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Wei-Xiong Zhang · SciRah

Researcher profile · Semantic Scholar

Wei-Xiong Zhang

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Wei-Xiong Zhang — researcher profile on SciRah

h-index: 57
Works: 247
Citations: 11K

Most-cited papers

A Survey of Community Detection Approaches: From Statistical Modeling to Deep Learning
Di Jin, Zhi-Zhi Yu, Pengfei Jiao, Shirui Pan +4 more
2021IEEE Transactions on Knowledge and Data Engineering400 citations Open access
Semantic Scholar
Transcriptome-wide identification of microRNA targets in rice.
Yong-Fang Li, Yun Zheng, Charles Addo-Quaye, Li Zhang +5 more
2010The Plant Journal389 citations Open access
Semantic Scholar
A general co-expression network-based approach to gene expression analysis: comparison and applications
Jianhua Ruan, Angela K. Dean, Wei-Xiong Zhang
2010BMC Systems Biology258 citations Open access
Semantic Scholar
Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome.
Cailin E. Joyce, Xiang Zhou, Jing Xia, C. Ryan +4 more
2011Human Molecular Genetics254 citations Open access
Semantic Scholar
Cassava genome from a wild ancestor to cultivated varieties
Wenquan Wang, Binxiao Feng, Jing-Wu Xiao, Z. Xia +76 more
2014Nature Communications251 citations Open access
Semantic Scholar
Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks
Wei-Xiong Zhang, Shang Gao, Xiang Zhou, P. Chellappan +7 more
2010Plant Molecular Biology247 citations Open access
Semantic Scholar
Modularity Based Community Detection with Deep Learning
Liang Yang, Xiao-Chun Cao, Dong-Xiao He, Chuan Wang +2 more
2016International Joint Conference on Artificial Intelligence239 citations
Semantic Scholar
Semantic Community Identification in Large Attribute Networks
Xiao Wang, Di Jin, Xiao-Chun Cao, Liang Yang +1 more
2016AAAI Conference on Artificial Intelligence211 citations Open access
Semantic Scholar
Graph Convolutional Networks Meet Markov Random Fields: Semi-Supervised Community Detection in Attribute Networks
Di Jin, Ziyang Liu, Wei-Hao Li, Dong-Xiao He +1 more
2019AAAI Conference on Artificial Intelligence150 citations Open access
Semantic Scholar
Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function
Xiaoming Zhang, Jing Xia, Y. Lii, B. E. Barrera-Figueroa +15 more
2012Genome Biology145 citations Open access
Semantic Scholar
Multiple distinct small RNAs originate from the same microRNA precursors
Wei-Xiong Zhang, Shang Gao, Xuefeng Zhou, Jing Xia +4 more
2010Genome Biology137 citations Open access
Semantic Scholar
Comprehensive definition of genome features in Spirodela polyrhiza by high‐depth physical mapping and short‐read DNA sequencing strategies
T. Michael, D. Bryant, R. Gutierrez, Nikolai Borisjuk +16 more
2017The Plant Journal133 citations Open access
Semantic Scholar
SeqTar: an effective method for identifying microRNA guided cleavage sites from degradome of polyadenylated transcripts in plants
Yun Zheng, Yong-Fang Li, R. Sunkar, Wei-Xiong Zhang
2011Nucleic Acids Research114 citations Open access
Semantic Scholar
Joint Identification of Network Communities and Semantics via Integrative Modeling of Network Topologies and Node Contents
Dong-Xiao He, Zhiyong Feng, Di Jin, Xiao-Bao Wang +1 more
2017AAAI Conference on Artificial Intelligence93 citations Open access
Semantic Scholar
Analysis of Alzheimer's disease severity across brain regions by topological analysis of gene co-expression networks
Monika Ray, Wei-Xiong Zhang
2010BMC Systems Biology93 citations Open access
Semantic Scholar
Identification of Novel MicroRNA-Like Molecules Generated from Herpesvirus and Host tRNA Transcripts
Tiffany A. Reese, Jing Xia, L. S. Johnson, Xiang Zhou +2 more
2010Journal of Virology89 citations Open access
Semantic Scholar
A Novel Transition Based Encoding Scheme for Planning as Satisfiability
Ruoyun Huang, Yi-Xin Chen, Wei-Xiong Zhang
