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Y. Yoda · SciRah

Researcher profile · Semantic Scholar

Y. Yoda

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Y. Yoda — researcher profile on SciRah

h-index: 32
Works: 309
Citations: 4,613

Most-cited papers

Direct Observation of an Iron-Bound Terminal Hydride in [FeFe]-Hydrogenase by Nuclear Resonance Vibrational Spectroscopy
E. Reijerse, Cindy C Pham, Vladimir Pelmenschikov, Ryan Gilbert-Wilson +8 more
2017Journal of the American Chemical Society148 citations Open access
Semantic Scholar
X-ray pumping of the 229Th nuclear clock isomer
T. Masuda, A. Yoshimi, Akira Fujieda, H. Fujimoto +26 more
2019Nature103 citations Open access
Semantic Scholar
Spectroscopic and Computational Evidence that [FeFe] Hydrogenases Operate Exclusively with CO-Bridged Intermediates
James A. Birrell, Vladimir Pelmenschikov, Nakul Mishra, Hongxin Wang +6 more
2019Journal of the American Chemical Society72 citations Open access
Semantic Scholar
Reaction Coordinate Leading to H2 Production in [FeFe]-Hydrogenase Identified by NRVS and DFT
Vladimir Pelmenschikov, James A. Birrell, Cindy C Pham, Nakul Mishra +9 more
2017Journal of the American Chemical Society69 citations Open access
Semantic Scholar
Peroxide Activation for Electrophilic Reactivity by the Binuclear Non-heme Iron Enzyme AurF
Kiyoung Park, Ning Li, Yeonju Kwak, Martin Srnec +11 more
2017Journal of the American Chemical Society55 citations Open access
Semantic Scholar
Caught in the Hinact: Crystal Structure and Spectroscopy Reveal a Sulfur Bound to the Active Site of an O2‐stable State of [FeFe] Hydrogenase
Patricia Rodríguez-Macía, L. Galle, Ragnar Bjornsson, Christian Lorent +6 more
2020Angewandte Chemie50 citations Open access
Semantic Scholar
NRVS Studies of the Peroxide Shunt Intermediate in a Rieske Dioxygenase and Its Relation to the Native FeII O2 Reaction
K. Sutherlin, Brent S. Rivard, L. H. Böttger, L. V. Liu +12 more
2018Journal of the American Chemical Society36 citations Open access
Semantic Scholar
Impurity position and lattice distortion in a Mn-doped Bi 2 Te 3 topological insulator investigated by x-ray fluorescence holography and x-ray absorption fine structure
S. Hosokawa, J. Stellhorn, T. Matsushita, N. Happo +12 more
201734 citations
Semantic Scholar
NRVS Definition of the Facial Triad FeIV=O Intermediate in Taurine Dioxygenase: Evaluation of Structural Contributions to Hydrogen Atom Abstraction
Martin Srnec, Shyam R. Iyer, Laura M. K. Dassama, Kiyoung Park +10 more
2020Journal of the American Chemical Society32 citations Open access
Semantic Scholar
Terminal Hydride Species in [FeFe]-Hydrogenases are Vibrationally Coupled to the Active Site Environment
Cindy C Pham, David W. Mulder, Vladimir Pelmenschikov, P. King +9 more
2018Angewandte Chemie32 citations Open access
Semantic Scholar
Nuclear Resonance Vibrational Spectroscopic (NRVS) Definition of the Fe(IV)2 Intermediate Q in Methane Monooxygenase and its Reactivity
Ariel B. Jacobs, R. Banerjee, Dory E. DeWeese, Augustin Braun +13 more
2021Journal of the American Chemical Society31 citations Open access
Semantic Scholar
Structural Relaxation and Viscoelasticity of a Higher Alcohol with Mesoscopic Structure.
T. Yamaguchi, M. Saito, K. Yoshida, T. Yamaguchi +2 more
2018Journal of Physical Chemistry Letters30 citations Open access
Semantic Scholar
Synchrotron radiation-based quasi-elastic scattering using time-domain interferometry with multi-line gamma rays
M. Saito, R. Masuda, Y. Yoda, M. Seto
2017Scientific Reports30 citations Open access
Semantic Scholar
Stepwise assembly of the active site of [NiFe]-hydrogenase
G. Caserta, Sven Hartmann, C. Van Stappen, Chara Karafoulidi-Retsou +12 more
2023Nature Chemical Biology24 citations Open access
Semantic Scholar
Nuclear Resonance Vibrational Spectroscopy: A Modern Tool to Pinpoint Site-Specific Cooperative Processes
Hongxin Wang, A. Braun, S. Cramer, L. Gee +1 more
2021Catalysts19 citations Open access
Semantic Scholar
