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Cai Li · SciRah

Researcher profile · Semantic Scholar

Cai Li

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Cai Li — researcher profile on SciRah

h-index: 31
Works: 48
Citations: 7,063

Most-cited papers

Whole-genome analyses resolve early branches in the tree of life of modern birds
E. Jarvis, S. Mirarab, A. Aberer, Bo Li +101 more
2014Science1,818 citations Open access
Semantic Scholar
Comparative genomics reveals insights into avian genome evolution and adaptation
Guojie Zhang, Cai Li, Qi-Ye Li, Bo Li +102 more
2014Science989 citations Open access
Semantic Scholar
Genomic Comparison of the Ants Camponotus floridanus and Harpegnathos saltator
Roberto Bonasio, Guo-Jie Zhang, Chao-Yang Ye, N. Mutti +12 more
2010Science465 citations Open access
Semantic Scholar
Genomic signatures of evolutionary transitions from solitary to group living
K. Kapheim, Hai-Lin Pan, Cai Li, S. Salzberg +48 more
2015Science410 citations Open access
Semantic Scholar
Molecular traces of alternative social organization in a termite genome
N. Terrapon, Cai Li, H. M. Robertson, Lu Ji +39 more
2014Nature Communications367 citations Open access
Semantic Scholar
Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques
Guang-Mei Yan, Guo-Jie Zhang, Xiao-Dong Fang, Yan-Feng Zhang +42 more
2011Nature Biotechnology304 citations Open access
Semantic Scholar
Genomic diversity and evolution of the head crest in the rock pigeon
M. Shapiro, Z. Kronenberg, Cai Li, Eric T. Domyan +14 more
2013Science276 citations Open access
Semantic Scholar
Complementary symbiont contributions to plant decomposition in a fungus-farming termite
M. Poulsen, Hao-Fu Hu, Cai Li, Zhensheng Chen +20 more
2014Proceedings of the National Academy of Sciences of the United States of America262 citations Open access
Semantic Scholar
Temporal Dynamics of Avian Populations during Pleistocene Revealed by Whole-Genome Sequences
K. Nadachowska-Brzyska, Cai Li, L. Smeds, Guo-Jie Zhang +1 more
2015Current Biology258 citations Open access
Semantic Scholar
The genome of the clonal raider ant Cerapachys biroi
Peter R. Oxley, Lu Ji, I. Fetter-Pruneda, S. McKenzie +4 more
2014Current Biology168 citations Open access
Semantic Scholar
farming suggests key adaptations to advanced social life and fungus Acromyrmex echinatior The genome of the leaf-cutting ant Material Supplemental
S. Nygaard, Guo-Jie Zhang, M. Schiøtt, Cai Li +12 more
2011152 citations
Semantic Scholar
Universitet The Genomic Footprints of the Fall and Recovery of the Crested Ibis
Shaohong Feng, Qi Fang, Ross Barnett, Cai Li +12 more
2019150 citations
Semantic Scholar
Comparative genomic data of the Avian Phylogenomics Project
Guo-Jie Zhang, Bo Li, Cai Li, M. Gilbert +3 more
2014GigaScience136 citations Open access
Semantic Scholar
Reciprocal genomic evolution in the ant–fungus agricultural symbiosis
S. Nygaard, Hao-Fu Hu, Cai Li, M. Schiøtt +13 more
2016Nature Communications134 citations Open access
Semantic Scholar
Incomplete lineage sorting and phenotypic evolution in marsupials
Shaohong Feng, M. Bai, Iker Rivas-González, Cai Li +19 more
2022Cell125 citations Open access
Semantic Scholar
Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles
Matthew J. Greenwold, Weier Bao, E. Jarvis, Hao-Fu Hu +4 more
2014BMC Evolutionary Biology103 citations Open access
Semantic Scholar
Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida.
Imran Khan, Zhikai Yang, Emanuel Maldonado, Cai Li +6 more
2015Molecular biology and evolution98 citations Open access
Semantic Scholar
Phylogenomic analyses data of the avian phylogenomics project
Erich D. Jarvis, S. Mirarab, A. Aberer, Bo Li +24 more
2015GigaScience94 citations Open access
Semantic Scholar
The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes
Sarah D. Kocher, Cai Li, Wei Yang, Hao Tan +6 more
2013Genome Biology92 citations Open access
Semantic Scholar
Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features
R. Seki, Cai Li, Qi Fang, Shinichi Hayashi +18 more
2017Nature Communications88 citations Open access
Semantic Scholar
Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment
Cai Li, Yong Zhang, Jian-Wen Li, Lesheng Kong +37 more
2014GigaScience85 citations Open access
Semantic Scholar
A genomic comparison of two termites with different social complexity
J. Korb, M. Poulsen, Hao-Fu Hu, Cai Li +3 more
2015Frontiers in Genetics66 citations Open access
Semantic Scholar
Novel Insights into Chromosome Evolution in Birds, Archosaurs, and Reptiles
Marta Farré, Jitendra Narayan, G. Slavov, Joana Damas +6 more
2016Genome Biology and Evolution62 citations Open access
Semantic Scholar
Developmental plasticity shapes social traits and selection in a facultatively eusocial bee