2010AAAI Conference on Artificial Intelligence69 citations Open access
Semantic Scholar
Phase Transitions and Backbones of the Asymmetric Traveling Salesman Problem
Wei-Xiong Zhang
2011Journal of Artificial Intelligence Research64 citations Open access
Semantic Scholar
Bacillus cereus AR156 primes induced systemic resistance by suppressing miR825/825* and activating defense-related genes in Arabidopsis
Dong-dong Niu, Jing Xia, Chun-Hao Jiang, Beibei Qi +6 more
2016Journal of Integrative Plant Biology58 citations Open access
Semantic Scholar
Rice Xa21 primed genes and pathways that are critical for combating bacterial blight infection
Hai Peng, Zheng Chen, Zhiwei Fang, Jun-Fei Zhou +7 more
2015Scientific Reports56 citations Open access
Semantic Scholar
Analyzing Heterogeneous Networks With Missing Attributes by Unsupervised Contrastive Learning
Dong-Xiao He, Chundong Liang, Cuiying Huo, Zhiyong Feng +3 more
2022IEEE Transactions on Neural Networks and Learning Systems53 citations
Semantic Scholar
Potential functions of microRNAs in starch metabolism and development revealed by miRNA transcriptome profiling of cassava cultivars and their wild progenitor
Xin Chen, Jing Xia, Z. Xia, Hefang Zhang +4 more
2015BMC Plant Biology53 citations Open access
Semantic Scholar
An accurate and efficient method for large-scale SSR genotyping and applications
Lun Li, Zhiwei Fang, Jun-Fei Zhou, Hong Chen +8 more
2017Nucleic Acids Research50 citations Open access
Semantic Scholar
Noncanonical microRNAs and endogenous siRNAs in normal and psoriatic human skin.
Jing Xia, Cailin E. Joyce, A. Bowcock, Wei-Xiong Zhang
2013Human Molecular Genetics48 citations Open access
Semantic Scholar
Chilling acclimation provides immunity to stress by altering regulatory networks and inducing genes with protective functions in Cassava
Changying Zeng, Zheng Chen, Jing Xia, Kevin Zhang +12 more
2014BMC Plant Biology46 citations Open access
Semantic Scholar
Endogenous small-noncoding RNAs and their roles in chilling response and stress acclimation in Cassava
Jing Xia, Changying Zeng, Zheng Chen, Kevin Zhang +11 more
2014BMC Genomics45 citations Open access
Semantic Scholar
Identification of hybrid node and link communities in complex networks
Dong-Xiao He, Di Jin, Zheng Chen, Wei-Xiong Zhang
2013Scientific Reports45 citations Open access
Semantic Scholar
A non-negative matrix factorization based method for predicting disease-associated miRNAs in miRNA-disease bilayer network
Yingli Zhong, P. Xuan, Xiao Wang, Tiangang Zhang +3 more
2017Bioinform.44 citations Open access
Semantic Scholar
Network-Specific Variational Auto-Encoder for Embedding in Attribute Networks
Di Jin, Bingyi Li, Pengfei Jiao, Dong-Xiao He +1 more
2019International Joint Conference on Artificial Intelligence42 citations Open access
Semantic Scholar
Modeling with Node Degree Preservation Can Accurately Find Communities
Di Jin, Zheng Chen, Dong-Xiao He, Wei-Xiong Zhang
2015AAAI Conference on Artificial Intelligence41 citations Open access
Semantic Scholar
MicroRNAs in normal and psoriatic skin.
Jing Xia, Wei-Xiong Zhang
2014Physiological Genomics38 citations Open access
Semantic Scholar
Interior circular RNA
Xiaoxin Liu, Zhangfeng Hu, Jun-Fei Zhou, C. Tian +7 more
2020RNA Biology35 citations Open access
Semantic Scholar
A Stochastic Model for Detecting Heterogeneous Link Communities in Complex Networks
Dong-Xiao He, Dayou Liu, Di Jin, Wei-Xiong Zhang
2015AAAI Conference on Artificial Intelligence35 citations Open access
Semantic Scholar
SAS+ Planning as Satisfiability
Ruoyun Huang, Yi-Xin Chen, Wei-Xiong Zhang
2014Journal of Artificial Intelligence Research35 citations Open access
Semantic Scholar
Systems and Evolutionary Characterization of MicroRNAs and Their Underlying Regulatory Networks in Soybean Cotyledons
Wolfgang Goettel, Zongrang Liu, Jing Xia, Wei-Xiong Zhang +2 more
