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F. Antonacci · SciRah

Researcher profile · Semantic Scholar

F. Antonacci

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F. Antonacci — researcher profile on SciRah

h-index: 35
Works: 87
Citations: 8,081

Most-cited papers

Mapping and sequencing of structural variation from eight human genomes
J. Kidd, Gregory M. Cooper, William F. Donahue, H. Hayden +42 more
2008Nature1,211 citations Open access
Semantic Scholar
Personalized Copy-Number and Segmental Duplication Maps using Next-Generation Sequencing
C. Alkan, J. Kidd, T. Marquès-Bonet, Gozde Aksay +9 more
2009Nature Genetics790 citations Open access
Semantic Scholar
Resolving the complexity of the human genome using single-molecule sequencing
M. Chaisson, J. Huddleston, M. Dennis, P. Sudmant +11 more
2014Nature774 citations Open access
Semantic Scholar
Diversity of Human Copy Number Variation and Multicopy Genes
P. Sudmant, J. Kitzman, F. Antonacci, C. Alkan +6 more
2010Science725 citations Open access
Semantic Scholar
A recurrent 16p12.1 microdeletion suggests a two-hit model for severe developmental delay
S. Girirajan, J. Rosenfeld, Gregory M. Cooper, F. Antonacci +55 more
2010Nature Genetics598 citations Open access
Semantic Scholar
Human-specific evolution of novel SRGAP2 genes by incomplete segmental duplication
M. Dennis, X. Nuttle, P. Sudmant, F. Antonacci +12 more
2012Cell412 citations Open access
Semantic Scholar
Reconstructing complex regions of genomes using long-read sequencing technology
J. Huddleston, S. Ranade, M. Malig, F. Antonacci +10 more
2014Genome Research245 citations Open access
Semantic Scholar
Evolutionary Toggling of the MAPT 17q21.31 Inversion Region
M. Zody, Zhaoshi Jiang, Hon C. Fung, F. Antonacci +16 more
2008Nature Genetics226 citations Open access
Semantic Scholar
Evolution and diversity of copy number variation in the great ape lineage
P. Sudmant, J. Huddleston, C. Catacchio, M. Malig +11 more
2013Genome Research190 citations Open access
Semantic Scholar
Structural Diversity and African Origin of the 17q21.31 Inversion Polymorphism
K. Steinberg, F. Antonacci, P. Sudmant, J. Kidd +15 more
2012Nature Genetics171 citations Open access
Semantic Scholar
The evolution and population diversity of human-specific segmental duplications
M. Dennis, Lana Harshman, Bradley J. Nelson, O. Penn +17 more
2017Nature Ecology &Evolution167 citations Open access
Semantic Scholar
Programmed loss of millions of base pairs from a vertebrate genome
J. Smith, F. Antonacci, E. Eichler, C. Amemiya
2009Proceedings of the National Academy of Sciences of the United States of America167 citations Open access
Semantic Scholar
Evolutionary Formation of New Centromeres in Macaque
M. Ventura, F. Antonacci, M. F. Cardone, R. Stanyon +6 more
2007Science152 citations Open access
Semantic Scholar
Complete sequencing of ape genomes
DongAhn Yoo, A. Rhie, Prajna Hebbar, F. Antonacci +119 more
2024bioRxiv151 citations Open access
Semantic Scholar
Characterization of Missing Human Genome Sequences and Copy-number Polymorphic Insertions
J. Kidd, N. Sampas, F. Antonacci, T. Graves +15 more
2010Nature Methods150 citations Open access
Semantic Scholar
Recurrent inversion polymorphisms in humans associate with genetic instability and genomic disorders
D. Porubsky, Wolfram Höps, Hufsah Ashraf, Ping-Hsun Hsieh +21 more
2022Cell149 citations Open access
Semantic Scholar
Sequence diversity analyses of an improved rhesus macaque genome enhances its biomedical utility
W. Warren, R. Harris, Marina Haukness, Ian T. Fiddes +56 more
2020Science149 citations Open access
Semantic Scholar
Characterization of six human disease-associated inversion polymorphisms
F. Antonacci, J. Kidd, T. Marquès-Bonet, M. Ventura +3 more
2009Human Molecular Genetics132 citations Open access
Semantic Scholar
Emergence of a Homo sapiens-specific gene family and chromosome 16p11.2 CNV susceptibility
X. Nuttle, G. Giannuzzi, Michael H. Duyzend, J. Schraiber +26 more
