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S. Nishiyama · SciRah

Researcher profile · Semantic Scholar

S. Nishiyama

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S. Nishiyama — researcher profile on SciRah

h-index: 20
Works: 84
Citations: 1,454

Most-cited papers

Fimbrial Proteins of Porphyromonas gingivalis Mediate In Vivo Virulence and Exploit TLR2 and Complement Receptor 3 to Persist in Macrophages1
Min Wang, M. Shakhatreh, D. James, Shuang Liang +4 more
2007Journal of Immunology211 citations
Semantic Scholar
Differential interactions of fimbriae and lipopolysaccharide from Porphyromonas gingivalis with the Toll‐like receptor 2‐centred pattern recognition apparatus
G. Hajishengallis, R. Tapping, E. Harokopakis, S. Nishiyama +6 more
2006Cellular Microbiology182 citations Open access
Semantic Scholar
Involvement of minor components associated with the FimA fimbriae of Porphyromonas gingivalis in adhesive functions.
S. Nishiyama, Y. Murakami, H. Nagata, S. Shizukuishi +2 more
2007Microbiology84 citations Open access
Semantic Scholar
Chemotactic Adaptation Is Altered by Changes in the Carboxy-Terminal Sequence Conserved among the Major Methyl-Accepting Chemoreceptors
Hisashi Okumura, S. Nishiyama, Akie Sasaki, M. Homma +1 more
1998Journal of Bacteriology71 citations Open access
Semantic Scholar
Mlp24 (McpX) of Vibrio cholerae Implicated in Pathogenicity Functions as a Chemoreceptor for Multiple Amino Acids
S. Nishiyama, D. Suzuki, Y. Itoh, Kazuho Suzuki +6 more
2012Infection and Immunity69 citations Open access
Semantic Scholar
Identification of a Vibrio cholerae chemoreceptor that senses taurine and amino acids as attractants
S. Nishiyama, Y. Takahashi, Kentaro Yamamoto, D. Suzuki +6 more
2016Scientific Reports58 citations Open access
Semantic Scholar
Modulation of the Thermosensing Profile of the Escherichia coli Aspartate Receptor Tar by Covalent Modification of Its Methyl-accepting Sites*
Toshifumi Nara, I. Kawagishi, S. Nishiyama, M. Homma +1 more
1996Journal of Biological Chemistry56 citations Open access
Semantic Scholar
A Novel Type of Two‐Component Regulatory System Affecting Gingipains in Porphyromonas gingivalis
Y. Hasegawa, S. Nishiyama, K. Nishikawa, T. Kadowaki +3 more
2003Microbiology and immunology50 citations Open access
Semantic Scholar
Conversion of a bacterial warm sensor to a cold sensor by methylation of a single residue in the presence of an attractant
S. Nishiyama, Tohru Umemura, Toshifumi Nara, M. Homma +1 more
1999Molecular Microbiology46 citations Open access
Semantic Scholar
FimB Regulates FimA Fimbriation in Porphyromonas gingivalis
K. Nagano, Y. Hasegawa, Y. Murakami, S. Nishiyama +1 more
2010Journal of dentistry research45 citations
Semantic Scholar
Thermosensing properties of mutant aspartate chemoreceptors with methyl-accepting sites replaced singly or multiply by alanine
S. Nishiyama, Toshifumi Nara, Michio Homma, Yasuo Imae +1 more
1997Journal of Bacteriology45 citations Open access
Semantic Scholar
Subversion of innate immunity by periodontopathic bacteria via exploitation of complement receptor-3.
G. Hajishengallis, Min Wang, Shuang Liang, M. Shakhatreh +4 more
2008Advances in Experimental Medicine and Biology43 citations Open access
Semantic Scholar
Identification of QTLs controlling chilling and heat requirements for dormancy release and bud break in Japanese apricot (Prunus mume)
Y. Kitamura, T. Habu, H. Yamane, S. Nishiyama +7 more
2018Tree Genetics & Genomes42 citations
Semantic Scholar
Host Adhesive Activities and Virulence of Novel Fimbrial Proteins of Porphyromonas gingivalis
Deanne L. Pierce, S. Nishiyama, Shuang Liang, Min Wang +5 more
2009Infection and Immunity40 citations Open access
Semantic Scholar
