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A. Caputo · SciRah

Researcher profile · Semantic Scholar

A. Caputo

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A. Caputo — researcher profile on SciRah

h-index: 18
Works: 53
Citations: 1,769

Most-cited papers

RETRACTED ARTICLE: Culture of previously uncultured members of the human gut microbiota by culturomics
J. Lagier, S. Khelaifia, M. Alou, S. Ndongo +40 more
2016Nature Microbiology812 citations Open access
Semantic Scholar
Gut Bacteria Missing in Severe Acute Malnutrition, Can We Identify Potential Probiotics by Culturomics?
Maryam Tidjani Alou, M. Million, S. Traore, D. Mouelhi +14 more
2017Frontiers in Microbiology119 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Alistipes ihumii sp. nov.
A. Pfleiderer, A. Mishra, J. Lagier, C. Robert +3 more
2012Standards in Genomic Sciences88 citations Open access
Semantic Scholar
Genome and pan-genome analysis to classify emerging bacteria
A. Caputo, P. Fournier, D. Raoult
2019Biology Direct77 citations Open access
Semantic Scholar
Identification of Algerian Field-Caught Phlebotomine Sand Fly Vectors by MALDI-TOF MS
I. Lafri, L. Almeras, I. Bitam, A. Caputo +5 more
2016PLoS Neglected Tropical Diseases67 citations Open access
Semantic Scholar
Culture of Methanogenic Archaea from Human Colostrum and Milk
A. Togo, G. Grine, S. Khelaifia, Clotilde Des Robert +8 more
2019Scientific Reports56 citations Open access
Semantic Scholar
Deciphering the Urinary Microbiota Repertoire by Culturomics Reveals Mostly Anaerobic Bacteria From the Gut
G. Dubourg, A. Morand, F. Mekhalif, Raphael Godefroy +12 more
2020Frontiers in Microbiology54 citations Open access
Semantic Scholar
Increased fecal ethanol and enriched ethanol-producing gut bacteria Limosilactobacillus fermentum, Enterocloster bolteae, Mediterraneibacter gnavus and Streptococcus mutans in nonalcoholic steatohepatitis
B. Mbaye, Reham Magdy Wasfy, P. Borentain, Maryam Tidjani Alou +5 more
2023Frontiers in Cellular and Infection Microbiology40 citations Open access
Semantic Scholar
Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm
A. Caputo, V. Merhej, K. Georgiades, P. Fournier +3 more
2015Biology Direct35 citations Open access
Semantic Scholar
Ethanol-Producing Enterocloster bolteae Is Enriched in Chronic Hepatitis B-Associated Gut Dysbiosis: A Case–Control Culturomics Study
Reham Magdy Wasfy, B. Mbaye, P. Borentain, Maryam Tidjani Alou +6 more
2023Microorganisms34 citations Open access
Semantic Scholar
RETRACTED ARTICLE: Whole-genome assembly of Akkermansia muciniphila sequenced directly from human stool
A. Caputo, G. Dubourg, O. Croce, Sushim K Gupta +4 more
2015Biology Direct33 citations Open access
Semantic Scholar
Microvirga massiliensis sp. nov., the human commensal with the largest genome
A. Caputo, J. Lagier, Saïd Azza, C. Robert +3 more
2016MicrobiologyOpen27 citations Open access
Semantic Scholar
Pangenomic analysis of Coxiella burnetii unveils new traits in genome architecture
Rita Abou Abdallah, M. Million, J. Delerce, H. Anani +7 more
2022Frontiers in Microbiology25 citations Open access
Semantic Scholar
Multidrug-Resistant Klebsiella pneumoniae Clones from Wild Chimpanzees and Termites in Senegal
S. Baron, O. Mediannikov, R. Abdallah, Edmond Kuete Yimagou +15 more
2021Antimicrobial Agents and Chemotherapy23 citations Open access
Semantic Scholar
Limosilactobacillus fermentum, Lactococcus lactis and Thomasclavelia ramosa are enriched and Methanobrevibacter smithii is depleted in patients with non-alcoholic steatohepatitis.
B. Mbaye, R. M. Wasfy, M. Alou, P. Borentain +5 more
2023Microbial Pathogenesis22 citations Open access
Semantic Scholar
