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S. Haddock · SciRah

Researcher profile · Semantic Scholar

S. Haddock

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S. Haddock — researcher profile on SciRah

h-index: 41
Works: 153
Citations: 9,930

Most-cited papers

Bioluminescence in the sea.
S. Haddock, M. Moline, J. Case
2010Annual Review of Marine Science811 citations
Semantic Scholar
Best Practices for Scientific Computing
G. Wilson, D. Aruliah, C. T. Brown, N. Chue Hong +9 more
2012PLoS Biology726 citations Open access
Semantic Scholar
The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution
Joseph F. Ryan, K. Pang, C. Schnitzler, A. Nguyen +13 more
2013Science667 citations Open access
Semantic Scholar
Recurrent jellyfish blooms are a consequence of global oscillations
R. Condon, C. Duarte, K. Pitt, K. Robinson +18 more
2012Proceedings of the National Academy of Sciences of the United States of America486 citations Open access
Semantic Scholar
Questioning the Rise of Gelatinous Zooplankton in the World's Oceans
R. Condon, W. Graham, C. Duarte, K. Pitt +13 more
2012332 citations Open access
Semantic Scholar
Ancient gene linkages support ctenophores as sister to other animals
Darrin T. Schultz, S. Haddock, J. Bredeson, R. Green +2 more
2023Nature297 citations Open access
Semantic Scholar
Phylogenomic Analyses Support Traditional Relationships within Cnidaria
F. Zapata, F. Goetz, Stephen A. Smith, M. Howison +11 more
2015bioRxiv202 citations Open access
Semantic Scholar
The hidden biology of sponges and ctenophores.
C. Dunn, S. Leys, S. Haddock
2015Trends in Ecology & Evolution197 citations Open access
Semantic Scholar
Opinion: Midwater ecosystems must be considered when evaluating environmental risks of deep-sea mining
J. Drazen, Craig R. Smith, Kristina M. Gjerde, S. Haddock +15 more
2020Proceedings of the National Academy of Sciences of the United States of America187 citations Open access
Semantic Scholar
Genomic organization, evolution, and expression of photoprotein and opsin genes in Mnemiopsis leidyi: a new view of ctenophore photocytes
C. Schnitzler, K. Pang, M. Powers, A. Reitzel +11 more
2012BMC Biology128 citations Open access
Semantic Scholar
Quantification of bioluminescence from the surface to the deep sea demonstrates its predominance as an ecological trait
S. Martini, S. Haddock
2017Scientific Reports121 citations Open access
Semantic Scholar
A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly
W. Francis, Lynne M. Christianson, R. Kiko, M. Powers +2 more
2013BMC Genomics101 citations Open access
Semantic Scholar
Evolutionary relationships among scyphozoan jellyfish families based on complete taxon sampling and phylogenetic analyses of 18S and 28S ribosomal DNA.
K. Bayha, M. Dawson, A. Collins, M. Barbeitos +1 more
2010Integrative and Comparative Biology87 citations
Semantic Scholar
Fluorescent proteins function as a prey attractant: experimental evidence from the hydromedusa Olindias formosus and other marine organisms
S. Haddock, C. Dunn
2015Biology Open69 citations Open access
Semantic Scholar
The genome of the contractile demosponge Tethya wilhelma and the evolution of metazoan neural signalling pathways
W. Francis, M. Eitel, S. Vargas, M. Adamski +5 more
2017bioRxiv62 citations Open access
Semantic Scholar
Observed and modeled bio‐optical, bioluminescent, and physical properties during a coastal upwelling event in Monterey Bay, California
I. Shulman, M. Moline, B. Penta, S. Anderson +2 more
201162 citations Open access
Semantic Scholar
Can vertical migrations of dinoflagellates explain observed bioluminescence patterns during an upwelling event in Monterey Bay, California?
