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Y. Bertrand · SciRah

Researcher profile · Semantic Scholar

Y. Bertrand

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Y. Bertrand — researcher profile on SciRah

h-index: 17
Works: 35
Citations: 1,948

Most-cited papers

Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data
J. Bengtsson-Palme, M. Ryberg, M. Hartmann, S. Branco +17 more
20131,247 citations Open access
Semantic Scholar
Taxonomic surrogacy in biodiversity assessments, and the meaning of Linnaean ranks
Y. Bertrand, F. Pleijel, Greg W. Rouse
2006145 citations
Semantic Scholar
Incorporating molecular data in fungal systematics: a guide for aspiring researchers
K. Hyde, D. Udayanga, D. Manamgoda, L. Tedersoo +9 more
201386 citations Open access
Semantic Scholar
Phylogenetic Properties of 50 Nuclear Loci in Medicago (Leguminosae) Generated Using Multiplexed Sequence Capture and Next-Generation Sequencing
F. de Sousa, Y. Bertrand, S. Nylinder, B. Oxelman +2 more
2014PLoS ONE56 citations Open access
Semantic Scholar
Phylogenetic perspectives on diversification and character evolution in the species‐rich genus Erysimum (Erysimeae; Brassicaceae) based on a densely sampled ITS approach
H. Moazzeni, S. Zarre, B. Pfeil, Y. Bertrand +4 more
201445 citations
Semantic Scholar
Molecular phylogeny of Acanthophyllum (Caryophyllaceae: Caryophylleae), with emphasis on infrageneric classification
A. Pirani, S. Zarre, B. Pfeil, Y. Bertrand +2 more
201439 citations
Semantic Scholar
Allele phasing is critical to revealing a shared allopolyploid origin of Medicago arborea and M. strasseri (Fabaceae)
J. Eriksson, F. de Sousa, Y. Bertrand, A. Antonelli +2 more
2018BMC Evolutionary Biology34 citations Open access
Semantic Scholar
First Dating of a Recombination Event in Mammalian Tick-Borne Flaviviruses
Y. Bertrand, M. Töpel, Annelie M. Elväng, Wessam Melik +1 more
2012PLoS ONE31 citations Open access
Semantic Scholar
Assignment of homoeologs to parental genomes in allopolyploids for species tree inference, with an example from Fumaria (papaveraceae).
Y. Bertrand, A. Scheen, T. Marcussen, B. Pfeil +2 more
2015Systematic Biology27 citations
Semantic Scholar
Characterization and Dynamics of Repeatomes in Closely Related Species of Hieracium (Asteraceae) and Their Synthetic and Apomictic Hybrids
Danijela Zagorski, M. Hartmann, Y. Bertrand, Ladislava Paštová +3 more
2020Frontiers in Plant Science26 citations Open access
Semantic Scholar
Pastoralism increased vulnerability of a subalpine catchment to flood hazard through changing soil properties
M. Bajard, J. Poulenard, P. Sabatier, Y. Bertrand +11 more
2020Palaeogeography, Palaeoclimatology, Palaeoecology23 citations Open access
Semantic Scholar
Sequencing of a Tick-Borne Encephalitis Virus from Ixodes ricinus Reveals a Thermosensitive RNA Switch Significant for Virus Propagation in Ectothermic Arthropods
Annelie M. Elväng, Wessam Melik, Y. Bertrand, M. Lönn +1 more
2011Vector Borne and Zoonotic Diseases23 citations
Semantic Scholar
The use of chloroplast genome sequences to solve phylogenetic incongruences in Polystachya Hook (Orchidaceae Juss)
Narjara Lopes de Abreu, R. Alves, S. Cardoso, Y. Bertrand +4 more
2018PeerJ21 citations Open access
Semantic Scholar
Types of polychaetous annelids at the Muséum national d'Histoire naturelle, Paris
V. Solís-Weiss, Y. Bertrand, Marie-Noëlle Helléouet, F. Pleijel
200421 citations
Semantic Scholar
Patterns of phylogenetic incongruence in Medicago found among six loci
F. de Sousa, Y. Bertrand, B. Pfeil
2016Plant Systematics and Evolution19 citations
Semantic Scholar
Revisiting Recombination Signal in the Tick-Borne Encephalitis Virus: A Simulation Approach
Y. Bertrand, M. Johansson, P. Norberg
2016PLoS ONE19 citations Open access
Semantic Scholar
