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A. Zharkikh · SciRah

Researcher profile · Semantic Scholar

A. Zharkikh

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A. Zharkikh — researcher profile on SciRah

h-index: 30
Works: 81
Citations: 12K

Most-cited papers

A draft sequence of the rice genome (Oryza sativa L. ssp. japonica).
S. Goff, Darrell O. Ricke, Tien-Hung Lan, Gernot G. Presting +51 more
2002Science2,333 citations
Semantic Scholar
The genome of the domesticated apple (Malus × domestica Borkh.)
R. Velasco, A. Zharkikh, J. Affourtit, A. Dhingra +82 more
2010Nature Genetics2,000 citations
Semantic Scholar
A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)
S. Goff, Darrell O. Ricke, Tien-Hung Lan, Gernot G. Presting +51 more
2002Science1,740 citations
Semantic Scholar
Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes
S. Aparício, J. Chapman, E. Stupka, N. Putnam +37 more
2002Science1,606 citations
Semantic Scholar
A High Quality Draft Consensus Sequence of the Genome of a Heterozygous Grapevine Variety
R. Velasco, A. Zharkikh, M. Troggio, Dustin A. Cartwright +53 more
2007PLoS ONE1,018 citations Open access
Semantic Scholar
Comprehensive statistical study of 452 BRCA1 missense substitutions with classification of eight recurrent substitutions as neutral
S. Tavtigian, Amie Deffenbaugh, Luo Yin, T. Judkins +5 more
2005Journal of Medical Genetics687 citations Open access
Semantic Scholar
Estimation of evolutionary distances between nucleotide sequences
A. Zharkikh
1994Journal of Molecular Evolution379 citations
Semantic Scholar
Molecular phylogeny of extant gymnosperms and seed plant evolution: analysis of nuclear 18S rRNA sequences.
S. Chaw, A. Zharkikh, Huang-Mo Sung, Tak-Cheung Lau +1 more
1997Molecular biology and evolution295 citations Open access
Semantic Scholar
Association of BRCA1/2defects with genomic scores predictive of DNA damage repair deficiency among breast cancer subtypes
K. Timms, V. Abkevich, E. Hughes, C. Neff +13 more
2014Breast Cancer Research291 citations Open access
Semantic Scholar
Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock.
A. Zharkikh, Wen-Hsiung Li
1992Molecular biology and evolution208 citations
Semantic Scholar
Analysis of missense variation in human BRCA1 in the context of interspecific sequence variation
V. Abkevich, A. Zharkikh, A. M. Deffenbaugh, David A. Frank +5 more
2004Journal of Medical Genetics171 citations Open access
Semantic Scholar
Estimation of confidence in phylogeny: the complete-and-partial bootstrap technique.
A. Zharkikh, Wen-Hao Li
1995Molecular Phylogenetics and Evolution170 citations
Semantic Scholar
Inconsistency of the Maximum-parsimony Method: the Case of Five Taxa With a Molecular Clock
A. Zharkikh, Wen-Hsiung Li
1993106 citations
Semantic Scholar
A reference integrated map for cultivated grapevine (Vitis vinifera L.) from three crosses, based on 283 SSR and 501 SNP-based markers
S. Vezzulli, M. Troggio, G. Coppola, A. Jermakow +9 more
2008Theoretical and Applied Genetics105 citations
Semantic Scholar
Infectious vaccine-derived rubella viruses emerge, persist, and evolve in cutaneous granulomas of children with primary immunodeficiencies
L. Perelygina, Min-Hsin Chen, S. Suppiah, Adebola B. Adebayo +15 more
2019PLoS Pathogens78 citations Open access
Semantic Scholar
SNP high-throughput screening in grapevine using the SNPlex™ genotyping system
M. Pindo, S. Vezzulli, G. Coppola, Dustin A. Cartwright +3 more
2008BMC Plant Biology76 citations Open access
Semantic Scholar
Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences: II. Four taxa without a molecular clock
A. Zharkikh, Wen-Hsiung Lit
1992Journal of Molecular Evolution73 citations
Semantic Scholar
The Mammalian 2′-5′ Oligoadenylate Synthetase Gene Family: Evidence for Concerted Evolution of Paralogous Oas1 Genes in Rodentia and Artiodactyla
A. Perelygin, A. Zharkikh, S. Scherbik, M. Brinton
2006Journal of Molecular Evolution72 citations
Semantic Scholar
VOSTORG: a package of microcomputer programs for sequence analysis and construction of phylogenetic trees.
A. Zharkikh, A. Rzhetsky, Pavel S. Morosov, T. Sitnikova +1 more
1991Gene66 citations
Semantic Scholar
Evolution of the DAZ gene family suggests that Y-linked DAZ plays little, or a limited, role in spermatogenesis but underlines a recent African origin for human populations.
A. Agulnik, A. Zharkikh, Holly L. Boettger‐Tong, T. Bourgeron +2 more
1998Human Molecular Genetics64 citations
Semantic Scholar
The molecular taxonomy and evolution of the guinea pig.
W. -. Li, Winston A Hide, A. Zharkikh, D. Ma +1 more
1992Journal of Heredity63 citations
Semantic Scholar
Genetic diversity of the genus Malus and implications for linkage mapping with SNPs
D. Micheletti, M. Troggio, A. Zharkikh, F. Costa +3 more
2011Tree Genetics & Genomes53 citations
Semantic Scholar
Genome sequence initiatives
A. Adam-Blondon, O. Jaillon, S. Vezzulli, A. Zharkikh +2 more
201147 citations
Semantic Scholar
Characterization of equine and other vertebrate TLR3, TLR7, and TLR8 genes
N. M. Astakhova, A. Perelygin, A. Zharkikh, T. Lear +3 more
2009Immunogenetics42 citations
Semantic Scholar
Intercalary heterochromatin in Drosophila
V. Bolshakov, A. Zharkikh, Igor F. Zhimulev
1985Chromosoma41 citations
Semantic Scholar
Sequencing and assembly of highly heterozygous genome of Vitis vinifera L. cv Pinot Noir: problems and solutions.
A. Zharkikh, M. Troggio, D. Pruss, A. Cestaro +11 more
2008Journal of Biotechnology40 citations
Semantic Scholar
Structure and evolution of opossum, guinea pig, and porcupine cytochrome b genes
Ma Din-Pow, A. Zharkikh, D. Graur, J. VandeBerg +1 more
1993Journal of Molecular Evolution40 citations
Semantic Scholar
STATISTICAL TESTS OF DNA PHYLOGENIES
Wen-Hsiung Li, A. Zharkikh
199533 citations
Semantic Scholar
The biochemical phylogeny of guinea-pigs and gundis, and the paraphyly of the order rodentia.
D. Graur, Winston A Hide, A. Zharkikh, W. -. Li
1992Comparative biochemistry and physiology. B, Comparative biochemistry33 citations
Semantic Scholar
What is the Bootstrap Technique
Wen-Hsiung Li, A. Zharkikh
199430 citations
Semantic Scholar
The phylogenetic positions of the conifer genera Amentotaxus, Phyllocladus, and Nageia inferred from 18s rRNA sequences
S. Chaw, Huang-Mo Sung, Huei Long, A. Zharkikh +1 more
1995Journal of Molecular Evolution27 citations
Semantic Scholar
The phylogenetic position of taxaceae based on 18S rRNA sequences
S. Chaw, Huei Long, Bin-Shin Wang, A. Zharkikh +1 more
1993Journal of Molecular Evolution24 citations
Semantic Scholar
Concerted evolution of vertebrate CCR2 and CCR5 genes and the origin of a recombinant equine CCR5/2 gene.
A. Perelygin, A. Zharkikh, N. M. Astakhova, T. Lear +1 more
2008Journal of Heredity17 citations Open access
Semantic Scholar
Characterization of the equine 2'-5' oligoadenylate synthetase 1 (OAS1) and ribonuclease L (RNASEL) innate immunity genes
J. Rios, A. Perelygin, Maureen T. Long, T. Lear +3 more
2007BMC Genomics17 citations Open access
Semantic Scholar