Mechanism and implications of CXCR4-mediated integrin activation by Porphyromonas gingivalis
G. Hajishengallis, Megan L. McIntosh, S. Nishiyama, Fuminobu Yoshimura
2013Molecular Oral Microbiology37 citations Open access
Semantic Scholar
Functional and expressional analyses of apple FLC-like in relation to dormancy progress and flower bud development.
S. Nishiyama, M. Matsushita, H. Yamane, C. Honda +4 more
2019Tree Physiology31 citations Open access
Semantic Scholar
Development of Molecular Markers Associated with Sexuality in Diospyros lotus L. and Their Application in D. kaki Thunb.
T. Akagi, Kei Kajita, T. Kibe, H. Morimura +5 more
201430 citations Open access
Semantic Scholar
Genomic insight into the developmental history of southern highbush blueberry populations
S. Nishiyama, Mao Fujikawa, H. Yamane, K. Shirasawa +2 more
2020Heredity28 citations Open access
Semantic Scholar
Dimerization site 2 of the bacterial DNA-binding protein H-NS is required for gene silencing and stiffened nucleoprotein filament formation
Yuki Yamanaka, Ricksen S. Winardhi, Erika Yamauchi, S. Nishiyama +5 more
2018Journal of Biological Chemistry26 citations Open access
Semantic Scholar
Hypoxia‐induced localization of chemotaxis‐related signaling proteins in Vibrio cholerae
Geetha Hiremath, A. Hyakutake, Kentaro Yamamoto, T. Ebisawa +4 more
2015Molecular Microbiology24 citations
Semantic Scholar
RNA-sequencing Analysis Identifies Genes Associated with Chilling-mediated Endodormancy Release in Apple
Takanori Takeuchi, M. Matsushita, S. Nishiyama, H. Yamane +2 more
201820 citations Open access
Semantic Scholar
Mutational Analysis of the P1 Phosphorylation Domain in Escherichia coli CheA, the Signaling Kinase for Chemotaxis
S. Nishiyama, A. Garzón, J. Parkinson
2013Journal of Bacteriology20 citations Open access
Semantic Scholar
Thermosensing Function of the Escherichia coli Redox Sensor Aer
S. Nishiyama, S. Ohno, N. Ohta, Y. Inoue +3 more
2010Journal of Bacteriology20 citations Open access
Semantic Scholar
Inversion of thermosensing property of the bacterial receptor Tar by mutations in the second transmembrane region.
S. Nishiyama, I. Maruyama, Michio Homma, Ikuro Kawagishi
1999Journal of Molecular Biology20 citations
Semantic Scholar
Insights into the Physiological and Molecular Mechanisms Underlying Highbush Blueberry Fruit Growth Affected by the Pollen Source
Kyoka Nagasaka, H. Yamane, S. Nishiyama, S. Ebihara +3 more
202217 citations
Semantic Scholar
Characterization of a gene regulatory network underlying astringency loss in persimmon fruit
S. Nishiyama, N. Onoue, A. Kono, A. Sato +2 more
2018Planta17 citations
Semantic Scholar
Calcium Ions Modulate Amino Acid Sensing of the Chemoreceptor Mlp24 of Vibrio cholerae
Y. Takahashi, S. Nishiyama, K. Sumita, I. Kawagishi +1 more
2019Journal of Bacteriology16 citations Open access
Semantic Scholar
Three-dimensional fruit growth analysis clarifies developmental mechanisms underlying complex shape diversity in persimmon fruit
Akane Kusumi, S. Nishiyama, R. Tao
2023bioRxiv12 citations Open access
Semantic Scholar
Genome-Wide Identification of Loci Associated With Phenology-Related Traits and Their Adaptive Variations in a Highbush Blueberry Collection
Kyoka Nagasaka, S. Nishiyama, Mao Fujikawa, H. Yamane +3 more
2022Frontiers in Plant Science12 citations Open access
Semantic Scholar
Comparative mapping of the ASTRINGENCY locus controlling fruit astringency in hexaploid persimmon (Diospyros kaki Thunb.) with the diploid D. lotus reference genome.
S. Nishiyama, N. Onoue, A. Kono, A. Sato +4 more
201812 citations Open access
Semantic Scholar
Chemotaxis and Related Signaling Systems in Vibrio cholerae
Fuga Omori, H. Tajima, Sotaro Asaoka, S. Nishiyama +2 more
2025Biomolecules10 citations Open access
