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L. Clark · SciRah

Researcher profile · Semantic Scholar

L. Clark

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L. Clark — researcher profile on SciRah

h-index: 19
Works: 57
Citations: 1,717

Most-cited papers

polysat: an R package for polyploid microsatellite analysis
L. Clark, M. Jasieniuk
2011Molecular Ecology Resources477 citations
Semantic Scholar
Breeding progress and preparedness for mass‐scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar
J. Clifton-Brown, A. Harfouche, M. Casler, Huw Dylan Jones +55 more
2018Global change biology. Bioenergy145 citations Open access
Semantic Scholar
polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids
L. Clark, A. Lipka, E. Sacks
2018G3: Genes, Genomes, Genetics110 citations Open access
Semantic Scholar
Genome biology of the paleotetraploid perennial biomass crop Miscanthus
T. Mitros, Adam M. Session, Brandon T James, G. Wu +38 more
2020Nature Communications109 citations Open access
Semantic Scholar
A footprint of past climate change on the diversity and population structure of Miscanthus sinensis.
L. Clark, J. Brummer, K. Głowacka, M. Hall +8 more
2014Annals of Botany105 citations Open access
Semantic Scholar
Genetic structure of Miscanthus sinensis and Miscanthus sacchariflorus in Japan indicates a gradient of bidirectional but asymmetric introgression
L. Clark, J. Stewart, A. Nishiwaki, Y. Toma +9 more
2015Journal of Experimental Botany83 citations Open access
Semantic Scholar
Genetic variation in Miscanthus × giganteus and the importance of estimating genetic distance thresholds for differentiating clones
K. Głowacka, L. Clark, S. Adhikari, Jun-Hua Peng +8 more
201582 citations Open access
Semantic Scholar
Resolving microsatellite genotype ambiguity in populations of allopolyploid and diploidized autopolyploid organisms using negative correlations between allelic variables
L. Clark, A. Schreier
2015bioRxiv50 citations Open access
Semantic Scholar
Population structure of Miscanthus sacchariflorus reveals two major polyploidization events, tetraploid-mediated unidirectional introgression from diploid M. sinensis, and diversity centred around the Yellow Sea.
L. Clark, Xiaoli Jin, K. K. Petersen, Kossanou G. Anzoua +17 more
2018Annals of Botany41 citations Open access
Semantic Scholar
Mapping of Photoperiod-induced Growth Cessation in the Wild Grape Vitis riparia
Amanda J. Garris, L. Clark, C. Owens, S. McKay +3 more
200936 citations Open access
Semantic Scholar
Ecological characteristics and in situ genetic associations for yield-component traits of wild Miscanthus from eastern Russia.
L. Clark, E. Dzyubenko, N. Dzyubenko, Larisa Bagmet +14 more
2016Annals of Botany35 citations Open access
Semantic Scholar
Genetic mapping of biomass yield in three interconnected Miscanthus populations
Hongxu Dong, Siyao Liu, L. Clark, S. Sharma +4 more
201834 citations Open access
Semantic Scholar
Training Population Optimization for Genomic Selection in Miscanthus
Marcus O. Olatoye, L. Clark, N. LaBonte, Hongxu Dong +21 more
2020G332 citations Open access
Semantic Scholar
Origins and distribution of invasive Rubus fruticosus L. agg. (Rosaceae) clones in the Western United States
L. Clark, K. Evans, M. Jasieniuk
2013Biological Invasions31 citations
Semantic Scholar
Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential
L. Clark, M. S. Dwiyanti, K. Anzoua, J. Brummer +13 more
2019GCB Bioenergy30 citations Open access
Semantic Scholar
Evaluation of genomic selection and marker-assisted selection in Miscanthus and energycane
Marcus O. Olatoye, L. Clark, Jian-Ping Wang, Xi-Ping Yang +3 more
2019Molecular breeding27 citations Open access
