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N. Kotlov · SciRah

Researcher profile · Semantic Scholar

N. Kotlov

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N. Kotlov — researcher profile on SciRah

h-index: 17
Works: 125
Citations: 3,157

Most-cited papers

Clinical and biological subtypes of B-cell lymphoma revealed by microenvironmental signatures.
N. Kotlov, A. Bagaev, M. Revuelta, J. Phillip +17 more
2021Cancer Discovery206 citations Open access
Semantic Scholar
Precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes.
Aleksandr Zaitsev, Maksim Chelushkin, Daniiar Dyikanov, Ilya Cheremushkin +33 more
2022Cancer Cell116 citations Open access
Semantic Scholar
Follicular Lymphoma Microenvironment Characteristics Associated with Tumor Cell Mutations and MHC Class II Expression
Guang-Chun Han, Q. Deng, M. Marques-Piubelli, En-Yu Dai +30 more
2022Blood Cancer Discovery79 citations Open access
Semantic Scholar
Tadalafil enhances immune signatures in response to neoadjuvant nivolumab in resectable head and neck squamous cell carcinoma
A. Luginbuhl, J. Johnson, L. Harshyne, A. Linnenbach +24 more
2021Clinical Cancer Research53 citations Open access
Semantic Scholar
Duvelisib plus Romidepsin in relapsed/refractory T cell lymphomas: a phase 1b/2a trial
S. Horwitz, A. J. Nirmal, Jahan Rahman, Ran Xu +38 more
2024Nature Medicine51 citations Open access
Semantic Scholar
Multi-omic profiling of follicular lymphoma reveals changes in tissue architecture and enhanced stromal remodeling in high-risk patients
Andrea J. Radtke, E. Postovalova, Arina Varlamova, A. Bagaev +37 more
2024Cancer Cell48 citations Open access
Semantic Scholar
The Breast Cancer Classifier refines molecular breast cancer classification to delineate the HER2-low subtype
P. Turova, V. Kushnarev, O. Baranov, A. Butusova +10 more
2025npj Breast Cancer42 citations Open access
Semantic Scholar
Multicenter Phase 2 Study of Oral azacitidine (CC-486) plus CHOP as initial treatment for peripheral T-cell lymphoma.
J. Ruan, A. Moskowitz, N. Mehta-Shah, L. Sokol +20 more
2023Blood38 citations Open access
Semantic Scholar
Integrative genomic analysis of DLBCL identifies immune environments associated with bispecific antibody response
Sravya Tumuluru, James K. Godfrey, Alan Cooper, Jovian Yu +20 more
2025Blood31 citations Open access
Semantic Scholar
XPO1 Enables Adaptive Regulation of mRNA Export Required for Genotoxic Stress Tolerance in Cancer Cells
R. Marullo, S. Rutherford, M. Revuelta, N. Zamponi +18 more
2023Cancer Research26 citations Open access
Semantic Scholar
Procrustes is a machine-learning approach that removes cross-platform batch effects from clinical RNA sequencing data
N. Kotlov, Kirill Shaposhnikov, Cagdas Tazearslan, M. Chasse +21 more
2024Communications Biology17 citations Open access
Semantic Scholar
Immune-depleted tumor microenvironment is associated with poor outcomes and BTK inhibitor resistance in mantle cell lymphoma
P. Jain, K. Nomie, N. Kotlov, VitaIy Segodin +9 more
2023Blood Cancer Journal16 citations Open access
Semantic Scholar
Analysis of 20 Independently Performed Assays to Measure Homologous Recombination Deficiency (HRD) in Ovarian Cancer: Findings From the Friends' HRD Harmonization Project
H. Andrews, L. McShane, Elise C. Kohn, R. Arend +33 more
2024JCO Oncology Advances13 citations Open access
Semantic Scholar
A patient-derived T cell lymphoma biorepository uncovers pathogenetic mechanisms and host-related therapeutic vulnerabilities
D. Fiore, L. Cappelli, Zhao-Qi Liu, N. Kotlov +73 more
2025Cell Reports Medicine11 citations Open access
Semantic Scholar
A CD5 Gene Signature Identifies Diffuse Large B-Cell Lymphomas Sensitive to Brutonʼs Tyrosine Kinase Inhibition
Alan Cooper, Sravya Tumuluru, Kyle Kissick, G. Venkataraman +13 more
2023Blood11 citations Open access
Semantic Scholar
IL-8 correlates with non-response to neoadjuvant nivolumab in HPV positive HNSCC via a potential extracellular vesicle miR-146a mediated mechanism
Brianna L Hill, Alyssa N Calder, J. Flemming, Yi-Yang Guo +21 more
2023Molecular Carcinogenesis11 citations Open access
Semantic Scholar
A Multi-scale, Multiomic Atlas of Human Normal and Follicular Lymphoma Lymph Nodes