2014PLoS ONE33 citations Open access
Semantic Scholar
Do transgenesis and marker-assisted backcross breeding produce substantially equivalent plants? - A comparative study of transgenic and backcross rice carrying bacterial blight resistant gene Xa21
Li-Fen Gao, Yinghao Cao, Zhi-Hui Xia, Guang-Huai Jiang +3 more
2013BMC Genomics33 citations Open access
Semantic Scholar
A Network-Specific Markov Random Field Approach to Community Detection
Dong-Xiao He, Xinxin You, Zhiyong Feng, Di Jin +2 more
2018AAAI Conference on Artificial Intelligence32 citations Open access
Semantic Scholar
Large-scale rewiring of innate immunity circuitry and microRNA regulation during initial rice blast infection
Ze-Yuan Li, Jing Xia, Zheng Chen, Yang Yu +7 more
2016Scientific Reports32 citations Open access
Semantic Scholar
Robust Detection of Link Communities With Summary Description in Social Networks
Di Jin, Xiao-Bao Wang, Dong-Xiao He, J. Dang +1 more
2021IEEE Transactions on Knowledge and Data Engineering31 citations
Semantic Scholar
Effects of early cold stress on gene expression in Chlamydomonas reinhardtii.
Lun Li, Hai Peng, Shenglong Tan, Jun-Fei Zhou +6 more
2020Genomics31 citations Open access
Semantic Scholar
Robust Detection of Link Communities in Large Social Networks by Exploiting Link Semantics
Di Jin, Xiao-Bao Wang, Rui-Fang He, Dong-Xiao He +2 more
2018AAAI Conference on Artificial Intelligence31 citations Open access
Semantic Scholar
Integrative Analysis Using Module-Guided Random Forests Reveals Correlated Genetic Factors Related to Mouse Weight
Zheng Chen, Wei-Xiong Zhang
2013PLoS Comput. Biol.29 citations Open access
Semantic Scholar
Chromosome-Scale Genome Assembly Provides Insights into Speciation of Allotetraploid and Massive Biomass Accumulation of Elephant Grass (Pennisetum purpureum Schum.)
Shengkui Zhang, Z. Xia, Wen-Qing Zhang, Can Li +14 more
2020bioRxiv27 citations Open access
Semantic Scholar
An efficient algorithm for finding all possible input nodes for controlling complex networks
Xizhe Zhang, Jianfei Han, Wei-Xiong Zhang
2017Scientific Reports26 citations Open access
Semantic Scholar
Marginalized Denoising for Link Prediction and Multi-Label Learning
Zheng Chen, Min-Min Chen, Kilian Q. Weinberger, Wei-Xiong Zhang
2015AAAI Conference on Artificial Intelligence26 citations Open access
Semantic Scholar
Latitudinal Clines of the Human Vitamin D Receptor and Skin Color Genes
D. Tiosano, L. Audı́, S. Climer, Wei-Xiong Zhang +6 more
2016G3: Genes, Genomes, Genetics25 citations Open access
Semantic Scholar
Allele-Specific Network Reveals Combinatorial Interaction That Transcends Small Effects in Psoriasis GWAS
S. Climer, A. Templeton, Wei-Xiong Zhang
2014PLoS Comput. Biol.25 citations Open access
Semantic Scholar
Graph Triple-Attention Network for Disease-Related LncRNA Prediction
P. Xuan, Linyun Zhan, H. Cui, Tiangang Zhang +2 more
2021IEEE journal of biomedical and health informatics24 citations
Semantic Scholar
Ten Simple Rules for Writing Research Papers
Wei-Xiong Zhang
2014PLoS Comput. Biol.24 citations Open access
Semantic Scholar
Animal microRNA Target Prediction Using Diverse Sequence-Specific determinants
Yun Zheng, Wei-Xiong Zhang
2010J. Bioinform. Comput. Biol.24 citations
Semantic Scholar

Frequent co-authors

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Di Jin×10
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Wenquan Wang×5

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Li-Fen Gao — researcher profile on SciRah

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Xiang Zhou — researcher profile on SciRah

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Changying Zeng×4

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Hai-Ling Jin×4

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Zheng Chen — researcher profile on SciRah