2016Nature130 citations Open access
Semantic Scholar
Death and Resurrection of the Human IRGM Gene
C. Bekpen, T. Marquès-Bonet, C. Alkan, F. Antonacci +6 more
2009PLoS Genetics129 citations Open access
Semantic Scholar
Autosomal Dominant Familial Dyskinesia and Facial Myokymia: Single Exome Sequencing Identifies a Mutation in Adenylate Cyclase 5
Ying-Zhang Chen, M. Matsushita, P. Robertson, M. Rieder +7 more
2012Archives of Neurology120 citations Open access
Semantic Scholar
Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability
F. Antonacci, M. Dennis, J. Huddleston, P. Sudmant +15 more
2014Nature Genetics107 citations Open access
Semantic Scholar
A large, complex structural polymorphism at 16p12.1 underlies microdeletion disease risk
F. Antonacci, J. Kidd, T. Marquès-Bonet, Brian Teague +13 more
2010Nature Genetics102 citations Open access
Semantic Scholar
Genome-wide characterization of centromeric satellites from multiple mammalian genomes.
C. Alkan, M. F. Cardone, C. Catacchio, F. Antonacci +7 more
2011Genome Research98 citations Open access
Semantic Scholar
Copy number variation analysis in single suture craniosynostosis: multiple rare variants including RUNX2 duplication in two cousins with metopic craniosynostosis
H. Mefford, Neil Shafer, F. Antonacci, J. Tsai +7 more
2010American Journal of Medical Genetics. Part A83 citations Open access
Semantic Scholar
Adaptive archaic introgression of copy number variants and the discovery of previously unknown human genes
Ping-Hsun Hsieh, M. Vollger, Vy Dang, D. Porubsky +16 more
2019Science78 citations Open access
Semantic Scholar
Recurrent inversion toggling and great ape genome evolution
D. Porubsky, A. Sanders, Wolfram Höps, Ping-Hsun Hsieh +13 more
2020Nature Genetics63 citations Open access
Semantic Scholar
A high-quality bonobo genome refines the analysis of hominid evolution
Ya-Fei Mao, C. Catacchio, L. Hillier, D. Porubsky +35 more
2021Nature61 citations Open access
Semantic Scholar
The complete sequence and comparative analysis of ape sex chromosomes
Kateryna D. Makova, Brandon D. Pickett, Robert S. Harris, Gabrielle Hartley +80 more
2024Nature54 citations Open access
Semantic Scholar
New insights into centromere organization and evolution from the white-cheeked gibbon and marmoset.
A. Cellamare, C. Catacchio, C. Alkan, G. Giannuzzi +7 more
2009Molecular biology and evolution50 citations Open access
Semantic Scholar
The birth of a human-specific neural gene by incomplete duplication and gene fusion
Max L. Dougherty, X. Nuttle, O. Penn, Bradley J. Nelson +9 more
2017Genome Biology48 citations Open access
Semantic Scholar
The Complete Sequence and Comparative Analysis of Ape Sex Chromosomes
Kateryna D. Makova, Brandon D. Pickett, Robert S. Harris, Gabrielle Hartley +79 more
2023bioRxiv44 citations Open access
Semantic Scholar
Identification of a novel recurrent 1q42.2‐1qter deletion in high risk MYCN single copy 11q deleted neuroblastomas
A. Fieuw, C. Kumps, A. Schramm, F. Pattyn +15 more
2012International Journal of Cancer43 citations
Semantic Scholar
Integrated analysis of the complete sequence of a macaque genome
Shilong Zhang, Ning Xu, Lianting Fu, Xiang-Yu Yang +34 more
2025Nature38 citations Open access
Semantic Scholar
Inversion variants in human and primate genomes
C. Catacchio, F. A. M. Maggiolini, Pietro D 'addabbo, Miriana Bitonto +7 more
2018Genome Research37 citations Open access
Semantic Scholar
Discovery of large genomic inversions using long range information
Marzieh Eslami Rasekh, Giorgia Chiatante, M. Miroballo, Joyce Tang +5 more
2017BMC Genomics27 citations Open access
Semantic Scholar
Unusual 8p inverted duplication deletion with telomere capture from 8q.
K. Buysse, F. Antonacci, B. Callewaert, B. Loeys +5 more
2009European Journal of Medical Genetics27 citations Open access
Semantic Scholar
Identification of 2 putative critical segments of 17q gain in neuroblastoma through integrative genomics