Semantic Scholar
Chemotactic Behaviors of Vibrio cholerae Cells.
I. Kawagishi, S. Nishiyama
2017Methods in molecular biology9 citations
Semantic Scholar
Genomics-based discrimination of 2n gamete formation mechanisms in polyploids: a case study in nonaploid Diospyros kaki ‘Akiou’
Peng Sun, S. Nishiyama, H. Asakuma, R. Voorrips +2 more
2021G37 citations Open access
Semantic Scholar
Structural basis of the binding affinity of chemoreceptors Mlp24p and Mlp37p for various amino acids.
Y. Takahashi, S. Nishiyama, I. Kawagishi, K. Imada
2019Biochemical and Biophysical Research Communications - BBRC7 citations
Semantic Scholar
Differences in Physiological Characteristics and Gene Expression Levels in Fruits between Japanese Persimmon (Diospyros kaki Thunb.) ‘Hiratanenashi’ and Its Small Fruit Mutant ‘Totsutanenashi’
T. Habu, H. Yamane, I. Naito, S. Nishiyama +4 more
20166 citations Open access
Semantic Scholar
Identification of QTLs controlling chilling and heat requirements for dormancy release and bud break in Japanese apricot (Prunus mume)
Y. Kitamura, T. Habu, H. Yamane, S. Nishiyama +7 more
2018Tree Genetics & Genomes5 citations
Semantic Scholar
Characterization of Tissue-specific Transcriptomic Responses to Seedlessness Induction by Gibberellin in Table Grape
S. Nishiyama, Daisuke Yoshimura, A. Sato, K. Yonemori
2022The Horticulture Journal4 citations Open access
Semantic Scholar
Characterization of a gene regulatory network underlying astringency loss in persimmon fruit
S. Nishiyama, N. Onoue, A. Kono, A. Sato +2 more
2017Planta4 citations
Semantic Scholar
Title Development of Molecular Markers Associated with Sexualityin Diospyros lotus L . and Their Application in D
T. Akagi, T. Tsujimoto, S. Nishiyama, T. Kawai +2 more
20183 citations
Semantic Scholar
IDENTIFICATION OF PLANT HORMONES IN ENDOSPERM LIQUID OF MANGOSTEEN FRUITS AT YOUNG DEVELOPMENTAL STAGES
K. Yonemori, S. Nishiyama, C. Yapwattanaphun, J. Ueda
20143 citations
Semantic Scholar
EFFECT OF ABA TREATMENT ON TANNIN ACCUMULATION AT AN EARLY STAGE OF FRUIT DEVELOPMENT IN PERSIMMON
S. Nishiyama, K. Yonemori, J. Ueda
20143 citations
Semantic Scholar
CheV1 Plays an Important Role in Chemotaxis of Vibrio Cholerae
Geetha Hiremath, S. Nishiyama, I. Kawagishi
20133 citations
Semantic Scholar
The ligand binding domain of Mlp24 with glycine
Y. Takahashi, S. Nishiyama, K. Sumita, I. Kawagishi +1 more
20192 citations Open access
Semantic Scholar
Integer programming for selecting set of informative markers in paternity inference
S. Nishiyama, Kengo Sato, R. Tao
2022BMC Bioinformatics1 citations Open access
Semantic Scholar
Molecular and genetic mechanisms conferring dissolution of dioecy in Diospyros oleifera Cheng
Peng Sun, S. Nishiyama, Hua-Wei Li, Yini Mai +11 more
2022bioRxiv1 citations Open access
Semantic Scholar
Site-Directed and Random Mutagenesis in Porphyromonas gingivalis: Construction of Fimbriae-Related-Gene Mutant.
S. Nishiyama, Y. Hasegawa, K. Nagano
2021Methods in molecular biology1 citations
Semantic Scholar
Structure and Function of the Escherichia coli Thermosensors.
S. Nishiyama, M. Homma, I. Kawagishi
19991 citations Open access
Semantic Scholar
Integer programming for selecting set of informative markers in paternity inference
S. Nishiyama, Kengo Sato, R. Tao
2022BMC Bioinformatics0 citations Open access
Semantic Scholar
Genomic insight into the developmental history of southern highbush blueberry populations
S. Nishiyama, Mao Fujikawa, H. Yamane, K. Shirasawa +2 more
2020Heredity0 citations Open access
Semantic Scholar
The ligand binding domain of Mlp24 with asparagine
Y. Takahashi, K. Sumita, S. Nishiyama, I. Kawagishi +1 more
20190 citations
Semantic Scholar

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