Andrea J. Radtke, E. Postovalova, Arina Varlamova, A. Bagaev +34 more
2022bioRxiv9 citations Open access
Semantic Scholar
B-Cell Infiltrate in the Tumor Microenvironment Is Associated With Improved Survival in Resected Lung Adenocarcinoma
I. Dagogo-Jack, Ivan Valiev, N. Kotlov, Anna Belozerova +13 more
2023JTO Clinical and Research Reports7 citations Open access
Semantic Scholar
CD5 Gene Signature Identifies Diffuse Large B-Cell Lymphomas Sensitive to Brutonʼs Tyrosine Kinase Inhibition
Alan Cooper, Sravya Tumuluru, Kyle Kissick, G. Venkataraman +13 more
2023Journal of Clinical Oncology7 citations
Semantic Scholar
B cell‐dependent subtypes and treatment‐based immune correlates to survival in stage 3 and 4 lung adenocarcinomas
Susan Raju Paul, Ivan Valiev, S. Korek, V. Zyrin +28 more
2023FASEB bioAdvances5 citations Open access
Semantic Scholar
Transcriptomic Profiling and Tumor Microenvironment Classification Reveal Unique and Dynamic Immune Biology in HIV-Associated Kaposi Sarcoma
Jihua Yang, A. E. Cali Daylan, A.E. Shevkoplias, E. Postovalova +12 more
2025Cells4 citations Open access
Semantic Scholar
Author Correction: Duvelisib plus romidepsin in relapsed/refractory T cell lymphomas: a phase 1b/2a trial
Steven M. Horwitz, A. J. Nirmal, Jahan Rahman, Ran Xu +38 more
2024Nature Medicine4 citations Open access
Semantic Scholar
Deciphering the origin and therapeutic targets of cancer of unknown primary: a case report that illustrates the power of integrative whole-exome and transcriptome sequencing analysis
M. Al Assaad, Shin Nara, M. Sigouros, J. Manohar +18 more
2024Frontiers in Oncology3 citations Open access
Semantic Scholar
Viral Transcript and Tumor Immune Microenvironment-Based Transcriptomic Profiling of HPV-Associated Head and Neck Squamous Cell Carcinoma Identifies Subtypes Associated with Prognosis
Anastasiia Nikitina, Daria Kiriy, A. Tyshevich, Dmitry Tychinin +11 more
2024medRxiv3 citations Open access
Semantic Scholar
Phase 2 Study of Acalabrutinib Window Prior to Frontline Therapy in Untreated Aggressive B-Cell Lymphoma: Preliminary Results and Correlatives of Response to Acalabrutinib
M. Roschewski, J. Phelan, S. Pittaluga, C. Melani +24 more
2021Blood3 citations Open access
Semantic Scholar
Uncovering the tumor microenvironment (TME): Exploring survival and immunotherapy (IO) response in cancer of unknown primary (CUP).
Joelle Allam, Jeannelyn Estrella, V. Higbie, Phat H Le +15 more
2025Journal of Clinical Oncology2 citations Open access
Semantic Scholar
The multiomic tumor microenvironment landscape of invasive lobular carcinoma of the breast.
J. Mouabbi, F. Meric-Bernstam, Azadeh Nasrazadani, B. Nelson +16 more
2024Journal of Clinical Oncology2 citations Open access
Semantic Scholar
Integrative genomic analysis identifies unique immune environments associated with immunotherapy response in diffuse large B cell lymphoma
Sravya Tumuluru, James K. Godfrey, Alan Cooper, Jovian Yu +18 more
2024bioRxiv2 citations Open access
Semantic Scholar
Abstract A017: An analysis of 13 independently performed assays to measure homologous recombination deficiency using 90 freshly extracted high grade serous ovarian tumors: findings from the friends of cancer research hrd harmonization project
Hillary Stires, L. McShane, R. Arend, Alyssa Chapman +19 more
2024Cancer Research2 citations
Semantic Scholar
Association of Circulating T Cell and Tumor Microenvironment Profiles with Immune Checkpoint Blockade Outcome in Sarcoma
E. Rosenbaum, Fiona D. Ehrich, M. Yosofvand, M. Bradic +29 more
2026Clinical Cancer Research1 citations Open access
Semantic Scholar
Examining the tumor microbiology and microenvironment of patients with triple-negative inflammatory breast cancer receiving KEYNOTE-522.
A. Nasrazadani, B. Lim, A. Alexander, B. Debeb +15 more
2026Journal of Clinical Oncology1 citations
Semantic Scholar
Machine learning-based single-sample molecular classifier for cancer grading
Zoia Antysheva, N. Kotlov, Mariia V. Guryleva, Ivan Valiev +6 more
2025Frontiers in Oncology1 citations Open access
Semantic Scholar
Mutational and copy number analysis at diagnosis and relapse of mantle cell lymphoma