Investigation of the Structure of Atomically Dispersed NiNx Sites in Ni and N-Doped Carbon Electrocatalysts by 61Ni Mössbauer Spectroscopy and Simulations.
David M. Koshy, M. Hossain, R. Masuda, Y. Yoda +10 more
2022Journal of the American Chemical Society18 citations Open access
Semantic Scholar
Exploring Structure and Function of Redox Intermediates in [NiFe]‐Hydrogenases by an Advanced Experimental Approach for Solvated, Lyophilized and Crystallized Metalloenzymes
Christian Lorent, Vladimir Pelmenschikov, S. Frielingsdorf, J. Schoknecht +9 more
2021Angewandte Chemie18 citations Open access
Semantic Scholar
Hydroxy-bridged resting states of a [NiFe]-hydrogenase unraveled by cryogenic vibrational spectroscopy and DFT computations
G. Caserta, Vladimir Pelmenschikov, Christian Lorent, Armel F. Tadjoung Waffo +11 more
2020Chemical Science18 citations Open access
Semantic Scholar
Direct coordination of pterin to FeII enables neurotransmitter biosynthesis in the pterin-dependent hydroxylases
Shyam R. Iyer, Kasper D. Tidemand, Jeffrey T. Babicz, Ariel B. Jacobs +10 more
2021Proceedings of the National Academy of Sciences of the United States of America17 citations Open access
Semantic Scholar
Relationship between Viscosity and Acyl Tail Dynamics in Lipid Bilayers.
M. Nagao, Elizabeth G. Kelley, A. Faraone, M. Saito +5 more
2021Physical Review Letters16 citations
Semantic Scholar
In Vitro Assembly as a Tool to Investigate Catalytic Intermediates of [NiFe]-Hydrogenase
G. Caserta, Christian Lorent, Vladimir Pelmenschikov, J. Schoknecht +5 more
2020ACS Catalysis16 citations Open access
Semantic Scholar
NRVS definition of O2 intermediates in an extradiol dioxygenase: correlation to crystallography and reactivity
K. Sutherlin, Y. Wasada-Tsutsui, Michael M. Mbughuni, M. Rogers +16 more
2018Journal of the American Chemical Society16 citations Open access
Semantic Scholar
X-ray beam properties available at the nuclear resonant scattering beamline at SPring-8
Y. Yoda
2019Hyperfine Interactions15 citations
Semantic Scholar
Synchrotron-based Nickel Mössbauer Spectroscopy
L. Gee, Chun-Yi Lin, F. Jenney, M. Adams +12 more
2016Inorganic Chemistry15 citations Open access
Semantic Scholar
Vibrational characterization of a diiron bridging hydride complex – a model for hydrogen catalysis
L. Gee, Vladimir Pelmenschikov, Hongxin Wang, Nakul Mishra +5 more
2020Chemical Science13 citations Open access
Semantic Scholar
Sm valence states and magnetic properties in SmBe13 and SmTi2Al20 investigated by Sm synchrotron-radiation-based Mössbauer spectroscopy
S. Tsutsui, Yoshio Kobayashi, J. Nakamura, M. K. Kubo +11 more
201711 citations
Semantic Scholar
Vibrational Perturbation of the [FeFe] Hydrogenase H-Cluster Revealed by 13C2H-ADT Labeling
Vladimir Pelmenschikov, James A. Birrell, L. Gee, C. Richers +11 more
2021Journal of the American Chemical Society10 citations Open access
Semantic Scholar
Synchrotron radiation-based 61Ni Mössbauer spectroscopic study of Li(Ni1/3Mn1/3Co1/3)O2 cathode materials of lithium ion rechargeable battery
T. Segi, R. Masuda, Y. Kobayashi, T. Tsubota +2 more
201610 citations
Semantic Scholar
Observation of a critical charge mode in a strange metal
H. Kobayashi, Y. Sakaguchi, Hayato Kitagawa, Momoko Oura +12 more
2022Science9 citations Open access
Semantic Scholar
Precise determination of hyperfine interactions and second-order doppler shift in 149Sm Mössbauer transition
S. Tsutsui, R. Masuda, Y. Yoda, M. Seto
2018Hyperfine Interactions9 citations
Semantic Scholar
Thickness dependence of Morin transition temperature in iridium-doped hematite layers studied through nuclear resonant scattering
Mi-Bu Ko, K. Mikami, Masaaki A. Tanaka, R. Masuda +2 more
2017Hyperfine Interactions9 citations
Semantic Scholar
Cluster Toroidal Multipoles Formed by Electric-Quadrupole and Magnetic-Octupole Trimers: A Possible Scenario for Hidden Orders in Ca5Ir3O12
S. Hayami, Satoshi Tsutsui, Hiroki Hanate, N. Nagasawa +2 more
2023Journal of the Physical Society of Japan8 citations Open access
Semantic Scholar
High Frequency Fe–H and Fe–H2 Modes in a trans-Fe(η2-H2)(H) Complex – A Speed Record for Nuclear Resonance Vibrational Spectroscopy
