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Alexander S. Kirpich · SciRah

Researcher profile · Semantic Scholar

Alexander S. Kirpich

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Alexander S. Kirpich — researcher profile on SciRah

h-index: 13
Works: 43
Citations: 1,364

Most-cited papers

Real-time forecasts of the COVID-19 epidemic in China from February 5th to February 24th, 2020
K. Roosa, Yiseul Lee, R. Luo, Alexander S. Kirpich +4 more
2020Infectious Disease Modelling650 citations Open access
Semantic Scholar
Short-term Forecasts of the COVID-19 Epidemic in Guangdong and Zhejiang, China: February 13–23, 2020
K. Roosa, Yiseul Lee, R. Luo, Alexander S. Kirpich +4 more
2020Journal of Clinical Medicine226 citations Open access
Semantic Scholar
Variable selection in omics data: A practical evaluation of small sample sizes
Alexander S. Kirpich, E. Ainsworth, Jessica M. Wedow, Jeremy R. B. Newman +2 more
2018PLoS ONE67 citations Open access
Semantic Scholar
Colonization Dynamics of Cefotaxime Resistant Bacteria in Beef Cattle Raised Without Cephalosporin Antibiotics
R. Mir, Thomas A. Weppelmann, Lin Teng, Alexander S. Kirpich +3 more
2018Frontiers in Microbiology40 citations Open access
Semantic Scholar
Bone mineral density in glycogen storage disease type Ia and Ib
L. Minarich, Alexander S. Kirpich, Laurie M. Fiske, D. A. Weinstein
2012Genetics in Medicine40 citations Open access
Semantic Scholar
SECIMTools: a suite of metabolomics data analysis tools
Alexander S. Kirpich, Miguel Ibarra, O. Moskalenko, J. Fear +5 more
2018BMC Bioinformatics37 citations Open access
Semantic Scholar
Cholera Transmission in Ouest Department of Haiti: Dynamic Modeling and the Future of the Epidemic
Alexander S. Kirpich, Thomas A. Weppelmann, Yang Yang, Afsar Ali +2 more
2015PLoS Neglected Tropical Diseases35 citations Open access
Semantic Scholar
Automatic scoring of COVID-19 severity in X-ray imaging based on a novel deep learning workflow
V. Danilov, D. Litmanovich, A. Proutski, Alexander S. Kirpich +3 more
2022Scientific Reports34 citations Open access
Semantic Scholar
Global transmission network of SARS-CoV-2: from outbreak to pandemic
P. Skums, Alexander S. Kirpich, P. Baykal, A. Zelikovsky +1 more
2020medRxiv30 citations Open access
Semantic Scholar
Excess mortality in Belarus during the COVID-19 pandemic as the case study of a country with limited non-pharmaceutical interventions and limited reporting
Alexander S. Kirpich, Aleksandr Shishkin, Thomas A. Weppelmann, Alexander Perez Tchernov +2 more
2022Scientific Reports22 citations Open access
Semantic Scholar
An investigation of spatial-temporal patterns and predictions of the coronavirus 2019 pandemic in Colombia, 2020–2021
A. Tariq, T. Chakhaia, Sushma Dahal, Alexander C. Ewing +15 more
2022PLoS Neglected Tropical Diseases14 citations Open access
Semantic Scholar
Real-time forecasts of the 2019-nCoV epidemic in China from February 5th to February 24th, 2020
K. Roosa, Yiseul Lee, R. Luo, Alexander S. Kirpich +4 more
202014 citations
Semantic Scholar
Evaluating the forecasting performance of ensemble sub-epidemic frameworks and other time series models for the 2022–2023 mpox epidemic
A. Bleichrodt, R. Luo, Alexander S. Kirpich, G. Chowell
2024Royal Society Open Science13 citations Open access
Semantic Scholar
Convergent evolution of diverse Bacillus anthracis outbreak strains toward altered surface oligosaccharides that modulate anthrax pathogenesis
Michael H. Norris, Alexander S. Kirpich, A. Bluhm, Diansy Zincke +3 more
2020PLoS Biology13 citations Open access
Semantic Scholar