E. Joffe, Manik Uppal, Serena Zheng, K. Bantilan +22 more
2025Haematologica1 citations Open access
Semantic Scholar
Detecting hotspots of intra- and transchromosomal fusions in liposarcomas by RNA sequencing.
Dmitrii Grachev, Danil Ivanov, O. Baranov, V. Kushnarev +9 more
2025Journal of Clinical Oncology1 citations Open access
Semantic Scholar
Molecular subtyping and insights into sarcoma biology and prognosis.
A.E. Shevkoplias, Angelina Khachatryan, V. Kushnarev, Konstantin Chernyshov +3 more
2025Journal of Clinical Oncology1 citations Open access
Semantic Scholar
Circulating Tumor DNA Predicts Time to First Treatment in Previously Untreated Follicular Lymphoma: Analysis from a Prospective Clonal Evolution Study
R. Lakhotia, Stefania Pittaluga, James D. Phelan, Allison I Graeter +31 more
2024Blood1 citations
Semantic Scholar
Machine Learning-Based Approach to Improve Classification and Diagnostics of Peripheral T-Cell Lymphomas
Anastasia Sobol, Stepan Kuznetsov, Anton Kremlev, G. Inghirami +3 more
2024Blood1 citations
Semantic Scholar
Transcriptomic analysis of novel tumor suppressor gene fusions in bone sarcomas.
Dmitrii Grachev, Danil Ivanov, V. Kushnarev, S. Yong +7 more
2024Journal of Clinical Oncology1 citations Open access
Semantic Scholar
Aggregated analysis of 1,000 patients with cancer to assess the benefits of integrated whole exome and whole transcriptome sequencing.
Konstantin Chernyshov, A. Love, V. Senichkin, G. Sagaradze +7 more
2023Journal of Clinical Oncology1 citations Open access
Semantic Scholar
Differential genomic and transcriptomic analysis of invasive lobular and ductal carcinomas.
J. Mouabbi, F. Meric-Bernstam, S. Khorkova, P. Turova +8 more
2023Journal of Clinical Oncology1 citations Open access
Semantic Scholar
Genomic characterization of the GATA3 mutational landscape in breast cancer.
J. Mouabbi, F. Meric-Bernstam, P. Turova, Konstantin Chernyshov +8 more
2023Journal of Clinical Oncology1 citations Open access
Semantic Scholar
Tumor immunity portrait: An AI-driven molecular predictor combining tumor microenvironment and tumor mutational burden for immune checkpoint inhibitor response prediction.
P. Shilo, A. Tarasov, A. Filatova, K. Danilov +6 more
2023Journal of Clinical Oncology1 citations Open access
Semantic Scholar
Test-the-Test: Clinical Utility of Comprehensive Whole Exome Sequencing and RNA-Seq for Patients with Lymphoma
D. Chihara, Kumudha Balakrishnan, G. Masand, A. Novokreshchenova +10 more
2023Blood1 citations Open access
Semantic Scholar
Abstract 5172: B cell content in the tumor microenvironment is associated with improved survival in stage II lung adenocarcinoma
Ivan Valiev, N. Kotlov, Anna Belozerova, A. Lopareva +10 more
2022Cancer Research1 citations
Semantic Scholar
Correlative Biomarkers for CART19 Response in Patients with Relapsed or Refractory Diffuse Large B-Cell Lymphoma
C. Batlevi, Grigorii Nos, N. Kotlov, M. Sorokina +20 more
2022Blood1 citations Open access
Semantic Scholar
Abstract 1227: Molecular-based tumor grade predictor for breast cancer, clear cell renal cell carcinoma, and lung adenocarcinoma
Zoya Antysheva, M. V. Guryleva, Ivan Valiev, N. Kotlov +10 more
2022Cancer Research1 citations
Semantic Scholar
Abstract 3877: Integrative application of Lymphly reveals shared molecular landscape across B-cell lymphomas.
Dmitrii Snitkin, Pavel Zemskiy, Andrey Suponin, Mark Meerson +5 more
2026Cancer Research0 citations
Semantic Scholar
Immunotherapy Response and Survival Outcome by Immunophenotypic Signature in Non-Small Cell Lung Cancer.
Dhruv Bansal, B. Ponvilawan, Dmitrii Grachev, V. Kushnarev +10 more
2026JCO Precision Oncology0 citations
Semantic Scholar
Abstract 5251: Precise description of metabolomic states using NGS uncover new potential biomarkers of response to TKIs in ccRCC
Алина Андреевна Тарасова, S. Kurpe, Andrey Kravets, N. Kotlov
2026Cancer Research0 citations
Semantic Scholar
POSTER: MM-442: An Actionability Score for BCMA-, GPRC5D-, and CD38-Targeted Therapy Selection in Multiple Myeloma
Konstantin Chernyshov, S. Kurpe, M.D. Kuzmicheva, Kseniia Fede +10 more
2026Clinical Lymphoma, Myeloma & Leukemia0 citations
Semantic Scholar

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