Karen M. Kapheim, Beryl M. Jones, Hai-Lin Pan, Cai Li +11 more
2020Proceedings of the National Academy of Sciences of the United States of America55 citations Open access
Semantic Scholar
A soft selective sweep during rapid evolution of gentle behaviour in an Africanized honeybee
A. Avalos, Hai-Lin Pan, Cai Li, Jenny P. Acevedo-Gonzalez +7 more
2017Nature Communications53 citations Open access
Semantic Scholar
Draft genome of the leopard gecko, Eublepharis macularius
Zi-Jun Xiong, Fang Li, Qi-Ye Li, Long Zhou +7 more
2016GigaScience51 citations Open access
Semantic Scholar
The genome of the largest bony fish, ocean sunfish (Mola mola), provides insights into its fast growth rate
Hai-Lin Pan, Hao Yu, V. Ravi, Cai Li +8 more
2016GigaScience40 citations Open access
Semantic Scholar
Avianbase: a community resource for bird genomics
L. Eory, M. T. P. Gilbert, Cai Li, Bo Li +6 more
2015Genome Biology36 citations Open access
Semantic Scholar
Comparative genomics reveals insights into avian genome evolution and adaptation
Guo-Jie Zhang, Cai Li, Qi-Ye Li, B. Li +115 more
201435 citations
Semantic Scholar
The Nuclear and Mitochondrial Genomes of the Facultatively Eusocial Orchid Bee Euglossa dilemma
P. Brand, N. Saleh, Hai-Lin Pan, Cai Li +2 more
2017G3: Genes, Genomes, Genetics33 citations Open access
Semantic Scholar
Improving the ostrich genome assembly using optical mapping data
Jilin Zhang, Cai Li, Qi Zhou, Guo-Jie Zhang
2015GigaScience32 citations Open access
Semantic Scholar
Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: Nomia melanderi)
K. Kapheim, Hai-Lin Pan, Cai Li, Charles A. Blatti +11 more
2018G3: Genes, Genomes, Genetics23 citations Open access
Semantic Scholar
Comparative Genomics Across Modern Bird Species Reveal Insights into Pan- avian Genome evolution and Trait Biodiversity
Guo-Jie Zhang, Cai Li, Qi-Ye Li, Bo Li +57 more
20147 citations
Semantic Scholar
The Genomic Footprints of the Fall and Recovery of the Crested Ibis
Shaohong Feng, Qi Fang, Ross Barnett, Cai Li +12 more
2019Current Biology6 citations Open access
Semantic Scholar
Erratum to: The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes
Sarah D. Kocher, Cai Li, Wei Yang, Hao Tan +6 more
2015Genome Biology3 citations Open access
Semantic Scholar
Omics analysis reveals key genes mediating herbicide resistance in Digitaria sanguinalis.
Yidi Guan, Liru Liu, Zhi Xiong, Cai Li +3 more
2025Pesticide Biochemistry and Physiology2 citations Open access
Semantic Scholar
Pigeon Genomic Diversity and Evolution of the Head Crest in the Rock
M. Shapiro, Z. Kronenberg, Cai Li, Eric T. Domyan +14 more
20132 citations
Semantic Scholar
Universitet Draft Genome Assembly and Population Genetics of an Agricultural Pollinator , the Solitary Alkali Bee ( Halictidae : Nomia melanderi )
K. Kapheim, Hai-Lin Pan, Cai Li, Charles A. Blatti +10 more
20191 citations
Semantic Scholar
LSU Digital LSU Whole-genome analyses resolve early branches in the tree of life Whole-genome analyses resolve early branches in the tree of life of modern birds of modern birds
Erich D. Jarvis, S. Mirarab, A. Aberer, Bo Li +82 more
20210 citations
Semantic Scholar
Supplemental Material for Kapheim et al., 2018
K. Kapheim, Hai-Lin Pan, Cai Li, Charles A. Blatti +11 more
20180 citations
Semantic Scholar
Comparative genomics of the attine fungus-growing ants
S. Nygaard, Zhensheng Chen, M. Schiøtt, S. Brady +7 more
20140 citations
Semantic Scholar
Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles
Matthew J. Greenwold, Weier Bao, E. Jarvis, Hao-Fu Hu +4 more
2014BMC Evolutionary Biology0 citations Open access
Semantic Scholar
The functional implications of Termitomyces domestication on fungus-growing termite gut microbiomes
M. Poulsen, Hao-Fu Hu, Cai Li, S. Otani +3 more
20140 citations
Semantic Scholar
Genomic data of the green sea turtle (Chelonia mydas)
Zhuo Wang, Juan Pascual-Anaya, A. Zadissa, Wen-Qi Li +28 more
20140 citations
Semantic Scholar
Genomic signatures of social evolution in bees
K. Kapheim, Cai Li, Hai-Lin Pan, Guo-Jie Zhang +1 more
20140 citations
Semantic Scholar
Genomic basis of a social polymorphism in a halictid bee
Sarah D. Kocher, Cai Li, H. Hoekstra, Guo-Jie Zhang +2 more
20140 citations
Semantic Scholar
Parrenin Temperature During the Last Deglacial Warming and Antarctic 2 Synchronous Change of Atmospheric CO
Z. Kronenberg, Cai Li, Eric T. Domyan, Hai-Lin Pan +12 more
20130 citations
Semantic Scholar
Cynomolgus and Chinese rhesus macaque genome assembly and analysis
Zhi-Yong Huang, Guang-Mei Yan, Jun Wang, Xiaoning Wang +5 more
20110 citations Open access
Semantic Scholar

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