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M. Pfannkuchen · SciRah

Researcher profile · Semantic Scholar

M. Pfannkuchen

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M. Pfannkuchen — researcher profile on SciRah

h-index: 24
Works: 104
Citations: 2,265

Most-cited papers

DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
H. Weigand, A. Beermann, F. Čiampor, F. Costa +37 more
2019bioRxiv501 citations Open access
Semantic Scholar
Mutual protection of ribosomal proteins L5 and L11 from degradation is essential for p53 activation upon ribosomal biogenesis stress
Slađana Bursać, Maja Cokarić Brdovčak, M. Pfannkuchen, Ines Oršolić +10 more
2012Proceedings of the National Academy of Sciences of the United States of America217 citations Open access
Semantic Scholar
DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe
F. Leese, F. Altermatt, A. Bouchez, T. Ekrem +97 more
2016179 citations Open access
Semantic Scholar
Diat.barcode, an open-access curated barcode library for diatoms
F. Rimet, E. Gusev, M. Kahlert, M. Kelly +8 more
2019Scientific Reports145 citations Open access
Semantic Scholar
Oxygen dynamics and transport in the Mediterranean sponge Aplysina aerophoba
Friederike Hoffmann, H. Røy, K. Bayer, U. Hentschel +3 more
2008Marine Biology97 citations Open access
Semantic Scholar
Light inside sponges
F. Brümmer, M. Pfannkuchen, Alexander G Baltz, T. Hauser +1 more
200879 citations
Semantic Scholar
Diatom DNA metabarcoding for ecological assessment: Comparison among bioinformatics pipelines used in six European countries reveals the need for standardization.
Bonnie Bailet, L. Apothéloz-Perret-Gentil, A. Baričević, T. Chonova +10 more
2020Science of the Total Environment74 citations Open access
Semantic Scholar
Toxin-producing Ostreopsis cf. ovata are likely to bloom undetected along coastal areas.
M. Pfannkuchen, J. Godrijan, D. Pfannkuchen, L. Iveša +8 more
2012Environmental Science and Technology66 citations
Semantic Scholar
Seasonal phytoplankton dynamics in the coastal waters of the north-eastern Adriatic Sea
J. Godrijan, D. Marić, I. Tomaz̆ić, R. Precali +1 more
201361 citations Open access
Semantic Scholar
AFM imaging of extracellular polymer release by marine diatom Cylindrotheca closterium (Ehrenberg) Reiman & J.C. Lewin
G. Pletikapić, T. Radić, Amela Hozić Zimmermann, V. Svetlic̆ić +4 more
2011Journal of Molecular Recognition50 citations
Semantic Scholar
Coastal zones as important habitats of coccolithophores: A study of species diversity, succession, and life‐cycle phases
J. Godrijan, J. Young, Daniela Marić Pfannkuchen, R. Precali +1 more
201847 citations Open access
Semantic Scholar
Alkaline phosphatase activity related to phosphorus stress of microphytoplankton in different trophic conditions
Ingrid Ivančić, M. Pfannkuchen, J. Godrijan, T. Djakovac +4 more
201646 citations Open access
Semantic Scholar
Survival mechanisms of phytoplankton in conditions of stratification‐induced deprivation of orthophosphate: Northern Adriatic case study
Ingrid Ivancčić, J. Godrijan, M. Pfannkuchen, D. Marić +3 more
201240 citations
Semantic Scholar
Food of tardigrades: a case study to understand food choice, intake and digestion
R. Schill, K. Jönsson, M. Pfannkuchen, F. Brümmer
201135 citations Open access
Semantic Scholar
"Candidatus Paraholospora nucleivisitans", an intracellular bacterium in Paramecium sexaurelia shuttles between the cytoplasm and the nucleus of its host.
E. Eschbach, M. Pfannkuchen, M. Schweikert, Denja Drutschmann +4 more
2009Systematic and Applied Microbiology34 citations
Semantic Scholar
Craspedacusta sowerbii, Lankester 1880 – population dispersal analysis using COI and ITS sequences
G. Fritz, M. Pfannkuchen, Andy Reuner, R. Schill +1 more
200933 citations Open access
Semantic Scholar
The Ecology of One Cosmopolitan, One Newly Introduced and One Occasionally Advected Species from the Genus Skeletonema in a Highly Structured Ecosystem, the Northern Adriatic
Daniela Marić Pfannkuchen, J. Godrijan, Mirta Smodlaka Tanković, A. Baričević +5 more
2017Microbial Ecology32 citations
Semantic Scholar