I. Shulman, B. Penta, M. Moline, S. Haddock +3 more
201249 citations Open access
Semantic Scholar
Differential Gene Expression in the Siphonophore Nanomia bijuga (Cnidaria) Assessed with Multiple Next-Generation Sequencing Workflows
Stefan Siebert, Mark D. Robinson, S. Tintori, F. Goetz +5 more
2011PLoS ONE47 citations Open access
Semantic Scholar
Light and vision in the deep-sea benthos: I. Bioluminescence at 500–1000 m depth in the Bahamian Islands
Sönke Johnsen, T. Frank, S. Haddock, E. Widder +1 more
2012Journal of Experimental Biology45 citations Open access
Semantic Scholar
Biochemical characterization of diverse deep-sea anthozoan bioluminescence systems
Manabu Bessho-Uehara, W. Francis, S. Haddock
2020Marine Biology41 citations Open access
Semantic Scholar
Integrating Embryonic Development and Evolutionary History to Characterize Tentacle-Specific Cell Types in a Ctenophore
Leslie S. Babonis, M. DeBiasse, W. Francis, Lynne M. Christianson +4 more
2018Molecular biology and evolution39 citations Open access
Semantic Scholar
Depth- and temperature-specific fatty acid adaptations in ctenophores from extreme habitats
J. Winnikoff, S. Haddock, I. Budin
2021Journal of Experimental Biology38 citations Open access
Semantic Scholar
Distribution and quantification of bioluminescence as an ecological trait in the deep sea benthos
S. Martini, L. Kuhnz, J. Mallefet, S. Haddock
2019Scientific Reports38 citations Open access
Semantic Scholar
The evolution of siphonophore tentilla for specialized prey capture in the open ocean
A. Damian‐Serrano, S. Haddock, C. Dunn
2019Proceedings of the National Academy of Sciences of the United States of America36 citations Open access
Semantic Scholar
New symbiotic associations of hyperiid amphipods (Peracarida) with gelatinous zooplankton in deep waters off California
R. Gasca, R. Hoover, S. Haddock
2014Journal of the Marine Biological Association of the United Kingdom35 citations
Semantic Scholar
Expression and characterization of the calcium-activated photoprotein from the ctenophore Bathocyroe fosteri: insights into light-sensitive photoproteins
M. Powers, Amy G. Mcdermott, Nathan Christopher Shaner, S. Haddock
2012Biochemical and Biophysical Research Communications - BBRC34 citations Open access
Semantic Scholar
Catching Jellies in Immersive Virtual Reality: A Comparative Teleoperation Study of ROVs in Underwater Capture Tasks
Aviv Elor, Tiffany Thang, B. Hughes, A. Crosby +7 more
2021Virtual Reality Software and Technology32 citations
Semantic Scholar
Bathyal feasting: post-spawning squid as a source of carbon for deep-sea benthic communities
Henk-Jan T. Hoving, S. Bush, S. Haddock, B. Robison
2017Proceedings of the Royal Society of London. Biological Sciences30 citations Open access
Semantic Scholar
Using fluorescence and bioluminescence sensors to characterize auto- and heterotrophic plankton communities
M. Messié, I. Shulman, S. Martini, S. Haddock
2019Progress in Oceanography29 citations Open access
Semantic Scholar
Stem cells in Nanomia bijuga (Siphonophora), a colonial animal with localized growth zones
Stefan Siebert, F. Goetz, Samuel H. Church, Pathikrit Bhattacharyya +3 more
2014EvoDevo29 citations Open access
Semantic Scholar
Insights into the biodiversity, behavior, and bioluminescence of deep-sea organisms using molecular and maritime technology
S. Haddock, Lynne M. Christianson, W. Francis, S. Martini +20 more
201728 citations Open access
Semantic Scholar
Hidden diversity of Ctenophora revealed by new mitochondrial COI primers and sequences
Lynne M. Christianson, S. Johnson, Darrin T. Schultz, S. Haddock
2021Molecular Ecology Resources27 citations Open access
Semantic Scholar
Practical Computing for Biologists
