Researcher profile · Semantic Scholar

S. Schmedes

h-index: 18
Works: 31
Citations: 1,952

Most-cited papers

A draft genome of Yersinia pestis from victims of the Black Death
K. Bos, V. Schuenemann, G. Golding, Hernán A. Burbano +12 more
2011Nature684 citations Open access
Semantic Scholar
Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid of Yersinia pestis from victims of the Black Death
V. Schuenemann, K. Bos, S. DeWitte, S. Schmedes +9 more
2011Proceedings of the National Academy of Sciences of the United States of America227 citations Open access
Semantic Scholar
Evaluation of the Illumina(®) Beta Version ForenSeq™ DNA Signature Prep Kit for use in genetic profiling.
Jennifer D. Churchill, S. Schmedes, J. King, B. Budowle
2016Forensic Science International: Genetics199 citations
Semantic Scholar
Forensic Human Identification Using Skin Microbiomes
S. Schmedes, A. Woerner, B. Budowle
2017Applied and Environmental Microbiology102 citations Open access
Semantic Scholar
Targeted sequencing of clade-specific markers from skin microbiomes for forensic human identification.
S. Schmedes, A. Woerner, Nicole M. M. Novroski, F. Wendt +3 more
2018Forensic Science International: Genetics101 citations
Semantic Scholar
Expansion of Microbial Forensics
S. Schmedes, A. Sajantila, B. Budowle
2016Journal of Clinical Microbiology95 citations Open access
Semantic Scholar
Next-Generation Sequencing and Bioinformatics Protocol for Malaria Drug Resistance Marker Surveillance
Eldin Talundzic, Shashidhar Ravishankar, Julia Kelley, Dhruviben Patel +9 more
2018Antimicrobial Agents and Chemotherapy73 citations Open access
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Validation of high throughput sequencing and microbial forensics applications
B. Budowle, N. Connell, Anna Bielecka-Oder, R. Colwell +12 more
2014Investigative Genetics70 citations Open access
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Forensic human identification with targeted microbiome markers using nearest neighbor classification.
A. Woerner, Nicole M. M. Novroski, F. Wendt, Angie Ambers +3 more
2019Forensic Science International: Genetics61 citations
Semantic Scholar
Therapeutic Efficacy of Artemisinin-Based Combination Therapies in Democratic Republic of the Congo and Investigation of Molecular Markers of Antimalarial Resistance.
L. Moriarty, Papy Mandoko Nkoli, J. Likwela, P. M. Mulopo +18 more
2021American Journal of Tropical Medicine and Hygiene42 citations Open access
Semantic Scholar
A Comparison and Integration of MiSeq and MinION Platforms for Sequencing Single Source and Mixed Mitochondrial Genomes
Michael R. Lindberg, S. Schmedes, F. Hewitt, Jamie L Haas +3 more
2016PLoS ONE38 citations Open access
Semantic Scholar
Development of an amplicon-based sequencing approach in response to the global emergence of mpox
Nicholas F. G. Chen, C. Chaguza, Luc A. Gagne, M. Doucette +67 more
2023PLoS Biology37 citations Open access
Semantic Scholar
Increasing the reach of forensic genetics with massively parallel sequencing
B. Budowle, S. Schmedes, F. Wendt
2017Forensic Science, Medicine, and Pathology30 citations
Semantic Scholar
Plasmodium falciparum kelch 13 Mutations, 9 Countries in Africa, 2014–2018
S. Schmedes, Dhruviben Patel, S. Dhal, Julia Kelley +22 more
2021Emerging Infectious Diseases29 citations Open access
Semantic Scholar
A high volume extraction and purification method for recovering DNA from human bone.
Pamela L. Marshall, Monika Stoljarova, S. Schmedes, J. King +1 more
2014Forensic Science International: Genetics29 citations
Semantic Scholar
Effective removal of co-purified inhibitors from extracted DNA samples using synchronous coefficient of drag alteration (SCODA) technology