Ex situcultivation ofAplysinaaerophobaclose toin situconditions: ecological, biochemical and histological aspects
Anne Klöppel, M. Pfannkuchen, A. Putz, P. Proksch +1 more
200832 citations
Semantic Scholar
Colonization of diatoms and bacteria on artificial substrates in the northeastern coastal Adriatic Sea
Maja Mejdandžić, T. Ivankovic, M. Pfannkuchen, J. Godrijan +3 more
201531 citations Open access
Semantic Scholar
Assessment of bacterial endosymbiont diversity in Otiorhynchus spp. (Coleoptera: Curculionidae) larvae using a multitag 454 pyrosequencing approach
J. Hirsch, Stephan Strohmeier, M. Pfannkuchen, A. Reineke
2012BMC Microbiology30 citations Open access
Semantic Scholar
In situ pumping activity of the sponge Aplysina aerophoba, Nardo 1886
M. Pfannkuchen, G. Fritz, Sabine Schlesinger, K. Bayer +1 more
200929 citations
Semantic Scholar
Development of periphytic diatoms on different artificial substrates in the Eastern Adriatic Sea
T. Nenadovic, Tena Šarčević, Hrvoje Čižmek, J. Godrijan +3 more
201528 citations Open access
Semantic Scholar
Diversity, occurrence, and habitats of the diatom genus Bacteriastrum (Bacillariophyta) in the northern Adriatic Sea, with the description of B. jadranum sp. nov.
J. Godrijan, D. Marić, Mirna Imešek, I. Janeković +2 more
201221 citations
Semantic Scholar
Seasonal variations in extracellular enzymatic activity in marine snow-associated microbial communities and their impact on the surrounding water.
Ingrid Ivančić, P. Paliaga, M. Pfannkuchen, T. Djakovac +7 more
2018FEMS Microbiology Ecology19 citations Open access
Semantic Scholar
Insights into the life strategy of the common marine diatom Chaetoceros peruvianus Brightwell
Mirta Smodlaka Tanković, A. Baričević, Ingrid Ivančić, Nataša Kužat +6 more
2018PLoS ONE18 citations Open access
Semantic Scholar
Diat.barcode, an open-access barcode library for diatoms
F. Rimet, T. Chonova, Gilles Gassiole, E. Gusev +12 more
202017 citations
Semantic Scholar
Proficiency testing and cross-laboratory method comparison to support standardisation of diatom DNA metabarcoding for freshwater biomonitoring
V. Vasselon, S. F. Rivera, Éva Ács, S. Almeida +37 more
2025Metabarcoding and Metagenomics16 citations Open access
Semantic Scholar
Successful acclimation of marine diatoms Chaetoceros curvisetus/pseudocurvisetus to climate change
I. Vrana, B. Gašparović, S. Geček, J. Godrijan +6 more
2023Limnology and Oceanography15 citations Open access
Semantic Scholar
Recommendations for the preservation of environmental samples in diatom metabarcoding studies
A. Baričević, C. Chardon, M. Kahlert, S. Karjalainen +8 more
202214 citations
Semantic Scholar
Marine plastic debris in the north-eastern Adriatic
Mirta Smodlaka Tanković, Victor Godrijan Jelena Stinga Perusco, D. Pfannkuchen, M. Pfannkuchen
201713 citations
Semantic Scholar
Microscopical techniques reveal the in situ microbial association inside Aplysina aerophoba, Nardo 1886 (Porifera, Demospongiae, Verongida) almost exclusively consists of cyanobacteria
M. Pfannkuchen, Sabine Schlesinger, A. Fels, F. Brümmer
201013 citations
Semantic Scholar
Multigene phylogeny and morphology of newly isolated strain of Pseudo-nitzschia mannii Amato & Montresor (Adriatic Sea)
Dorotea Grbin, M. Pfannkuchen, I. Babić, Maja Mejdandžić +6 more
201712 citations
Semantic Scholar
Integrative taxonomy of four Clathrina species of the Adriatic Sea, with the first formal description of Clathrina rubra Sarà, 1958
Mirna Imešek, B. Plese, M. Pfannkuchen, J. Godrijan +3 more
2013Organisms Diversity & Evolution12 citations
Semantic Scholar
Characterisation and toxicological activity of three different Pseudo-nitzschia species from the northern Adriatic Sea (Croatia).
Mirta Smodlaka Tanković, A. Baričević, Marko Gerić, A. Domijan +10 more
2022Environmental Research11 citations Open access
Semantic Scholar
Depth-Related Alkaloid Variation in Mediterranean Aplysina Sponges
A. Putz, Anne Kloeppel, M. Pfannkuchen, F. Brümmer +1 more
2009Zeitschrift für Naturforschung C - A Journal of Biosciences11 citations Open access
Semantic Scholar
