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W. Haerty · SciRah

Researcher profile · Semantic Scholar

W. Haerty

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W. Haerty — researcher profile on SciRah

h-index: 36
Works: 157
Citations: 7,520

Most-cited papers

A comparative genomics multitool for scientific discovery and conservation
D. Genereux, Aitor Serres, J. Armstrong, Jeremy Johnson +44 more
2020Nature347 citations Open access
Semantic Scholar
Adaptation and conservation insights from the koala genome
Rebecca N. Johnson, D. O'Meally, Zhiliang Chen, G. Etherington +50 more
2018Nature Genetics211 citations Open access
Semantic Scholar
Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination
Muluneh Tamiru, Satoshi Natsume, Hiroki Takagi, Benjamen White +28 more
2017BMC Biology139 citations Open access
Semantic Scholar
Long-read sequencing reveals the complex splicing profile of the psychiatric risk gene CACNA1C in human brain
M. Clark, T. Wrzesiński, A. B. Garcia, N. Hall +6 more
2018bioRxiv130 citations Open access
Semantic Scholar
A quantitative framework for characterizing the evolutionary history of mammalian gene expression
Jenny Chen, Ross Swofford, Jeremy Johnson, B. Cummings +5 more
2018Genome Research111 citations Open access
Semantic Scholar
Genome-Wide Analysis of Human Long Noncoding RNAs: A Provocative Review.
C. Ponting, W. Haerty
2022Annual review of genomics and human genetics (Print)93 citations Open access
Semantic Scholar
Standards recommendations for the Earth BioGenome Project
M. Lawniczak, R. Durbin, P. Flicek, K. Lindblad-Toh +41 more
2022Proceedings of the National Academy of Sciences of the United States of America89 citations Open access
Semantic Scholar
Convergent Loss of an EDS1/PAD4 Signaling Pathway in Several Plant Lineages Reveals Coevolved Components of Plant Immunity and Drought Response[OPEN]
E. Baggs, J. G. Monroe, Anil S. Thanki, R. O'Grady +3 more
2020The Plant Cell72 citations Open access
Semantic Scholar
Accurate expression quantification from nanopore direct RNA sequencing with NanoCount
Josie Gleeson, Adrien Léger, Yair D. J. Prawer, Tracy A. Lane +3 more
2021Nucleic Acids Research66 citations Open access
Semantic Scholar
The long non-coding RNA Cerox1 is a post transcriptional regulator of mitochondrial complex I catalytic activity
Tamara M. Sirey, Kenny Roberts, W. Haerty, O. Bedoya-Reina +11 more
2019eLife61 citations Open access
Semantic Scholar
ULK1 and ULK2 are less redundant than previously thought: computational analysis uncovers distinct regulation and functions of these autophagy induction proteins
A. Demeter, Mari Carmen Romero-Mulero, L. Csabai, M. Ölbei +3 more
2020bioRxiv45 citations Open access
Semantic Scholar
Identification of functional long non-coding RNAs in C. elegans
A. Akay, David J Jordan, I. C. Navarro, T. Wrzesiński +3 more
2018BMC Biology42 citations Open access
Semantic Scholar
Long read sequencing reveals novel isoforms and insights into splicing regulation during cell state changes
David J. Wright, N. Hall, N. Irish, Angela L. Man +8 more
2021BMC Genomics40 citations Open access
Semantic Scholar
Autoactive CNGC15 enhances root endosymbiosis in legume and wheat
Nicola M. Cook, Giulia Gobbato, Catherine N. Jacott, Clémence Marchal +11 more
2025Nature37 citations
Semantic Scholar
Regulatory network analysis of Paneth cell and goblet cell enriched gut organoids using transcriptomics approaches
A. Treveil, P. Sudhakar, Z. Matthews, T. Wrzesiński +12 more
2019bioRxiv37 citations Open access
Semantic Scholar
High expression of the MADS-box gene VRT2 increases the number of rudimentary basal spikelets in wheat
A. Backhaus, Ashleigh Lister, M. Tomkins, Nikolai M. Adamski +5 more
2022Plant Physiology36 citations Open access
Semantic Scholar
CACNA1C (CaV1.2) and other L-type calcium channels in the pathophysiology and treatment of psychiatric disorders: Advances from functional genomics and pharmacoepidemiology
