, C. Kucera +3 more
2019American Journal of Physiology - Gastrointestinal and Liver Physiology21 citations Open access
Semantic Scholar
Orphan Gpr182 suppresses ERK-mediated intestinal proliferation during regeneration and adenoma formation
Daniel O. Kechele, R. Blue, B. Zwarycz, Scott T. Espenschied +7 more
2017Journal of Clinical Investigation21 citations Open access
Semantic Scholar
In Vitro Generation of Mouse Colon Crypts
Yu-Li Wang, Dulan B. Gunasekara, Peter J. Attayek, Mark I. Reed +8 more
2017ACS Biomaterials Science & Engineering21 citations Open access
Semantic Scholar
Obesity facilitated colon cancer progression is mediated by increased diacylglycerol o-acyltransferases 1 and 2 (DGAT1/2) levels.
Jenisha Ghimire, M. Collins, Patricia Snarski, Angelle N. King +12 more
2024Gastroenterology19 citations Open access
Semantic Scholar
Efficient transgenesis and homology-directed gene targeting in monolayers of primary human small intestinal and colonic epithelial stem cells
Keith A. Breau, M. T. Ok, Ismael Gomez-Martinez, Joseph Burclaff +2 more
2021bioRxiv19 citations Open access
Semantic Scholar
Monoclonal Antibodies Reveal Dynamic Plasticity Between Lgr5- and Bmi1-Expressing Intestinal Cell Populations
N. R. Smith, John R. Swain, Paige S. Davies, A. Gallagher +6 more
2018Cellular and Molecular Gastroenterology and Hepatology18 citations Open access
Semantic Scholar
A Leaky Human Colon Model Reveals Uncoupled Apical/Basal Cytotoxicity in Early Clostridioides difficile Toxin Exposure
M. T. Ok, Jintong Liu, R. Bliton, Caroline M. Hinesley +5 more
2022bioRxiv16 citations Open access
Semantic Scholar
A Planar Culture Model of Human Absorptive Enterocytes Reveals Metformin Increases Fatty Acid Oxidation and Export
Ismael Gomez-Martinez, R. Bliton, Keith A. Breau, Michael J. Czerwinski +4 more
2022Cellular and Molecular Gastroenterology and Hepatology15 citations Open access
Semantic Scholar
Isolation and Characterization of Single Cells from Zebrafish Embryos
L. Samsa, Nicole D. Fleming, S. Magness, Li Qian +1 more
2016Journal of Visualized Experiments15 citations Open access
Semantic Scholar
In Silico Identification and Experimental Validation of Peptide-Based Inhibitors Targeting Clostridium diffcile Toxin A
Xing-Qing Xiao, Sudeep Sarma, Stefano Menegatti, N. Crook +2 more
2021ACS Chemical Biology14 citations Open access
Semantic Scholar
Knockout of ClC-2 reveals critical functions of adherens junctions in colonic homeostasis and tumorigenicity.
Younggeon Jin, Dina M Ibrahim, S. Magness, A. Blikslager
2018American Journal of Physiology - Gastrointestinal and Liver Physiology14 citations Open access
Semantic Scholar
Metabolic mapping of downstream network activity following CNO-induced activation of hM3Dq in BNST VGAT neurons
C. Mazzone, D. Pati, M. Michaelides, J. DiBerto +12 more
2018Molecular Psychiatry12 citations Open access
Semantic Scholar
Replicating Host-Microbiome Interactions: Harnessing Organ-on-a-Chip and Organoid Technologies to Model Vaginal and Lung Physiology.
Jade Coxon, Emily J. Linder, Caden Sweet, S. Magness +1 more
2025Annual Review of Biomedical Engineering9 citations Open access
Semantic Scholar
Sex Differences in Colonic Inflammation are Driven by Epithelial-Specific Expression of Estrogen Receptor Alpha
Guillermo A. Pereda, Adrian D. Kocinski, Alyssia V. Broncano, Sarah K. McNeer +6 more
2025Gastro Hep Advances8 citations Open access
Semantic Scholar
Design of 8-mer peptides that block Clostridioides difficile toxin A in intestinal cells
Sudeep Sarma, Carly M. Catella, Ellyce T. San Pedro, Xing-Qing Xiao +5 more
2023bioRxiv7 citations Open access
Semantic Scholar
Correction to: The pleiotropic effects of prebiotic galacto-oligosaccharides on the aging gut
Jason W. Arnold, J. Roach, Salvador Fabela, Emily Moorfield +7 more
2021Microbiome7 citations Open access
Semantic Scholar
Organoid Cultures for Assessing Intestinal Epithelial Differentiation and Function in Response to Type-2 Inflammation.
B. Zwarycz, Adam D. Gracz, S. Magness
2018Methods in molecular biology7 citations
Semantic Scholar
Enteric glial cell network function is required for epithelial barrier restitution following intestinal ischemic injury in the early postnatal period
A. Ziegler, Madison L. Caldwell, Sara J. Erwin, Emily A. Hellstrom +7 more
2023American Journal of Physiology - Gastrointestinal and Liver Physiology6 citations Open access
Semantic Scholar
Hypoxia Primes Human ISCs for Interleukin-Dependent Rescue of Stem Cell Activity
Kristina R. Rivera, R. Bliton, Joseph Burclaff, Michael J. Czerwinski +12 more
2023Cellular and Molecular Gastroenterology and Hepatology6 citations Open access
Semantic Scholar
Quantitative Analysis of Intestinal Stem Cell Dynamics Using Microfabricated Cell Culture Arrays.
L. Samsa, Ian A. Williamson, S. Magness
2018Methods in molecular biology6 citations
Semantic Scholar
An in vitro platform for quantifying cell cycle phase lengths in primary human intestinal epithelial cells
Michael J. Cotton, Pablo Ariel, Kaiwen Chen, Vanessa A. Walcott +8 more
2024Scientific Reports5 citations Open access
Semantic Scholar
Culturing homogeneous microtissues at scale
R. Bliton, S. Magness
2020Nature Biomedical Engineering5 citations
Semantic Scholar
Lumen and mucosa-associated Lactobacillus rhamnosus from the intestinal tract of organ donors
A. Marsh, Al-Mounawara A. Yaya, Sandy Y. M. Ng, K. Chandrashekhar +3 more
2020Gut Microbiome4 citations Open access
Semantic Scholar

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