Mytilus galloprovincialis (Lamarck, 1819) as host of Mytilicola orientalis (Mori, 1935) in the northern Adriatic Sea: presence and effect
I. Kovačić, D. Pavičić-Hamer, M. Pfannkuchen, Matteo Usich
2016Aquaculture International10 citations
Semantic Scholar
Heterologous expression of DsRed2 in young sponges (Porifera).
M. Pfannkuchen, F. Brümmer
2009International Journal of Developmental Biology10 citations Open access
Semantic Scholar
Morpho-physiological adaptations of Leptocylindrus aporus and L. hargravesii to phosphate limitation in the northern Adriatic
Nataša Kužat, Daniela Marić Pfannkuchen, Mirta Smodlaka Tanković, A. Baričević +4 more
2022Scientific Reports9 citations Open access
Semantic Scholar
The Fellowship of the Ring Test: DNAqua-Net WG2 initiative to compare diatom metabarcoding protocols used in routine freshwater biomonitoring for standardisation
V. Vasselon, É. Ács, S. Almeida, K. Andree +38 more
20219 citations Open access
Semantic Scholar
Coastal Eukaryotic Plankton Diversity of the Southern Adriatic as Revealed by Metabarcoding
A. Baričević, T. Kogovsek, Mirta Smodlaka Tankovic, Lana Grižančić +6 more
2024Diversity8 citations Open access
Semantic Scholar
A metabarcode based (species) inventory of the northern Adriatic phytoplankton
Lana Grižančić, A. Baričević, Mirta Smodlaka Tanković, Ivan Vlašiček +5 more
2023Biodiversity Data Journal7 citations Open access
Semantic Scholar
Experimental evidence for shaping and bloom inducing effects of decapod larvae of Xantho poressa (Olivi, 1792) on marine phytoplankton
Mirta Smodlaka Tanković, A. Baričević, Victor Stinga Perusco, R. Melzer +6 more
2018Journal of the Marine Biological Association of the United Kingdom7 citations
Semantic Scholar
Sponges (Porifera) and eukaryotic, unicellular plankton: A case study on Aplysina aerophoba, Nardo 1886 in the Northern Adriatic
M. Pfannkuchen, D. Marić, J. Godrijan, G. Fritz +4 more
20097 citations
Semantic Scholar
Cluster analysis of long-term phytoplankton data from the Northern Adriatic reveals environmental influences and disruptions in seasonal patterns
Ivan Vlašiček, Daniela Marić Pfannkuchen, Mirta Smodlaka Tanković, A. Baričević +6 more
2025Frontiers in Ecology and Evolution5 citations Open access
Semantic Scholar
First regional reference database of northern Adriatic diatom transcriptomes
Mia Knjaz, A. Baričević, Mirta Smodlaka Tanković, Nataša Kužat +6 more
2024Scientific Reports4 citations Open access
Semantic Scholar
Identification of the heterotrophic nanoflagellate Bilabrum latius in the southern Adriatic (Mediterranean Sea).
A. Baričević, Daniela Maric Pfannkuchen, Mirta Smodlaka Tankovic, Mia Knjaz +4 more
2023European Journal of Protistology4 citations
Semantic Scholar
Abiotic Sponge Ecology Conditions, Limski Kanal and Northern Adriatic Sea, Croatia
Anne Klöppel, Corinna Messal, M. Pfannkuchen, J. Matschullat +3 more
20114 citations Open access
Semantic Scholar
Depth profile of Aplysina ssp.: morphological, histological and biochemical aspects and their role in species distinction
Anne Klöppel, A. Putz, M. Pfannkuchen, G. Fritz +3 more
2009Marine Biodiversity4 citations
Semantic Scholar
Assigning taxonomy and traits to DNA sequences of river diatoms in a region with limited taxonomic knowledge using the updated and annotated reference library Diat.barcode
M. M. Nicolosi Gelis, Raphaëlle Barry-Martinet, J. Briand, T. Chonova +18 more
2025International Journal of Limnology3 citations Open access
Semantic Scholar
High-frequency observations during Adriatic mucilage event reveal unique phytoplankton traits and diversity response
Ivan Vlašiček, D. Pfannkuchen, Mirta Smodlaka Tanković, A. Baričević +10 more
2025Scientific Reports3 citations Open access
Semantic Scholar

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A. Baričević — researcher profile on SciRah
J. Godrijan×14
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D. Pfannkuchen×13
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F. Brümmer×13
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Nataša Kužat — researcher profile on SciRah

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