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D. Delneri · SciRah

Researcher profile · Semantic Scholar

D. Delneri

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D. Delneri — researcher profile on SciRah

h-index: 35
Works: 107
Citations: 3,207

Most-cited papers

Engineering evolution to study speciation in yeasts
D. Delneri, I. Colson, S. Grammenoudi, I. Roberts +2 more
2003Nature254 citations
Semantic Scholar
Plasticity of genetic interactions in metabolic networks of yeast
Richard J Harrison, Balázs Papp, Csaba Pál, S. Oliver +1 more
2007Proceedings of the National Academy of Sciences of the United States of America198 citations Open access
Semantic Scholar
Genome-wide analysis of yeast stress survival and tolerance acquisition to analyze the central trade-off between growth rate and cellular robustness
A. Zakrzewska, Gerco van Eikenhorst, Johanna E. C. Burggraaff, D. Vis +5 more
2011Molecular Biology of the Cell176 citations Open access
Semantic Scholar
Genome-wide analysis and proteomic studies reveal APE1/Ref-1 multifunctional role in mammalian cells
C. Vascotto, L. Cesaratto, Leo A. H. Zeef, M. Deganuto +10 more
2009Proteomics103 citations Open access
Semantic Scholar
Identification and characterization of high-flux-control genes of yeast through competition analyses in continuous cultures
D. Delneri, D. Hoyle, Konstantinos Gkargkas, E. Cross +8 more
2008Nature Genetics103 citations
Semantic Scholar
New generation of loxP‐mutated deletion cassettes for the genetic manipulation of yeast natural isolates
Z. Carter, D. Delneri
2010Yeast85 citations
Semantic Scholar
Environmental systems biology of cold-tolerant phenotype in Saccharomyces species adapted to grow at different temperatures
C. Paget, Jean-Marc Schwartz, D. Delneri
2014Molecular Ecology78 citations Open access
Semantic Scholar
Evolutionary Systems Biology of Amino Acid Biosynthetic Cost in Yeast
M. D. Barton, D. Delneri, S. Oliver, M. Rattray +1 more
2010PLoS ONE78 citations Open access
Semantic Scholar
Non-coding RNAs and disease: the classical ncRNAs make a comeback
R. A. de Almeida, M. Fraczek, Steven Parker, D. Delneri +1 more
2016Biochemical Society Transactions73 citations Open access
Semantic Scholar
Sequencing and Characterisation of Rearrangements in Three S. pastorianus Strains Reveals the Presence of Chimeric Genes and Gives Evidence of Breakpoint Reuse
Sarah K. Hewitt, I. Donaldson, S. Lovell, D. Delneri
2013PLoS ONE73 citations Open access
Semantic Scholar
Saccharomyces jurei sp. nov., isolation and genetic identification of a novel yeast species from Quercus robur
Samina Naseeb, S. James, Haya Alsammar, C. Michaels +6 more
2017International Journal of Systematic and Evolutionary Microbiology71 citations Open access
Semantic Scholar
Knock-in reconstitution studies reveal an unexpected role of Cys-65 in regulating APE1/Ref-1 subcellular trafficking and function
C. Vascotto, Elena Bisetto, Meng-Xia Li, Leo A. H. Zeef +10 more
2011Molecular Biology of the Cell69 citations Open access
Semantic Scholar
Cellular Processes and Pathways That Protect Saccharomyces cerevisiae Cells against the Plasma Membrane-Perturbing Compound Chitosan
A. Zakrzewska, A. Boorsma, D. Delneri, S. Brul +2 more
2007Eukaryotic Cell68 citations Open access
Semantic Scholar
An update on the diversity, ecology and biogeography of the Saccharomyces genus
Haya Alsammar, D. Delneri
2020FEMS Yeast Research62 citations Open access
Semantic Scholar
Application of the comprehensive set of heterozygous yeast deletion mutants to elucidate the molecular basis of cellular chromium toxicity
Sara L Holland, E. Lodwig, Theodora Sideri, Tom Reader +6 more
2007Genome Biology61 citations Open access
Semantic Scholar
High‐Throughput Gene Replacement in Aspergillus fumigatus
Can Zhao, M. Fraczek, Lauren Dineen, R. Lebedinec +6 more
2019Current Protocols in Microbiology60 citations Open access
Semantic Scholar
Chimeric Protein Complexes in Hybrid Species Generate Novel Phenotypes