Semantic Scholar
Transcriptomic and Epigenomic Dynamics of Honey Bees in Response to Lethal Viral Infection
Hongmei Li-Byarlay, H. Boncristiani, Gary Howell, Jacob J. Herman +4 more
2020bioRxiv23 citations Open access
Semantic Scholar
High‐density genetic map of Miscanthus sinensis reveals inheritance of zebra stripe
Siyao Liu, L. Clark, K. Swaminathan, J. Gifford +2 more
201620 citations Open access
Semantic Scholar
CRISPR base editing of cis-regulatory elements enables the perturbation of neurodegeneration-linked genes.
C. K. Lim, Tristan X McCallister, Christian Saporito-Magriña, Garrett D McPheron +6 more
2022Molecular Therapy19 citations Open access
Semantic Scholar
Spontaneous hybrids between native and exotic Rubus in the Western United States produce offspring both by apomixis and by sexual recombination
L. Clark, M. Jasieniuk
2012Heredity19 citations Open access
Semantic Scholar
A population-level statistic for assessing Mendelian behavior of genotyping-by-sequencing data from highly duplicated genomes
L. Clark, Wittney D. Mays, A. Lipka, E. Sacks
2020BMC Bioinformatics18 citations Open access
Semantic Scholar
Concordance of Immune-Related Markers in Lymphocytes and Prefrontal Cortex in Schizophrenia
Eleonora Gatta, V. Saudagar, J. Drnevich, Marc P. Forrest +7 more
2021Schizophrenia Bulletin Open17 citations Open access
Semantic Scholar
Establishment of Miscanthus sinensis with decreased lignin biosynthesis by Agrobacterium–mediated transformation using antisense COMT gene
J. Yoo, E. Seong, B. Ghimire, Kweon Heo +5 more
2018Plant Cell Tissue and Organ Culture17 citations
Semantic Scholar
Genome‐wide association and genomic prediction for biomass yield in a genetically diverse Miscanthus sinensis germplasm panel phenotyped at five locations in Asia and North America
L. Clark, M. S. Dwiyanti, K. Anzoua, J. Brummer +13 more
2019GCB Bioenergy16 citations Open access
Semantic Scholar
Managing flowering time in Miscanthus and sugarcane to facilitate intra- and intergeneric crosses
Hongxu Dong, L. Clark, Xiaoli Jin, K. Anzoua +16 more
2020bioRxiv15 citations Open access
Semantic Scholar
Winter hardiness of Miscanthus (II): Genetic mapping for overwintering ability and adaptation traits in three interconnected Miscanthus populations
Hongxu Dong, Siyao Liu, L. Clark, S. Sharma +4 more
2019GCB Bioenergy14 citations Open access
Semantic Scholar
Biomass yield in a genetically diverse Miscanthus sacchariflorus germplasm panel phenotyped at five locations in Asia, North America, and Europe
J. Njuguna, L. Clark, K. Anzoua, Larisa Bagmet +20 more
2023GCB Bioenergy13 citations Open access
Semantic Scholar
TagDigger: user-friendly extraction of read counts from GBS and RAD-seq data
L. Clark, E. Sacks
2016Source Code for Biology and Medicine13 citations Open access
Semantic Scholar
Differential DNA methylation associated with multiple sclerosis and disease modifying treatments in an underrepresented minority population
Jeremy M. Bingen, L. Clark, M. Band, Ilyas Munzir +1 more
2023Frontiers in Genetics12 citations Open access
Semantic Scholar
Genome-wide association analysis for emergence of deeply sown rice (Oryza sativa) reveals novel aus-specific phytohormone candidate genes for adaptation to dry-direct seeding in the field
S. Sakhale, S. Yadav, L. Clark, A. Lipka +2 more
2023Frontiers in Plant Science11 citations Open access
Semantic Scholar
H3AGWAS: a portable workflow for genome wide association studies
Jean-Tristan Brandenburg, L. Clark, G. Botha, Sumir Panji +3 more
2022bioRxiv10 citations Open access
Semantic Scholar
Winter hardiness of Miscanthus (III): Genome‐wide association and genomic prediction for overwintering ability in Miscanthus sinensis