Paul J. Harrison, S. M. Husain, Hami Lee, Alejandro De Los Angeles +5 more
2022Neuropharmacology36 citations Open access
Semantic Scholar
Newly discovered cichlid fish biodiversity threatened by hybridization with non‐native species
Tabitha Blackwell, A. Ford, A. Ciezarek, Stephanie J. Bradbeer +10 more
2020Molecular Ecology35 citations Open access
Semantic Scholar
Whole genome resequencing data enables a targeted SNP panel for conservation and aquaculture of Oreochromis cichlid fishes
A. Ciezarek, A. Ford, Graham J. Etherington, N. Kasozi +10 more
2021bioRxiv29 citations Open access
Semantic Scholar
The evolutionary dynamics of microRNAs in domestic mammals
L. Penso-Dolfin, S. Moxon, W. Haerty, F. Di Palma
2018Scientific Reports29 citations Open access
Semantic Scholar
Meiosis and beyond – understanding the mechanistic and evolutionary processes shaping the germline genome
R. Bergero, P. Ellis, W. Haerty, L. Larcombe +18 more
2021Biological Reviews of The Cambridge Philosophical Society28 citations Open access
Semantic Scholar
First large‐scale quantification study of DNA preservation in insects from natural history collections using genome‐wide sequencing
Victoria E. Mullin, W. Stephen, Andres N. Arce, W. Nash +16 more
2022Methods in Ecology and Evolution24 citations Open access
Semantic Scholar
Integrative analysis of Paneth cell proteomic and transcriptomic data from intestinal organoids reveals functional processes dependent on autophagy
E. Jones, Z. Matthews, L. Gul, P. Sudhakar +16 more
2019Disease Models & Mechanisms24 citations Open access
Semantic Scholar
Sequencing smart: De novo sequencing and assembly approaches for a non-model mammal
G. Etherington, D. Heavens, David Baker, Ashleigh Lister +6 more
2019bioRxiv24 citations Open access
Semantic Scholar
Ancient and Recent Hybridization in the Oreochromis Cichlid Fishes
A. Ciezarek, Tarang K. Mehta, Angela L. Man, A. Ford +12 more
2024Molecular biology and evolution20 citations Open access
Semantic Scholar
U6 snRNA m6A modification is required for accurate and efficient splicing of C. elegans and human pre-mRNAs
Aykut Shen, Katarzyna Hencel, Matthew T. Parker, Robyn L Scott +8 more
2024Nucleic Acids Research20 citations Open access
Semantic Scholar
A rather dry subject; investigating the study of arid-associated microbial communities
P. Osborne, L. Hall, N. Kronfeld-Schor, David Thybert +1 more
2020Environmental Microbiome20 citations Open access
Semantic Scholar
A gene expression signature in developing Purkinje cells predicts autism and intellectual disability co-morbidity status
H. Clifford, Anna Dulneva, C. Ponting, W. Haerty +1 more
2019Scientific Reports18 citations Open access
Semantic Scholar
Evolution of regulatory networks associated with traits under selection in cichlids
Tarang K. Mehta, Christopher Koch, W. Nash, Sara A. Knaack +8 more
2021Genome Biology17 citations Open access
Semantic Scholar
Reproductive interference and Satyrisation: mechanisms, outcomes and potential use for insect control
Christina Mitchell, S. Leigh, L. Alphey, W. Haerty +1 more
2022Journal of Pest Science16 citations Open access
Semantic Scholar
Extensive genome introgression between domestic ferret and European polecat during population recovery in Great Britain
G. Etherington, A. Ciezarek, R. Shaw, J. Michaux +3 more
2021bioRxiv15 citations Open access
Semantic Scholar
Comparative Genome Microsynteny Illuminates the Fast Evolution of Nuclear Mitochondrial Segments (NUMTs) in Mammals
Marek Uvizl, Sébastien J. Puechmaille, Sarahjane Power, M. Pippel +5 more
2023Molecular biology and evolution14 citations Open access
Semantic Scholar
Analysis of structural variants in four African cichlids highlights an association with developmental and immune related genes
L. Penso-Dolfin, Angela L. Man, Tarang K. Mehta, W. Haerty +1 more
