T. Haryoko

Most-cited papers

1. Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird‐of‐paradise

   Valentina Peona, M. Blom, Luohao Xu, R. Burri +8 more

   2020Molecular Ecology Resources141 citations Open access

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2. The avian W chromosome is a refugium for endogenous retroviruses with likely effects on female-biased mutational load and genetic incompatibilities

   Valentina Peona, O. M. Palacios-Gimenez, J. Blommaert, Jing Liu +6 more

   2020bioRxiv96 citations Open access

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3. A new synthesis of the molecular systematics and biogeography of honeyeaters (Passeriformes: Meliphagidae) highlights biogeographical and ecological complexity of a spectacular avian radiation

   L. Joseph, A. Toon, Árpád S. Nyári, N. Wayne Longmore +4 more

   201461 citations

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4. Specimen collection is essential for modern science

   M. Nachman, Elizabeth J. Beckman, Rauri C. K. Bowie, C. Cicero +115 more

   2023PLoS Biology54 citations Open access

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5. Wild Goffin's cockatoos flexibly manufacture and use tool sets.

   M. O'Hara, B. Mioduszewska, R. Mundry, Yohanna +5 more

   2021Current Biology45 citations Open access

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6. Extraction without tooling around — The first comprehensive description of the foraging- and socio-ecology of wild Goffin’s cockatoos (Cacatua goffiniana)

   M. O'Hara, B. Mioduszewska, T. Haryoko, D. Prawiradilaga +2 more

   2019Behaviour42 citations Open access

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7. Complex histories of gene flow and a mitochondrial capture event in a nonsister pair of birds

   Michael J. Andersen, J. McCullough, Ethan F. Gyllenhaal, X. Mapel +3 more

   2021Molecular Ecology40 citations Open access

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8. The formation of avian montane diversity across barriers and along elevational gradients

   J. Pujolar, M. Blom, A. H. Reeve, Jonathan D. Kennedy +12 more

   2022Nature Communications37 citations Open access

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9. Diversification and community assembly of the world’s largest tropical island

   Jonathan D. Kennedy, P. Z. Marki, A. H. Reeve, M. Blom +7 more

   2022Global Ecology and Biogeography23 citations Open access

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10. Notes on ecology of wild goffin’s cockatoo in the late dry season with emphasis on feeding ecology

    B. Mioduszewska, M. O'Hara, T. Haryoko, A. Auersperg +2 more

    2019TREUBIA19 citations Open access

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11. Phylogenomics of white-eyes, a ‘great speciator’, reveals Indonesian archipelago as the center of lineage diversity

    Chyi Yin Gwee, Kritika M. Garg, B. Chattopadhyay, Keren R. Sadanandan +15 more

    2020eLife16 citations Open access

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12. Geography and elevation as drivers of cloacal microbiome assemblages of a passerine bird distributed across Sulawesi, Indonesia

    Rachael L. Joakim, Mohammad Irham, T. Haryoko, K. Rowe +6 more

    2022Animal Microbiome14 citations Open access

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13. A new species of masked-owl (Aves: Strigiformes: Tytonidae) from Seram, Indonesia.

    K. Jønsson, M. Poulsen, T. Haryoko, A. H. Reeve +1 more

    2013Zootaxa11 citations Open access

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14. Population genomics of the island thrush elucidates one of earth’s great archipelagic radiations

    A. H. Reeve, Graham Gower, J. Pujolar, B. Smith +10 more

    2022bioRxiv9 citations Open access

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15. Preliminary assessment of community composition and phylogeographic relationships of the birds of the Meratus Mountains, south-east borneo, Indonesia

    Subir B. Shakya, T. Haryoko, R. Burner, D. Prawiradilaga +1 more

    2018Bulletin of the British Ornithologists' Club7 citations Open access

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16. New ornithological records from Buru and Seram , south Maluku , Indonesia , 1995 – 2012

    A. H. Reeve, T. Haryoko, M. Poulsen, P. Fabre +1 more

    5 citations

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17. Description of two new bird species from the Meratus Mountains of southeast Borneo, Indonesia

    Mohammad Irham, T. Haryoko, Subir B. Shakya, Simon L. Mitchell +7 more

    20224 citations

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18. The formation of the Indo-Pacific montane avifauna

    A. H. Reeve, Jonathan D. Kennedy, J. Pujolar, Bent Petersen +7 more

    2022bioRxiv4 citations Open access

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19. Genomic investigation of colour polymorphism and phylogeographic variation among populations of black‐headed bulbul (Brachypodius atriceps) in insular southeast Asia

    Subir B. Shakya, T. Haryoko, Mohammad Irham, Suparno +2 more

    2021Molecular Ecology4 citations Open access

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20. Observations on the relationships of some Sundaic passerine taxa (Aves: Passeriformes) previously unavailable for molecular phylogenetic study

    Subir B. Shakya, Mohammad Irham, Matthew L. Brady, T. Haryoko +7 more

    2020Journal of Ornithology4 citations

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21. Ornithological observations from Maratua and Bawean Islands, Indonesia

    R. Burner, Subir B. Shakya, T. Haryoko, Mohammad Irham +2 more

    2019TREUBIA4 citations Open access

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22. Komposisi Jenis Dan Jumlah Burung Liar Yang Diperdagangkan Dijawa Barat [Species Composition and Number of Wild Birds Traded in West Java]