Controlling cholera in the Ouest Department of Haiti using oral vaccines
Alexander S. Kirpich, Thomas A. Weppelmann, Yang Yang, J. Morris +1 more
2017PLoS Neglected Tropical Diseases13 citations Open access
Semantic Scholar
Transmission dynamics and forecasts of the COVID-19 pandemic in Mexico, March-December 2020
A. Tariq, J. Banda, P. Skums, Sushma Dahal +12 more
2021PLoS ONE12 citations Open access
Semantic Scholar
Investigating the first stage of the COVID-19 pandemic in Ukraine using epidemiological and genomic data
Y. Gankin, A. Nemira, Vladimir Koniukhovskii, G. Chowell +3 more
2021medRxiv12 citations Open access
Semantic Scholar
A comprehensive analysis of myocardial substrate preference emphasizes the need for a synchronized fluxomic/metabolomic research design.
Mukundan Ragavan, Alexander S. Kirpich, Xiao-Rong Fu, Shawn C. Burgess +2 more
2017American Journal of Physiology. Heart and Circulatory Physiology12 citations Open access
Semantic Scholar
SARS-CoV-2 transmission dynamics in Belarus in 2020 revealed by genomic and incidence data analysis
A. Nemira, A. E. Adeniyi, Elena L. Gasich, K. Y. Bulda +5 more
2021Communications Medicine10 citations Open access
Semantic Scholar
Development of an interactive, agent-based local stochastic model of COVID-19 transmission and evaluation of mitigation strategies illustrated for the state of Massachusetts, USA
Alexander S. Kirpich, Vladimir Koniukhovskii, V. Shvartc, P. Skums +5 more
2020medRxiv10 citations Open access
Semantic Scholar
Superfund Locations and Potential Associations with Cancer Incidence in Florida
Alexander S. Kirpich, E. Leary
201710 citations Open access
Semantic Scholar
Excess mortality in Ukraine during the course of COVID-19 pandemic in 2020–2021
Aleksandr Shishkin, Pema Lhewa, Chen Yang, Y. Gankin +4 more
2023Scientific Reports9 citations Open access
Semantic Scholar
Genomic and Phylogenetic Analysis of Bacillus cereus Biovar anthracis Isolated from Archival Bone Samples Reveals Earlier Natural History of the Pathogen
Michael H. Norris, Diansy Zincke, D. J. Daegling, J. Krigbaum +4 more
2023Pathogens7 citations Open access
Semantic Scholar
Novel Efficient Multistage Lead Optimization Pipeline Experimentally Validated for DYRK1B Selective Inhibitors
Vadim Alexandrov, M. Vilenchik, O. Kantidze, Nika Tsutskiridze +5 more
2022Journal of Medicinal Chemistry7 citations Open access
Semantic Scholar
Indirect supervision applied to COVID-19 and pneumonia classification
V. Danilov, A. Proutski, A. Karpovsky, Alexander S. Kirpich +7 more
2021Informatics in Medicine Unlocked7 citations Open access
Semantic Scholar
Transmission dynamics and forecasts of the COVID-19 pandemic in Mexico, March 20-November 11, 2020.
A. Tariq, J. Banda, P. Skums, Sushma Dahal +12 more
2021medRxiv6 citations Open access
Semantic Scholar
Kinetic Analysis of Hepatic Metabolism Using Hyperpolarized Dihydroxyacetone
Alexander S. Kirpich, Mukundan Ragavan, J. Bankson, L. McIntyre +1 more
2019Journal of Chemical Information and Modeling6 citations Open access
Semantic Scholar
An investigation of the seasonal relationships between meteorological factors, water quality, and sporadic cases of Legionnaires’ disease in Washington, DC
Alexander S. Kirpich, Aleksandr Shishkin, Pema Lhewa, Cheng Yang +3 more
2023Epidemiology and Infection4 citations Open access
Semantic Scholar
Beyond the spore, the exosporium sugar anthrose impacts vegetative Bacillus anthracis gene regulation in cis and trans
Michael H. Norris, A. Bluhm, Morgan C. Metrailer, Treenate Jiranantasak +4 more
2023Scientific Reports3 citations Open access
Semantic Scholar