Hongxu Dong, L. Clark, A. Lipka, J. Brummer +12 more
2019GCB Bioenergy10 citations Open access
Semantic Scholar
Genome‐wide association and genomic prediction for yield and component traits of Miscanthus sacchariflorus
Joyce N. Njuguna, L. Clark, A. Lipka, K. Anzoua +19 more
2023GCB Bioenergy9 citations Open access
Semantic Scholar
Effects of a mildly-cooked human-grade dog diet on gene expression, skin and coat health measures, and fecal microbiota of healthy adult dogs.
Elizabeth L. Geary, P. Oba, Catherine C. Applegate, L. Clark +2 more
2022Journal of Animal Science9 citations Open access
Semantic Scholar
Characterizing a Miscanthus Germplasm Collection for Yield, Yield Components, and Genotype × Environment Interactions
Christopher M. Kaiser, L. Clark, J. Juvik, T. Voigt +1 more
20159 citations
Semantic Scholar
Miscanthus sinensis multi-location trial: phenotypic analysis, genome-wide association, and genomic prediction
L. Clark, M. S. Dwiyanti, K. Anzoua, J. Brummer +13 more
20186 citations
Semantic Scholar
Isolation of DiNP-Degrading Microbes from the Mouse Colon and the Influence DiNP Exposure Has on the Microbiota, Intestinal Integrity, and Immune Status of the Colon
Karen K Chiu, S. Bashir, A. Abdel-Hamid, L. Clark +4 more
2022Toxics5 citations Open access
Semantic Scholar
Contrasting allelic distribution of CO/Hd1 homologues in Miscanthus sinensis from the East Asian mainland and the Japanese archipelago
H. Nagano, L. Clark, Hua Zhao, Jun-Hua Peng +7 more
2015Journal of Experimental Botany4 citations Open access
Semantic Scholar
112 Modulating Effects of Miscanthus Grass and Prebiotic Blends on Canine Fecal Microbiota, Metabolites, and Digestibility
Shannon E Finet, F. He, L. Clark, M. D. de Godoy
2021Journal of Animal Science2 citations Open access
Semantic Scholar
Genetic Structure of Miscanthus sinensis from Asia and the United States
L. Clark
20132 citations
Semantic Scholar
Origins and distribution of invasive Rubus fruticosus L. agg. (Rosaceae) clones in the Western United States
L. Clark, K. Evans, M. Jasieniuk
2012Biological Invasions2 citations
Semantic Scholar
Characterization of the Ghd8 Flowering Time Gene in a Mini-Core Collection of Miscanthus sinensis
Zhi-Li Guo, Mei-lan Xu, H. Nagano, L. Clark +2 more
2021Genes1 citations Open access
Semantic Scholar
Genome-Wide Association Analysis of Flowering Time in Miscanthus sinensis
L. Clark
20151 citations
Semantic Scholar
Ecological Genetics of the Apomictic Rubus Invasion in the Western United States
L. Clark
20111 citations
Semantic Scholar
A dysfunctional IL-10-producing memory CD8+ T cell population is associated with severe CAR-T neurotoxicity
Katelyn Burleigh, Neerja Katiyar, L. Clark, Kelly G. Stratton +9 more
2026Blood Immunology & Cellular Therapy0 citations Open access
Semantic Scholar
CRISPR base editing of cis-regulatory elements enables target gene perturbations
C. K. Lim, Tristan X McCallister, Christian Saporito-Magriña, Garrett D McPheron +6 more
2022bioRxiv0 citations Open access
Semantic Scholar
Dataset for evaluating the Hind/He statistic in polyRAD
L. Clark, Wittney D. Mays, A. Lipka, E. Sacks
20210 citations
Semantic Scholar
Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids [R package polyRAD version 1.2]
L. Clark
20200 citations
Semantic Scholar
RAD-seq genotypes for a Miscanthus sacchariflorus diversity panel
L. Clark, J. Njuguna, Xiaoli Jin, K. K. Petersen +18 more
20200 citations
Semantic Scholar
RAD-seq genotypes for a Miscanthus sinensis diversity panel
L. Clark, M. S. Dwiyanti, K. Anzoua, J. Brummer +12 more
20190 citations
Semantic Scholar

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