    T. Haryoko

    20104 citations

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23. Bird Diversity on Tanimbar Islands with Special Reference to the Tanimbar Corella (Cacatua goffiniana)

    T. Haryoko, M. O'Hara, B. Mioduszewska, Mohammad Irham +4 more

    2021Proceedings of the International Seminar on Promoting Local Resources for Sustainable Agriculture and Development (ISPLRSAD 2020)3 citations Open access

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24. RECENT ORNITHOLOGICAL EXPEDITIONS TO SIBERUT ISLAND, MT. TALAMAU AND RIMBO PANTI NATURE RESERVE, SUMATRA, INDONESIA

    T. Haryoko, O. Johnson, Matthew L. Brady, Subir B. Shakya +5 more

    20202 citations Open access

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25. New Avian Records Along the Elevation Gradient of the Cyclops Mountains, New Guinea, Revealed by Camera Trapping

    J. Kempton, A. Balázs, Yoel Bessoran, Yohanna Dalimunthe +25 more

    2026Birds1 citations Open access

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26. Foster Parent Development Model Approach to Strengthen Pancasila Character Values to Form the Estuary Spirit and Identity of Poltekip Cadets of the Ministry of Law and Human Rights

    T. Haryoko, Encep Syarief Nurdin, Y. Ruyadi

    2025Jurnal Ilmu Pendidikan1 citations Open access

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27. The Importance Of Character Education In Instilling Pancasila Values For Millennial Generation

    T. Haryoko

    2024Eduvest - Journal Of Universal Studies1 citations Open access

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28. Implementation of species protection act for the conservation of Tanimbar corella, Cacatua goffiniana (Roselaar & Michels, 2004)

    T. Haryoko, M. O'Hara, B. Mioduszewska, H. Sutrisno +2 more

    20211 citations Open access

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29. Variasi Ciri Morfometrik Burung Bondol di Indonesia

    Evelin Roslinawati, Wahyu Prihatini, T. Haryoko

    20191 citations

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30. Mitogenomic evidence reveals the phylogeography of Sulawesi Actenoides kingfisher linked to geological barriers

    Yohanna Yohanna, A. B. Dharmayanthi, K. Rowe, Rachael L. Joakim +7 more

    2026TREUBIA0 citations Open access

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31. Comparison of Visual Count Survey and Passive Acoustic Monitoring for Avifauna Diversity in Purwosari Village, Girimulyo, Kulonprogo

    Alfiannor Fathoni, Susilohadi, T. Haryoko, M. I. Al Ghazi +1 more

    2026Journal of Tropical Biodiversity and Biotechnology0 citations Open access

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32. Draft assemblies for 177 bird species enhance genus-level coverage

    Guangii Chen, Shuang Wang, Daniel Bilyeli Øksnebjerg, Sascha Dreyer Nielsen +65 more

    2026GigaScience0 citations Open access

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33. A comprehensive reference genome assembly dataset of birds inhabiting Denmark, Greenland, and the Faroe Islands

    Daniel Bilyeli Øksnebjerg, Sascha Dreyer Nielsen, Guangii Chen, Michael J. Andersen +89 more

    2026GigaScience0 citations Open access

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34. A new palaeo-tectonic model of New Guinea and its consequences for understanding Indo-Pacific avian diversity in space and through time

    K. Jønsson, Max Webb, J. Fotheringham, Indra Gunawan +8 more

    2026Frontiers of Biogeography0 citations Open access

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35. RANGE EXTENSIONS OF DIABOLICAL NIGHTJAR Eurostopodus diabolicus AND INDONESIAN SERIN Chrysocorythus estherae ON SULAWESI OF THE WALLACEA REGION

    Mohammad Irham, Yong-Chee-Kei-Ta Sin, Sng Chen Xi, Yohanna Yohanna +4 more

    2024TREUBIA0 citations Open access

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36. Land Cover Analysis and Habitat Identification of Tanimbar Corella (Cacatua Goffiniana) on Tanimbar Islands, Maluku

    T. Haryoko, A. B. Dharmayanthi, M. O'Hara, B. Mioduszewska +4 more

    2022Journal of Hunan University Natural Sciences0 citations Open access

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37. Description of two new bird species from the Meratus Mountains of southeast Borneo, Indonesia

    Mohammad Irham, T. Haryoko, Subir B. Shakya, Simon L. Mitchell +7 more

    2022Journal of Ornithology0 citations

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38. Reassessment on the monophyly of the fruit-piercing moth, Eudocima bilberg, 1820 (Lepidoptera: Erebidae) using molecular data

    A. B. Dharmayanthi, E. Arida, Darmawan, S. Y. Wiyati +3 more

    2021IOP Conference Series: Earth and Environment0 citations Open access

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39. Author response: Phylogenomics of white-eyes, a ‘great speciator’, reveals Indonesian archipelago as the center of lineage diversity

    Chyi Yin Gwee, Kritika M. Garg, B. Chattopadhyay, Keren R. Sadanandan +15 more

    20200 citations Open access

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40. Phylogenetic Relationship in Sulawesi Endemic Birds of White-Eye (Genus:Zosterops, Aves: Zosteropidae)

    Yohanna Yohanna, Anik Budhi Dharmayanti, Mohammad Irham, D. Prawiradilaga +1 more

    20200 citations

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