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Manik Kuchroo · SciRah

Researcher profile · Semantic Scholar

Manik Kuchroo

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Manik Kuchroo — researcher profile on SciRah

h-index: 12
Works: 28
Citations: 1,165

Most-cited papers

A reservoir of stem-like CD8+ T cells in the tumor-draining lymph node preserves the ongoing anti-tumor immune response
K. Connolly, Manik Kuchroo, Aarthi Venkat, Achia Khatun +18 more
2021Science immunology361 citations Open access
Semantic Scholar
A forward chemical genetic screen reveals gut microbiota metabolites that modulate host physiology
Haiwei Chen, Phu-Khat Nwe, Yi Yang, C. Rosen +7 more
2019Cell314 citations Open access
Semantic Scholar
Manifold Interpolating Optimal-Transport Flows for Trajectory Inference
G. Huguet, D. S. Magruder, Oluwadamilola Fasina, Alexander Tong +3 more
2022Neural Information Processing Systems131 citations Open access
Semantic Scholar
Multiscale PHATE identifies multimodal signatures of COVID-19
Manik Kuchroo, Je-Chun Huang, P. Wong, J. Grenier +103 more
2022Nature Biotechnology73 citations Open access
Semantic Scholar
Single-cell analysis reveals inflammatory interactions driving macular degeneration
Manik Kuchroo, Marcello DiStasio, E. Song, Eda Calapkulu +21 more
2023Nature Communications60 citations Open access
Semantic Scholar
Immune cells and their inflammatory mediators modify β cells and cause checkpoint inhibitor–induced diabetes
A. Perdigoto, Songyan Deng, K. Du, Manik Kuchroo +16 more
2022JCI Insight54 citations Open access
Semantic Scholar
Diffusion Earth Mover's Distance and Distribution Embeddings
Alexander Tong, G. Huguet, A. Natik, Kincaid MacDonald +4 more
2021International Conference on Machine Learning39 citations
Semantic Scholar
Coarse Graining of Data via Inhomogeneous Diffusion Condensation
Nathan Brugnone, Alex Gonopolskiy, Mark W. Moyle, Manik Kuchroo +6 more
20192019 IEEE International Conference on Big Data (Big Data)24 citations Open access
Semantic Scholar
Multiscale PHATE Exploration of SARS-CoV-2 Data Reveals Multimodal Signatures of Disease
Manik Kuchroo, Jessie Huang, P. Wong, J. Grenier +24 more
2020bioRxiv18 citations Open access
Semantic Scholar
Structural and developmental principles of neuropil assembly in C. elegans
Mark W. Moyle, Kristopher M. Barnes, Manik Kuchroo, Alex Gonopolskiy +15 more
2020Nature16 citations Open access
Semantic Scholar
MULTIMODAL DATA VISUALIZATION AND DENOISING WITH INTEGRATED DIFFUSION
Manik Kuchroo, Abhinav Godavarthi, Alexander Tong, Guy Wolf +1 more
2021International Workshop on Machine Learning for Signal Processing15 citations Open access
Semantic Scholar
A reservoir of stem-like CD8 T cells in the tumor-draining lymph node maintains the ongoing anti-tumor immune response
K. Connolly, Manik Kuchroo, Aarthi Venkat, Achia Khatun +17 more
2020bioRxiv13 citations Open access
Semantic Scholar
linc-mipep and linc-wrb encode micropeptides that regulate chromatin accessibility in vertebrate-specific neural cells
V. Tornini, Li-Yun Miao, Ho-Joon Lee, T. Gerson +11 more
2022bioRxiv12 citations Open access
Semantic Scholar
Revealing dynamic temporal trajectories and underlying regulatory networks with Cflows
Alexander Tong, Manik Kuchroo, Shabarni Gupta, Aarthi Venkat +7 more
2025bioRxiv10 citations Open access
Semantic Scholar
EMBEDDING SIGNALS ON GRAPHS WITH UNBALANCED DIFFUSION EARTH MOVER’S DISTANCE
Alexander Tong, G. Huguet, D. Shung, A. Natik +4 more
2021IEEE International Conference on Acoustics, Speech, and Signal Processing10 citations Open access
Semantic Scholar
Time-inhomogeneous diffusion geometry and topology
G. Huguet, Alexander Tong, Bastian Alexander Rieck, Je-Chun Huang +4 more
2022SIAM Journal on Mathematics of Data Science6 citations Open access
Semantic Scholar
Multimodal data visualization, denoising and clustering with integrated diffusion
Manik Kuchroo, Abhinav Godavarthi, Guy Wolf, Smita Krishnaswamy
2021arXiv.org6 citations
Semantic Scholar
spARC recovers human glioma spatial signaling networks with graph filtering
Manik Kuchroo, D. Miyagishima, H. Steach, Abhinav Godavarthi +10 more
2022bioRxiv5 citations Open access
Semantic Scholar
Topological analysis of single-cell data reveals shared glial landscape of macular degeneration and neurodegenerative diseases
Manik Kuchroo, M. DiStasio, Eda Calapkulu, M. Ige +11 more
2021bioRxiv5 citations Open access
Semantic Scholar
NeuroSC: Exploring Neurodevelopment via Spatiotemporal Collation of Anatomical Networks
Noelle L. Koonce, Sarah E. Emerson, Dhananjay Bhaskar, Manik Kuchroo +7 more
2024bioRxiv2 citations Open access
Semantic Scholar
Embedding Signals on Knowledge Graphs with Unbalanced Diffusion Earth Mover's Distance
Alexander Tong, Guillaume Huguet, D. Shung, Amine Natik +4 more
2021arXiv.org2 citations
Semantic Scholar
Abstract 5483: Revealing dynamic temporal trajectories and underlying regulatory networks with Cflows.
Shabarni Gupta, Xing-Zhi Sun, Alexander Tong, Manik Kuchroo +9 more
2026Cancer Research0 citations
Semantic Scholar
in vivo CRISPR screen identifies novel regulators of microglia state in Alzheimer’s disease 9094
Manik Kuchroo, Neta Rosenzweig, B. Starr, Isabel Valenbreder +4 more
2025Journal of Immunology0 citations
Semantic Scholar
Exploring neurodevelopment via spatiotemporal collation of anatomical networks with NeuroSC
Noelle L. Koonce, Sarah E. Emerson, Dhananjay Bhaskar, Manik Kuchroo +7 more
2025eLife0 citations Open access
Semantic Scholar
157 Identifying Spatial Transcriptomics Signaling Networks in Human Glioblastoma Using Graph-Based Machine Learning
D. Miyagishima, Manik Kuchroo, H. Steach, Du H. Phan +10 more
2023Neurosurgery0 citations
Semantic Scholar
A Phase 2 Study of Lenalidomide in Combination with Mitoxantrone, Etoposide, and Cytarabine (Len plus MEC) in Patients with Relapsed or Refractory Acute Myeloid Leukemia
Manik Kuchroo, R. Redd, Jacqueline S. Garcia, M. Keng +15 more
2023Blood0 citations Open access
Semantic Scholar
Multigranular single-cell analysis reveals inflammatory interactions driving
Manik Kuchroo, Marcello DiStasio, E. Song, Eda Calapkulu +21 more
20220 citations
Semantic Scholar
Topological Analysis of Single-Cell Hierarchy Reveals Inflammatory Glial Landscape of Macular Degeneration
Manik Kuchroo, Marcello DiStasio, E. Song, Eda Calapkulu +19 more
2021Social Science Research Network0 citations
Semantic Scholar

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