The hypervirulent Coxiella burnetii Guiana strain compared in silico, in vitro and in vivo to the Nine Mile and the German strain.
C. Melenotte, A. Caputo, Y. Bechah, H. Lepidi +6 more
2019Clinical Microbiology and Infection20 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Holdemania massiliensis sp. nov.
A. Mishra, J. Lagier, A. Pfleiderer, Thi-Thien Nguyen +3 more
2013Standards in Genomic Sciences19 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Nosocomiicoccus massiliensis sp. nov.
A. Mishra, S. Edouard, N. P. Dangui, J. Lagier +5 more
2013Standards in Genomic Sciences19 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Gorillibacterium massiliense gen. nov, sp. nov., a new member of the family Paenibacillaceae
M. B. Keita, R. Padhmanabhan, A. Caputo, C. Robert +4 more
2014Standards in Genomic Sciences15 citations Open access
Semantic Scholar
Preliminary landscape of Candidatus Saccharibacteria in the human microbiome
S. Naud, Camille Valles, Abdourahim Abdillah, L. Abou Chacra +11 more
2023Frontiers in Cellular and Infection Microbiology14 citations Open access
Semantic Scholar
Genome sequence and description of Haloferax massiliense sp. nov., a new halophilic archaeon isolated from the human gut
S. Khelaifia, A. Caputo, C. Andrieu, F. Cadoret +6 more
2018Extremophiles14 citations Open access
Semantic Scholar
New human-associated species of the family Atopobiaceae and proposal to reclassify members of the genus Olsenella.
R. Zgheib, H. Anani, M. Meng, M. Mailhe +8 more
2021International Journal of Systematic and Evolutionary Microbiology13 citations
Semantic Scholar
Multidisciplinary evaluation of Clostridium butyricum clonality isolated from preterm neonates with necrotizing enterocolitis in South France between 2009 and 2017
M. Hosny, J. Bou Khalil, A. Caputo, R. A. Abdallah +4 more
2019Scientific Reports13 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Collinsella massiliensis sp. nov.
R. Padmanabhan, G. Dubourg, J. Lagier, Thi-Thien Nguyen +5 more
2014Standards in Genomic Sciences12 citations Open access
Semantic Scholar
Significant rise of Chlamydia pneumoniae in 2024 in Marseille, France.
S. Edouard, R. Attamna, M. Million, C. Boschi +16 more
2025International Journal of Infectious Diseases11 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Clostridium saudii sp. nov
E. Angelakis, F. Bibi, Dhamodharan Ramasamy, E. Azhar +8 more
2014Standards in Genomic Sciences11 citations Open access
Semantic Scholar
Genomic diversity and evolution of coronavirus (SARS-CoV-2) in France from 309 COVID-19-infected patients
A. Levasseur, J. Delerce, A. Caputo, L. Brechard +4 more
2020bioRxiv10 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Corynebacterium jeddahense sp. nov.
S. Edouard, F. Bibi, Ramasamy Dhamodharan, J. Lagier +8 more
2014Standards in Genomic Sciences9 citations Open access
Semantic Scholar
Fenollaria timonensis sp. nov., A New Bacterium Isolated from Healthy Human Fresh Stool
C. Lo, E. Niang, M. Sarr, G. Durand +5 more
2020Current Microbiology7 citations
Semantic Scholar
Peer Review #2 of "Description of a new member of the family Erysipelotrichaceae: Dakotella fusiforme gen. nov., sp. nov., isolated from healthy human feces (v0.1)"
S. Ghimire, S. Wongkuna, J. Scaria, M. Alcaide +255 more
20207 citations Open access
Semantic Scholar
Non contiguous-finished genome sequence and description of Enorma timonensis sp. nov.
D. Ramasamy, G. Dubourg, C. Robert, A. Caputo +3 more
2014Standards in Genomic Sciences7 citations Open access
Semantic Scholar
Buttiauxella massiliensis sp. nov., Isolated from a Human Bone Infection
R. Zgheib, I. Hasni, B. Mbaye, H. Anani +7 more
2022Current Microbiology6 citations
Semantic Scholar