J. Vandesompele, E. Michels, K. De Preter, B. Menten +10 more
2007International Journal of Cancer27 citations Open access
Semantic Scholar
Genomic inversions and GOLGA core duplicons underlie disease instability at the 15q25 locus
F. A. M. Maggiolini, Stuart Cantsilieris, Pietro D 'addabbo, Michele Manganelli +11 more
2019PLoS Genetics22 citations Open access
Semantic Scholar
Lineage-specific evolution of the vertebrate Otopetrin gene family revealed by comparative genomic analyses
Belén Hurlé, T. Marquès-Bonet, F. Antonacci, Inna Hughes +5 more
2011BMC Evolutionary Biology19 citations Open access
Semantic Scholar
Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution
F. A. M. Maggiolini, A. Sanders, Colin J. Shew, Arvis Sulovari +14 more
2020Genome Research17 citations Open access
Semantic Scholar
Hominoid fission of chromosome 14/15 and the role of segmental duplications
G. Giannuzzi, M. Pazienza, J. Huddleston, F. Antonacci +4 more
2013Genome Research15 citations Open access
Semantic Scholar
Mapping of 5q35 chromosomal rearrangements within a genomically unstable region
K. Buysse, A. Crepel, B. Menten, F. Pattyn +9 more
2008Journal of Medical Genetics11 citations
Semantic Scholar
Comparative genomics of macaques and integrated insights into genetic variation and population history
Shilong Zhang, Ning Xu, Lianting Fu, Xiang-Yu Yang +32 more
2024bioRxiv10 citations Open access
Semantic Scholar
Rapid and accurate large-scale genotyping of duplicated genes and discovery of novel sites of interlocus gene conversion
X. Nuttle, J. Huddleston, B. O'Roak, F. Antonacci +4 more
2013Nature Methods10 citations Open access
Semantic Scholar
Evolutionary Dynamics of the POTE Gene Family in Human and Nonhuman Primates
F. A. M. Maggiolini, L. Mercuri, F. Antonacci, Fabio Anaclerio +8 more
2020Genes9 citations Open access
Semantic Scholar
Haplotype-resolved inversion landscape reveals hotspots of mutational recurrence associated with genomic disorders
D. Porubsky, Wolfram Höps, Hufsah Ashraf, Ping-Hsun Hsieh +21 more
2021bioRxiv8 citations Open access
Semantic Scholar
Genetic diversity and regulatory features of human-specific NOTCH2NL duplications
Taylor Real, Prajna Hebbar, DongAhn Yoo, F. Antonacci +18 more
2025bioRxiv5 citations Open access
Semantic Scholar
A high-resolution map of small-scale inversions in the gibbon genome
L. Mercuri, Donato Palmisano, A. L'Abbate, Pietro D 'addabbo +8 more
2022Genome Research5 citations Open access
Semantic Scholar
Beyond Evil and Good in Online Gaming. An Analysis of Violence in ‘Overwatch’ Between Demonization and Proactive Values
Enrico Gandolfi, F. Antonacci
20205 citations Open access
Semantic Scholar

Frequent co-authors

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E. Eichler×35
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E. Eichler — researcher profile on SciRah
M. Ventura×21
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M. Ventura — researcher profile on SciRah
M. Malig×15
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M. Malig — researcher profile on SciRah
C. Alkan×10
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C. Alkan — researcher profile on SciRah

×9

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J. Kidd — researcher profile on SciRah

J. Huddleston×9

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J. Huddleston — researcher profile on SciRah

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P. Sudmant — researcher profile on SciRah

C. Catacchio×9

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C. Catacchio — researcher profile on SciRah

Richard K. Wilson×8

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Richard K. Wilson — researcher profile on SciRah

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C. Baker — researcher profile on SciRah

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E. Eichler — researcher profile on SciRah

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D. Porubsky — researcher profile on SciRah