C. Dunn, S. Haddock
201027 citations
Semantic Scholar
A chromosome-scale genome assembly and karyotype of the ctenophore Hormiphora californensis
Darrin T. Schultz, W. Francis, Jakob McBroome, Lynne M. Christianson +2 more
2021G326 citations Open access
Semantic Scholar
Improved phylogenetic resolution within Siphonophora (Cnidaria) with implications for trait evolution
C. Munro, Stefan Siebert, F. Zapata, M. Howison +6 more
2018bioRxiv26 citations Open access
Semantic Scholar
A photoactivatable green-fluorescent protein from the phylum Ctenophora
S. Haddock, N. Mastroianni, Lynne M. Christianson
2010Proceedings of the Royal Society of London. Biological Sciences26 citations Open access
Semantic Scholar
Integrating siphonophores into marine food‐web ecology
Elizabeth D. Hetherington, A. Damian‐Serrano, S. Haddock, C. Dunn +1 more
2022Limnology and Oceanography Letters25 citations Open access
Semantic Scholar
Luciferase of the Japanese syllid polychaete Odontosyllis umdecimdonta
Darrin T. Schultz, A. Kotlobay, R. Ziganshin, A. Bannikov +7 more
2018bioRxiv25 citations Open access
Semantic Scholar
Characterizing the secret diets of siphonophores (Cnidaria: Hydrozoa) using DNA metabarcoding
A. Damian‐Serrano, Elizabeth D. Hetherington, C. A. Choy, S. Haddock +2 more
2022PLoS ONE24 citations Open access
Semantic Scholar
Occurrence of Isopenicillin-N-Synthase Homologs in Bioluminescent Ctenophores and Implications for Coelenterazine Biosynthesis
W. Francis, Nathan Christopher Shaner, Lynne M. Christianson, M. Powers +1 more
2015PLoS ONE23 citations Open access
Semantic Scholar
Speciation of pelagic zooplankton: Invisible boundaries can drive isolation of oceanic ctenophores
S. Johnson, J. Winnikoff, Darrin T. Schultz, Lynne M. Christianson +3 more
2022Frontiers in Genetics22 citations Open access
Semantic Scholar
Three Distinct Views of Deep Pelagic Community Composition Based on Complementary Sampling Approaches
Elizabeth D. Hetherington, C. Choy, E. Thuesen, S. Haddock
2022Frontiers in Marine Science22 citations Open access
Semantic Scholar
Characterization of an anthraquinone fluor from the bioluminescent, pelagic polychaete Tomopteris
W. Francis, M. Powers, S. Haddock
2014Luminescence (Chichester, England Print)22 citations Open access
Semantic Scholar
Molecular phylogenetic evidence for the reorganization of the Hyperiid amphipods, a diverse group of pelagic crustaceans.
C. Hurt, S. Haddock, W. Browne
2013Molecular Phylogenetics and Evolution22 citations
Semantic Scholar
Conserved novel ORFs in the mitochondrial genome of the ctenophore Beroe forskalii
Darrin T. Schultz, Jordan M. Eizenga, Russell B. Corbett-Detig, W. Francis +2 more
2020PeerJ20 citations Open access
Semantic Scholar
Honing in on bioluminescent milky seas from space
Steven D. Miller, S. Haddock, W. Straka, C. Seaman +4 more
2021Scientific Reports19 citations Open access
Semantic Scholar
Records of ctenophores from South Africa
M. Gibbons, S. Haddock, G. Matsumoto, C. Foster
2021PeerJ19 citations Open access
Semantic Scholar
Evidence for de novo Biosynthesis of the Luminous Substrate Coelenterazine in Ctenophores
Manabu Bessho-Uehara, Wen-Tao Huang, W. Patry, W. Browne +2 more
2020iScience19 citations Open access
Semantic Scholar
An updated checklist of ctenophores (Ctenophora: Nuda and Tentaculata) of Mexican seas
F. A. Puente Tapia, R. Gasca, A. Schiariti, S. Haddock
202019 citations Open access
Semantic Scholar
Evolution of bioluminescence in Anthozoa with emphasis on Octocorallia
D. DeLeo, Manabu Bessho-Uehara, S. Haddock, C. McFadden +1 more
2024Proceedings of the Royal Society B18 citations Open access
Semantic Scholar

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