E. Piątkowska, Samina Naseeb, David R. Knight, D. Delneri
2012PLoS Genetics55 citations Open access
Semantic Scholar
Intron Evolution in Saccharomycetaceae
Katarzyna B. Hooks, D. Delneri, S. Griffiths-Jones
2014Genome Biology and Evolution53 citations Open access
Semantic Scholar
Fusel Alcohols Regulate Translation Initiation by Inhibiting eIF2B to Reduce Ternary Complex in a Mechanism That May Involve Altering the Integrity and Dynamics of the eIF2B Body
Eleanor Taylor, S. Campbell, Christian D. Griffiths, Peter J. Reid +6 more
2010Molecular Biology of the Cell51 citations Open access
Semantic Scholar
Gene Duplication and Environmental Adaptation within Yeast Populations
Ryan M. Ames, Bharat M. Rash, Kathryn E. Hentges, D. Robertson +2 more
2010Genome Biology and Evolution51 citations Open access
Semantic Scholar
History of genome editing in yeast
M. Fraczek, Samina Naseeb, D. Delneri
2018Yeast50 citations Open access
Semantic Scholar
Effects of reciprocal chromosomal translocations on the fitness of Saccharomyces cerevisiae
I. Colson, D. Delneri, Stephen G. Oliver
2004EMBO Reports48 citations Open access
Semantic Scholar
Widespread Impact of Chromosomal Inversions on Gene Expression Uncovers Robustness via Phenotypic Buffering
Samina Naseeb, Z. Carter, D. Minnis, I. Donaldson +2 more
2016Molecular biology and evolution47 citations Open access
Semantic Scholar
Impact of Chromosomal Inversions on the Yeast DAL Cluster
Samina Naseeb, D. Delneri
2012PLoS ONE46 citations Open access
Semantic Scholar
GIMS: an integrated data storage and analysis environment for genomic and functional data
Michael J. Cornell, N. Paton, Cornelia Hedeler, Paul Kirby +3 more
2003Yeast46 citations
Semantic Scholar
Whole Genome Sequencing, de Novo Assembly and Phenotypic Profiling for the New Budding Yeast Species Saccharomyces jurei
Samina Naseeb, Haya Alsammar, Timothy A. Burgis, I. Donaldson +3 more
2018G3: Genes, Genomes, Genetics43 citations Open access
Semantic Scholar
Large-scale profiling of noncoding RNA function in yeast
Steven Parker, M. Fraczek, Jian Wu, Sara Shamsah +9 more
2018PLoS Genetics40 citations Open access
Semantic Scholar
Rapid functional and evolutionary changes follow gene duplication in yeast
Samina Naseeb, Ryan M. Ames, D. Delneri, S. Lovell
2017Proceedings of the Royal Society of London. Biological Sciences39 citations Open access
Semantic Scholar
Restoring fertility in yeast hybrids: Breeding and quantitative genetics of beneficial traits
Samina Naseeb, Federico Visinoni, Yue Hu, Alex J. Hinks Roberts +5 more
2021Proceedings of the National Academy of Sciences of the United States of America36 citations Open access
Semantic Scholar
Novel Intronic RNA Structures Contribute to Maintenance of Phenotype in Saccharomyces cerevisiae
Katarzyna B. Hooks, Samina Naseeb, Steven Parker, S. Griffiths-Jones +1 more
2016Genetics36 citations Open access
Semantic Scholar
Fast and Reliable PCR Amplification from Aspergillus fumigatus Spore Suspension Without Traditional DNA Extraction
M. Fraczek, Can Zhao, Lauren Dineen, R. Lebedinec +3 more
2019Current Protocols in Microbiology35 citations Open access
Semantic Scholar
Non-coding RNAs in Saccharomyces cerevisiae: What is the function?
Jian Wu, D. Delneri, R. O'Keefe
2012Biochemical Society Transactions31 citations Open access
Semantic Scholar
Genome-wide analysis of longevity in nutrient-deprived Saccharomyces cerevisiae reveals importance of recycling in maintaining cell viability.
H. Davey, E. Cross, C. Davey, Konstantinos Gkargkas +5 more
2012Environmental Microbiology31 citations
Semantic Scholar
Functional and transcriptional profiling of non-coding RNAs in yeast reveal context-dependent phenotypes and in trans effects on the protein regulatory network
L. N. Balarezo-Cisneros, Steven Parker, M. Fraczek, S. Timouma +4 more
2021PLoS Genetics29 citations Open access
Semantic Scholar
Biotechnological exploitation of Saccharomyces jurei and its hybrids in craft beer fermentation uncovers new aroma combinations