2018BMC Evolutionary Biology14 citations Open access
Semantic Scholar
Comparative genome microsynteny illuminates the fast evolution of nuclear mitochondrial segments (NUMTs) in mammals
M. Uvizl, Sébastien J. Puechmaille, Sarahjane Power, M. Pippel +5 more
2023bioRxiv13 citations Open access
Semantic Scholar
Single-cell gene and isoform expression analysis reveals signatures of ageing in haematopoietic stem and progenitor cells
L. Mincarelli, Vladimir Uzun, David J. Wright, A. Scoones +3 more
2023Communications Biology13 citations Open access
Semantic Scholar
Spatial Transcriptomics Reveals Expression Gradients in Developing Wheat Inflorescences at Cellular Resolution
Ka-Tie A. Long, Ashleigh Lister, Maximillian R. W. Jones, Nikolai M. Adamski +15 more
2024bioRxiv12 citations Open access
Semantic Scholar
GeneSeqToFamily: a Galaxy workflow to find gene families based on the Ensembl Compara GeneTrees pipeline
Anil S. Thanki, N. Soranzo, W. Haerty, R. Davey
2018GigaScience12 citations Open access
Semantic Scholar
Validation of a novel associative transcriptomics pipeline in Brassica oleracea: identifying candidates for vernalisation response
Shannon Woodhouse, Zhe-Si He, Hugh C. Woolfenden, B. Steuernagel +5 more
2020BMC Genomics11 citations Open access
Semantic Scholar
Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus
G. Etherington, W. Nash, A. Ciezarek, T. Mehta +18 more
2022bioRxiv10 citations Open access
Semantic Scholar
microRNA profiling in the Weddell seal suggests novel regulatory mechanisms contributing to diving adaptation
L. Penso-Dolfin, W. Haerty, A. Hindle, F. Di Palma
2019BMC Genomics10 citations Open access
Semantic Scholar
Schizosaccharomyces versatilis represents a distinct evolutionary lineage of fission yeast
Graham J. Etherington, Elisa Gomez Gil, W. Haerty, Snezhana Oliferenko +1 more
2023bioRxiv9 citations Open access
Semantic Scholar
A comparison of long-read single-cell transcriptomic approaches
Anita L. Ahlert Scoones, Yuxuan Lan, Charlotte Utting, Lydia Pouncey +10 more
2025bioRxiv8 citations Open access
Semantic Scholar
Nanopore direct RNA sequencing detects differential expression between human cell populations
Josie Gleeson, Tracy A. Lane, Paul J. Harrison, W. Haerty +1 more
2020bioRxiv8 citations Open access
Semantic Scholar
Combined single-cell gene and isoform expression analysis in haematopoietic stem and progenitor cells
L. Mincarelli, Vladimir Uzun, S. Rushworth, W. Haerty +1 more
2020bioRxiv8 citations Open access
Semantic Scholar
Colombia's cyberinfrastructure for biodiversity: Building data infrastructure in emerging countries to foster socioeconomic growth
J. D. de Vega, R. Davey, J. Duitama, Dairo Escobar +13 more
2019Plants, People, Planet7 citations Open access
Semantic Scholar
Panhematopoietic RNA barcoding enables kinetic measurements of nucleate and anucleate lineages and the activation of myeloid clones following acute platelet depletion
E. Wojtowicz, Jayna J. Mistry, Vladimir Uzun, C. Hellmich +16 more
2023Genome Biology6 citations Open access
Semantic Scholar
A Galaxy-based training resource for single-cell RNA-sequencing quality control and analyses
G. Etherington, N. Soranzo, S. Mohammed, W. Haerty +2 more
2019GigaScience6 citations Open access
Semantic Scholar
Community-driven ELIXIR activities in single-cell omics
P. Czarnewski, A. Mahfouz, R. Calogero, P. Palagi +23 more
2022F1000Research5 citations Open access
Semantic Scholar
Evolution of miRNA-Binding Sites and Regulatory Networks in Cichlids
Tarang K. Mehta, L. Penso-Dolfin, W. Nash, Sushmita Roy +2 more
2021bioRxiv5 citations Open access
Semantic Scholar
Roadblock: improved annotations do not necessarily translate into new functional insights
N. Hall, Becky C. Carlyle, W. Haerty, E. Tunbridge
2021Genome Biology5 citations Open access
Semantic Scholar

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