Ming-Hsi Chiang, Vladimir Pelmenschikov, L. Gee, Yu-Chiao Liu +6 more
2020Inorganic Chemistry8 citations Open access
Semantic Scholar
Nuclear Resonance Vibrational Spectroscopy Definition of Peroxy Intermediates in Catechol Dioxygenases: Factors that Determine Extra- versus Intradiol Cleavage
Jeffrey T. Babicz, M. Rogers, Dory E. DeWeese, K. Sutherlin +12 more
2023Journal of the American Chemical Society7 citations Open access
Semantic Scholar
Nuclear phase retrieval spectroscopy using resonant x-ray scattering
Ziyang Yuan, Hong-Xia Wang, Zhiwei Li, Tao Wang +13 more
2022Nature Communications7 citations Open access
Semantic Scholar
Microscopic observation of hidden Johari-Goldstein-β process in glycerol.
M. Saito, M. Kurokuzu, Y. Yoda, M. Seto
2022Physical Review E7 citations
Semantic Scholar
NRVS and DFT of MitoNEET – Understanding the Special Vibrational Structure of a [2Fe-2S] Cluster with (Cys)3(His)1 Ligation
L. Gee, Vladimir Pelmenschikov, Cécile Mons, Nakul Mishra +5 more
2021Biochemistry7 citations Open access
Semantic Scholar
Application of synchrotron-radiation-based Mössbauer spectroscopy to 193Ir 73 keV transition
S. Tsutsui, Hiroki Hanate, Y. Yoda, R. Masuda +1 more
2021Hyperfine Interactions7 citations
Semantic Scholar
Measurement of nuclear resonant scattering on 61 Ni with fast scintillation detector using proportional-mode silicon avalanche photodiode
Keisuke Inoue, Y. Kobayashi, Y. Yoda, M. Koshimizu +3 more
20187 citations
Semantic Scholar
Nuclear resonance vibrational spectroscopic definition of peroxy intermediates in non-heme iron sites
K. Sutherlin, L. V. Liu, Yong-Min Lee, Yeonju Kwak +8 more
2016Journal of the American Chemical Society7 citations Open access
Semantic Scholar
Direct Observation of Sm Valence Fluctuation in a Heavy Fermion Compound SmOs4Sb12 via 149Sm Synchrotron-Radiation-Based Mössbauer Spectroscopy
Satoshi Tsutsui, J. Nakamura, Y. Kobayashi, Y. Yoda +5 more
2019Journal of the Physical Society of Japan6 citations
Semantic Scholar
Ice crystal growth under the presence of krypton and methane at low temperature
T. Kawauchi, Y. Yoda, K. Fukutani
20186 citations
Semantic Scholar
A Nuclear Resonance Vibrational Spectroscopic Study of Oxy Myoglobins Reconstituted with Chemically Modified Heme Cofactors: Insights into the Fe-O2 Bonding and Internal Dynamics of the Protein.
T. Ohta, Tomokazu Shibata, Y. Kobayashi, Y. Yoda +5 more
2018Biochemistry6 citations
Semantic Scholar
Effect of silica nanoparticle filler on microscopic polymer α-relaxation dynamics
M. Saito, R. Mashita, H. Kishimoto, R. Masuda +2 more
20176 citations
Semantic Scholar
Absolute X-ray energy measurement using a high-accuracy angle encoder.
T. Masuda, Tsukasa Watanabe, K. Beeks, H. Fujimoto +15 more
2020Journal of Synchrotron Radiation5 citations Open access
Semantic Scholar
New antiferromagnetic order with pressure-induced superconductivity in EuFe2As2
S. Ikeda, Yuu Tsuchiya, Xiao-Wei Zhang, S. Kishimoto +6 more
2018Physical review B5 citations Open access
Semantic Scholar
Valence fluctuating compound α-YbAlB4 studied by 174Yb Mössbauer spectroscopy and X-ray diffraction using synchrotron radiation
Momoko Oura, S. Ikeda, R. Masuda, Y. Kobayashi +9 more
20175 citations
Semantic Scholar
Evolution of synchrotron-radiation-based Mössbauer absorption spectroscopy for various isotopes
M. Seto, R. Masuda, Y. Kobayashi, S. Kitao +7 more
2017Hyperfine Interactions5 citations
Semantic Scholar
Structural correlations of nitrogenase active sites using nuclear resonance vibrational spectroscopy and QM/MM calculations.
C. Van Stappen, Bardi Benediktsson, Atanu Rana, A. Chumakov +5 more
2023Faraday discussions4 citations Open access
Semantic Scholar
Europium-151 and iron-57 nuclear resonant vibrational spectroscopy of natural abundance KEu(III)Fe(II)(CN)6 and Eu(III)Fe(III)(CN)6 complexes
Hongxin Wang, Song-Ping D. Huang, Lifen Yan, Michael H Hu +5 more
2022Dalton Transactions4 citations Open access
Semantic Scholar

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