Structure of equine 2′-5′oligoadenylate synthetase (OAS) gene family and FISH mapping of OAS genes to ECA8p15→p14 and BTA17q24→q25
A. Perelygin, Teri L. Lear, A. Zharkikh, M. Brinton
2005Cytogenetic and Genome Research15 citations
Semantic Scholar
Seasonal differences and protection by creatine or arginine pretreatment in ischemia of mammalian and molluscan neurons in vitro.
T. Zapara, O. G. Simonova, A. Zharkikh, M. Balestrino +1 more
2004Brain Research15 citations
Semantic Scholar
Quick assessment of similarity of two sequences by comparison of their L-tuple frequencies.
A. Zharkikh, A. Rzhetsky
1993Bio Systems12 citations
Semantic Scholar
Comparative analysis of vertebrate EIF2AK2 (PKR) genes and assignment of the equine gene to ECA15q24–q25 and the bovine gene to BTA11q12–q15
A. Perelygin, T. Lear, A. Zharkikh, M. Brinton
2006Genetics Selection Evolution10 citations Open access
Semantic Scholar
Statistical analysis of L-tuple frequencies in eubacteria and organelles.
T. Sitnikova, A. Zharkikh
1993Bio Systems9 citations
Semantic Scholar
The effects of the dynamic state of the cytoskeleton on neuronal plasticity
T. Zapara, O. G. Simonova, A. Zharkikh, A. S. Ratushnyak
2000Neuroscience and Behavioral Physiology8 citations
Semantic Scholar
Abstract P6-05-10: Association between BRCA1/2 status and DNA-based assays for homologous recombination deficiency in breast cancer
K. Timms, V. Abkevich, C. Neff, B. Morris +9 more
20137 citations
Semantic Scholar
Antiferromagnetic complexes with metal-metal bonds: XXVII. Synthesis, molecular structures and magnetic properties of Cr,Re-clusters Cp2Cr2(μ-SCMe3)2(μ3-S)Re2(CO)9] and Cp2Cr2(μ3-SCMe3) 2(μ3-S)2Re2(CO)6
A. Pasynskii, I. Eremenko, S. Nefedov, B. Orazsakhatov +5 more
19937 citations
Semantic Scholar
Apple genome sequencing and post-genomic program at IASMA Research Center
R. Velasco, M. Troggio, A. Zharkikh, S. Salvi +36 more
20096 citations
Semantic Scholar
An estimation of the degree of the genetic divergence of sibling species Microtus arvalis and Microtus subarvalis (Rodentia) based on electrophoretic analysis
S. M. Zakijan, N. A. Kulbakina, O. Serov, M. Meyer +1 more
1984Biochemical Genetics5 citations
Semantic Scholar
Comparison between whole exome sequencing (WES) and single nucleotide polymorphism (SNP)-based tumor mutation burden analysis.
K. Timms, A. Zharkikh, M. Perry, N. Birkbak +4 more
2019Journal of Clinical Oncology3 citations
Semantic Scholar
A Reference Integrated Map for Cultivated Grapevine (vitis Vinifera L.) from Three Crosses, Based on 283 Ssr and 501 Snp-based Markers
S. Vezzulli, M. Troggio, G. Coppola, A. Jermakow +10 more
20083 citations
Semantic Scholar
Fine cytogenetical analysis of the band 10A1-2 and the adjoining regions in the Drosophila melanogaster X chromosome
A. V. Bgatov, A. Zharkikh, Igor F. Zhimulev
2004Molecular and General Genetics MGG3 citations
Semantic Scholar
Methods for Studying the Evolution of Macromolecules
V. Ratner, A. Zharkikh, N. Kolchanov, S. N. Rodin +2 more
19962 citations
Semantic Scholar
[The effect of changes in the dynamic equilibrium in the microtubular and microfilamentous systems on neuronal plastic reactions].
A. S. Ratushniak, T. Zapara, A. Zharkikh, O. A. Ratushniak
1996Zhurnal vyssheĭ nervnoĭ deiatelnosti imeni I P Pavlova2 citations
Semantic Scholar
Conformational changes in the globin family during evolution
A. Zharkikh, V. V. Solovyov, N. A. Kolchanov
1984Journal of Molecular Evolution2 citations
Semantic Scholar

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