Konstantina Giannakou, Federico Visinoni, Penghan Zhang, Nishan Nathoo +4 more
2021bioRxiv29 citations Open access
Semantic Scholar
Genomic Adaptation of Saccharomyces Species to Industrial Environments
Konstantina Giannakou, M. Cotterrell, D. Delneri
2020Frontiers in Genetics28 citations Open access
Semantic Scholar
Identification of secondary targets of N-containing bisphosphonates in mammalian cells via parallel competition analysis of the barcoded yeast deletion collection
Nicoletta Bivi, M. Romanello, Richard J Harrison, I. Clarke +7 more
2009Genome Biology28 citations Open access
Semantic Scholar
Targeted metagenomics approach to capture the biodiversity of Saccharomyces genus in wild environments
Haya Alsammar, Samina Naseeb, Lorenzo B Brancia, R. Gilman +2 more
2019Environmental Microbiology Reports25 citations Open access
Semantic Scholar
Functional analysis of the Aspergillus fumigatus kinome identifies a druggable DYRK kinase that regulates septal plugging
N. van Rhijn, Can Zhao, Narjes Alfuraiji, I. Storer +17 more
2024Nature Communications24 citations Open access
Semantic Scholar
Plasticity of Mitochondrial DNA Inheritance and Its Impact on Nuclear Gene Transcription in Yeast Hybrids
Sarah K. Hewitt, Kobchai Duangrattanalert, Timothy A. Burgis, Leo A. H. Zeef +2 more
2018bioRxiv22 citations Open access
Semantic Scholar
Probing (macro)molecular transport through cell walls.
Giona Kilcher, D. Delneri, C. Duckham, N. Tirelli
2008Faraday discussions22 citations
Semantic Scholar
Transcriptome and proteome analysis of osteocytes treated with nitrogen-containing bisphosphonates.
Nicoletta Bivi, J. Bereszczak, M. Romanello, Leo A. H. Zeef +5 more
2009Journal of Proteome Research21 citations Open access
Semantic Scholar
Barcode technology in yeast: application to pharmacogenomics.
D. Delneri
2010FEMS Yeast Research19 citations Open access
Semantic Scholar
Telomere-to-telomere genome sequence of the model mould pathogen Aspergillus fumigatus
P. Bowyer, A. Currin, D. Delneri, M. Fraczek
2022Nature Communications18 citations Open access
Semantic Scholar
A resource for functional profiling of noncoding RNA in the yeast Saccharomyces cerevisiae
Steven Parker, M. Fraczek, Jian Wu, Sara Shamsah +7 more
2017RNA: A publication of the RNA Society18 citations Open access
Semantic Scholar
Osteoblastic cell secretome: a novel role for progranulin during risedronate treatment
M. Romanello, E. Piątkowska, G. Antoniali, L. Cesaratto +4 more
2013Bone18 citations Open access
Semantic Scholar
Effect of Hanseniaspora vineae and Saccharomyces cerevisiae co-fermentations on aroma compound production in beer.
Jose E Aguiar-Cervera, Federico Visinoni, Penghan Zhang, Katherine A. Hollywood +3 more
2024Food microbiology17 citations Open access
Semantic Scholar
Characterization and Prediction of Haploinsufficiency Using Systems-Level Gene Properties in Yeast
M. Norris, S. Lovell, D. Delneri
2013G3: Genes, Genomes, Genetics16 citations Open access
Semantic Scholar
Aneuploidy influences the gene expression profiles in Saccharomyces pastorianus group I and II strains during fermentation
Roberto de la Cerda Garcia-Caro, K. Hokamp, F. Roche, Georgia Thompson +3 more
2021bioRxiv13 citations Open access
Semantic Scholar
Transcriptional Profile of the Industrial Hybrid Saccharomyces pastorianus Reveals Temperature-Dependent Allele Expression Bias and Preferential Orthologous Protein Assemblies
S. Timouma, L. N. Balarezo-Cisneros, Javier Pinto, Roberto De La Cerda +3 more
2021Molecular biology and evolution11 citations Open access
Semantic Scholar

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M. Fraczek×8
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Leo A. H. Zeef×5
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Steven Parker — researcher profile on SciRah

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D. Hoyle — researcher profile on SciRah

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