S. Schmedes, Pamela L. Marshall, J. King, B. Budowle
2013Zeitschrift für Rechtsmedizin25 citations
Semantic Scholar
Targeted deep amplicon sequencing of antimalarial resistance markers in Plasmodium falciparum isolates from Cameroon.
Mariangela L’Episcopia, Julia Kelley, Bruna G. Djeunang Dongho, Dhruviben Patel +8 more
2021International Journal of Infectious Diseases24 citations Open access
Semantic Scholar
Targeted deep amplicon sequencing of kelch 13 and cytochrome b in Plasmodium falciparum isolates from an endemic African country using the Malaria Resistance Surveillance (MaRS) protocol
Mariangela L’Episcopia, Julia Kelley, Dhruviben Patel, S. Schmedes +9 more
2020Parasites & Vectors20 citations Open access
Semantic Scholar
Containment of a Verona Integron-Encoded Metallo-Beta-Lactamase-Producing Pseudomonas aeruginosa Outbreak Associated With an Acute Care Hospital Sink—Tennessee, 2018–2020
Allison Chan, Katie Thure, Kelley M. Tobey, Alicia Shugart +13 more
2023Open Forum Infectious Diseases13 citations Open access
Semantic Scholar
Using the Plasmodium mitochondrial genome for classifying mixed-species infections and inferring the geographical origin of P. falciparum parasites imported to the U.S.
S. Schmedes, Dhruviben Patel, Julia Kelley, V. Udhayakumar +1 more
2019PLoS ONE12 citations Open access
Semantic Scholar
Development of an amplicon-based sequencing approach in response to the global emergence of human monkeypox virus
Nicholas Chen, C. Chaguza, Luc A. Gagne, M. Doucette +67 more
2022medRxiv11 citations Open access
Semantic Scholar
Correcting Inconsistencies and Errors in Bacterial Genome Metadata Using an Automated Curation Tool in Excel (AutoCurE)
S. Schmedes, J. King, B. Budowle
2015Frontiers in Bioengineering and Biotechnology9 citations Open access
Semantic Scholar
Early Emergence Phase of SARS-CoV-2 Delta Variant in Florida, US
E. Cella, Sobur Ali, S. Schmedes, Brittany Rife Magalis +4 more
2022Viruses7 citations Open access
Semantic Scholar
A draft genome of Yersinia pestis from victims of the Black Death
K. Bos, V. Schuenemann, G. Golding, H. Burbano +12 more
2011Nature7 citations Open access
Semantic Scholar
Predicting Plasmodium falciparum infection status in blood using a multiplexed bead-based antigen detection assay and machine learning approaches
S. Schmedes, Rafael Dimbu, L. Steinhardt, J. Lemoine +3 more
2022PLoS ONE4 citations Open access
Semantic Scholar
Forensic human identification using skin microbiome genetic signatures
S. Schmedes, A. Woerner, B. Budowle
2020Microbial Forensics3 citations
Semantic Scholar
2015 Spring
S. Schmedes, B. Budowle, M. Breuer, Allyson R. Keathley +35 more
2 citations
Semantic Scholar
Early emergence phase of SARS-CoV-2 Delta variant in Florida
E. Cella, S. Ali, S. Schmedes, B. Rife +4 more
2022medRxiv0 citations Open access
Semantic Scholar
Verona Integron-Encoded Metallo-Beta-Lactamase (VIM)–Producing Pseudomonas aeruginosa Outbreak Associated with Acute Care
Allison Chan, Alicia Shugart, Albert Burks, Christina Moore +11 more
2021Antimicrobial Stewardship and Healthcare Epidemiology0 citations Open access
Semantic Scholar
Next-generation Sequence-analysis Toolkit (NeST): A standardized bioinformatics framework for analyzing Single Nucleotide Polymorphisms in next-generation sequencing data
Shashidhar Ravishankar, S. Schmedes, Dhruviben Patel, M. Pluciński +3 more
2018bioRxiv0 citations Open access
Semantic Scholar
Genetic profiling of skin microbiomes for forensic human identification
S. Schmedes
20170 citations
Semantic Scholar

Julia Kelley

×5

M. Pluciński×5

N. Lucchi×5

A. Woerner×4

V. Udhayakumar×4

K. Bos×3

V. Schuenemann×3

B. Coombes×3