Molecular Evolution and Organization of Ribosomal DNA in the Hawkweed Tribe Hieraciinae (Cichorieae, Asteraceae)
J. Fehrer, R. Slavíková, Ladislava Paštová, Jiřina Josefiová +3 more
2021Frontiers in Plant Science17 citations Open access
Semantic Scholar
A cryptic species produced by autopolyploidy and subsequent introgression involving Medicago prostrata (Fabaceae).
J. Eriksson, J. Blanco-Pastor, F. Sousa, Y. Bertrand +1 more
2017Molecular Phylogenetics and Evolution16 citations
Semantic Scholar
Using Genomic Location and Coalescent Simulation to Investigate Gene Tree Discordance in Medicago L.
F. Sousa, Y. Bertrand, J. Doyle, B. Oxelman +1 more
2017Systematic Biology16 citations
Semantic Scholar
Stability and universality in the application of taxon names in phylogenetic nomenclature.
Y. Bertrand, M. Härlin
2006Systematic Biology13 citations
Semantic Scholar
A note on the incidence of reverse complementary fungal ITS sequences in the public sequence databases and a software tool for their detection and reorientation
R. Nilsson, Vilmar Veldre, Zheng Wang, M. Eckart +9 more
2011Mycoscience11 citations Open access
Semantic Scholar
Evolutionary networks from RADseq loci point to hybrid origins of Medicago carstiensis and Medicago cretacea.
J. Blanco-Pastor, Y. Bertrand, I. M. Liberal, Yan-Ling Wei +2 more
2019American-Eurasian journal of botany5 citations Open access
Semantic Scholar
Phylogenetic hypotheses, taxonomic sameness and the reference of taxon names
Y. Bertrand, M. Härlin
20085 citations
Semantic Scholar
A Multigene Phylogeny of Native American Hawkweeds (Hieracium Subgen. Chionoracium, Cichorieae, Asteraceae): Origin, Speciation Patterns, and Migration Routes
J. Fehrer, Y. Bertrand, M. Hartmann, P. Caklová +3 more
2022Plants3 citations Open access
Semantic Scholar
Contrasting the general with the particular in phylogenetics-a proposal to keep the meanings of mono/paraphyletic and clade/grade separated
Y. Bertrand
20082 citations Open access
Semantic Scholar
Robustness of RADseq for evolutionary network reconstruction from gene trees
J. Blanco-Pastor, Y. Bertrand, I. M. Liberal, Yan-Ling Wei +2 more
2018bioRxiv1 citations Open access
Semantic Scholar
De novo transcriptome assembly, annotation, and identification of low-copy number genes in the flowering plant genus Silene (Caryophyllaceae)
Y. Bertrand, A. Petri, A. Scheen, M. Töpel +1 more
2012bioRxiv1 citations Open access
Semantic Scholar
Data for: Higher flood-frequency periods linked to human activities, increased erosion, and rejuvenation of soils in a subalpine catchment
M. Bajard, Y. Bertrand, L. Gielly, A. Develle +11 more
20190 citations Open access
Semantic Scholar
Peer Review #3 of "Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics (v0.2)"
Gustavo A. Bravo, A. Antonelli, C. Bacon, K. Bartoszek +496 more
20190 citations Open access
Semantic Scholar
Peer Review #2 of "The use of chloroplast genome sequences to solve phylogenetic incongruences in Polystachya Hook (Orchidaceae Juss) (v0.1)"
Narjara Lopes de Abreu, Ruy Jos, Vlka Alves, Srgio Ricardo +218 more
20180 citations Open access
Semantic Scholar
The use of next generation sequencing to solve phylogenetic incongruences in Orchidaceae Juss
Narjara Lopes de Abreu, R. Alves, S. Cardoso, Y. Bertrand +4 more
20180 citations Open access
Semantic Scholar
Species individuality and integration
Y. Bertrand
20160 citations
Semantic Scholar
Patterns of phylogenetic incongruence in Medicago found among six loci
F. de Sousa, Y. Bertrand, B. Pfeil
2016Plant Systematics and Evolution0 citations
Semantic Scholar
Historicism and essentialism in phylogenetic biology
Y. Bertrand, M. Härlin
20110 citations
Semantic Scholar
Relationships between nomenclature, phylogenetics and systematics
Y. Bertrand
20080 citations
Semantic Scholar

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