A multi-reference poly-conformational method for in silico design, optimization, and repositioning of pharmaceutical compounds illustrated for selected SARS-CoV-2 ligands
Vadim Alexandrov, Alexander S. Kirpich, O. Kantidze, Y. Gankin
2022PeerJ3 citations Open access
Semantic Scholar
SARS-CoV-2 transmission dynamics in Belarus revealed by genomic and incidence data analysis.
A. Nemira, A. E. Adeniyi, Elena L. Gasich, K. Y. Bulda +5 more
2021medRxiv2 citations Open access
Semantic Scholar
255 Structure, Staffing, and Strain: Lessons from U.S. Infection Preventionists on Building Resilient Systems Post–COVID-19
Lisa M. Casanova, Alexander S. Kirpich, Alicia Daubon, Nneka Odimgbe +1 more
2026Antimicrobial Stewardship and Healthcare Epidemiology0 citations Open access
Semantic Scholar
Evaluation of a Produce Prescription-Style Cooking Demonstration and Education Program on Food Bag Utilization Behaviors Among U.S. College Students: A Protocol
Nida Shaikh, Preethi Byrapaka, Joshua Simpkins, Cecilia Tran +1 more
2026Current Developments in Nutrition0 citations Open access
Semantic Scholar
Forecasting the Diabetes Burden Across USA-Mexico Border States Through 2030: A Multi-Indicator, Multi-Model Analysis
Kaustubh Wagh, Alexander S. Kirpich, Ike Okosun, Sun-Mi Lee +2 more
2025medRxiv0 citations Open access
Semantic Scholar
Phylodynamics analysis of HIV epidemic history in Belarus in 1987–2022
Alexander S. Kirpich, A. Nemira, A. E. Adeniyi, Aleksandr Shishkin +6 more
2025Frontiers in Epidemiology0 citations Open access
Semantic Scholar
Influence of Pre-Season Antibodies against Influenza Virus on Risk of Influenza Infection among Health Care Personnel.
G. Gorse, S. Rattigan, Alexander S. Kirpich, M. Simberkoff +9 more
2021Journal of Infectious Diseases0 citations
Semantic Scholar
Multi-reference Computational Method for De-novo Design, Optimization, and Repositioning of Pharmaceutical Compounds Illustrated by Identifying Multi-target SARS-CoV-2 Ligands
Vadim Alexandrov, Alexander S. Kirpich, Y. Gankin
20210 citations Open access
Semantic Scholar
An investigation of spatial-temporal patterns and predictions of the COVID-19 pandemic in Colombia, 2020-2021
A. Tariq, T. Chakhaia, Sushma Dahal, Alexander C. Ewing +15 more
2021medRxiv0 citations Open access
Semantic Scholar
Correction: Convergent evolution of diverse Bacillus anthracis outbreak strains toward altered surface oligosaccharides that modulate anthrax pathogenesis
Michael H. Norris, Alexander S. Kirpich, A. Bluhm, Diansy Zincke +3 more
2021PLoS Biology0 citations Open access
Semantic Scholar
Untargeted Metabolomic Analysis of Gestationally Matched Human and Bovine Milk Samples at 2-Weeks Postnatal
D. Lemas, Xinsong Du, B. Dado-Senn, Marina Magalhães +9 more
2020Current Developments in Nutrition0 citations Open access
Semantic Scholar
Multi-reference Poly-conformational Computational Methods for De-novo Design, Optimization, and Repositioning of Pharmaceutical Compounds.
Vadim Alexandrov, Alexander S. Kirpich, Y. Gankin
20200 citations Open access
Semantic Scholar
410. Influence of Pre-season Antibody Titers to Influenza on Influenza Risk in a Cohort of Healthcare Personnel
S. Rattigan, G. Gorse, Alexander S. Kirpich, D. Cummings +10 more
2019Open Forum Infectious Diseases0 citations Open access
Semantic Scholar
Correction: Cholera Transmission in Ouest Department of Haiti: Dynamic Modeling and the Future of the Epidemic
Alexander S. Kirpich, Thomas A. Weppelmann, Yang Yang, Afsar Ali +2 more
2016PLoS Neglected Tropical Diseases0 citations Open access
Semantic Scholar

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