Passive Filtration, Rapid Scanning Electron Microscopy, and Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry for Treponema Culture and Identification from the Oral Cavity
S. Belkacemi, J. Bou Khalil, Y. Ominami, Akiko Hisada +6 more
2019Journal of Clinical Microbiology6 citations Open access
Semantic Scholar
Complete Genome Sequence of Clostridium septicum Strain CSUR P1044, Isolated from the Human Gut Microbiota
Samia Benamar, N. Cassir, A. Caputo, F. Cadoret +1 more
2016Genome Announcements6 citations Open access
Semantic Scholar
Thomasclavelia ramosa and alcohol-related hepatocellular carcinoma: a microbial culturomics study
Reham Magdy Wasfy, A. Abdoulaye, P. Borentain, B. Mbaye +7 more
2025Gut Pathogens5 citations Open access
Semantic Scholar
Investigating transmission patterns among preterm neonates during an outbreak of necrotizing enterocolitis related to Clostridium butyricum using whole genome sequencing.
C. Sartor, Yousra Mikrat, I. Grandvuillemin, A. Caputo +9 more
2024Journal of Hospital Infection5 citations
Semantic Scholar
Streptococcus bouchesdurhonensis sp. nov. isolated from a bronchoalveolar lavage of a patient with pneumonia
Malak Zoaiter, Reham Magdy Wasfy, A. Caputo, F. Fenollar +3 more
2022Archives of Microbiology5 citations
Semantic Scholar
Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm
A. Caputo, V. Merhej, K. Georgiades, P. Fournier +3 more
2015Biology Direct5 citations Open access
Semantic Scholar
Genome Sequence of Rickettsia tamurae, a Recently Detected Human Pathogen in Japan
E. Sentausa, K. El Karkouri, C. Michelle, A. Caputo +2 more
2014Genome Announcements5 citations Open access
Semantic Scholar
Identification and Characterization of an HtrA Sheddase Produced by Coxiella burnetii
Ikram Omar Osman, A. Caputo, Lucile Pinault, J. Mege +2 more
2023bioRxiv4 citations Open access
Semantic Scholar
Halobacillus ihumii sp. nov., a new bacterium isolated from stool of healthy children living in Mali
S. Konate, C. Lo, E. Kuete, M. Sarr +6 more
2020new microbes and new infections4 citations Open access
Semantic Scholar
Genome Sequence of Rickettsia hoogstraalii, a Geographically Widely Distributed Tick-Associated Bacterium
E. Sentausa, K. El Karkouri, Thi-Tien Nguyen, A. Caputo +2 more
2014Genome Announcements4 citations Open access
Semantic Scholar
Non-contiguous finished genome sequence and description of Paenibacillus gorillae sp. nov.
M. B. Keita, Roshan Padhmananabhan, A. Caputo, C. Robert +4 more
2014Standards in Genomic Sciences3 citations Open access
Semantic Scholar
Description of Agathobaculum massiliense sp. nov., a new bacterial species prevalent in the human gut and predicted to produce indole and tryptophan based on genomic analysis
Reham Magdy Wasfy, Malak Zoaiter, M. Bilen, Maryam Tidjani Alou +8 more
2023Antonie van Leeuwenhoek2 citations
Semantic Scholar
MALDI-TOF mass spectrometry coupled with machine learning: an accurate tool to detect toxigenic Clostridioides difficile strains.
Slim Hmidi, S. Edouard, J. Delerce, A. Caputo +6 more
2025Anaerobe1 citations
Semantic Scholar
Epidemiology and genomic characterisation of travel-associated and locally-acquired influenza, Marseille, France.
T. Dao, A. Levasseur, M. Tall, V. Hoang +9 more
2021Travel Medicine and Infectious Disease1 citations Open access
Semantic Scholar
Phoenicibacter congonensis gen. nov., sp. nov., a new genus isolated from the human gut and its description using a taxonogenomic approach
M. Bilen, M. Fonkou, A. Caputo, Thi-Thien Nguyen +7 more
2018Antonie van Leeuwenhoek1 citations
Semantic Scholar
Thomasclavelia ramosa is a Signature of Gut Dysbiosis associated with Alcohol-Related Hepatocellular Carcinoma: A First Microbial Culturomics Study
R. M. Wasfy, A. Abdoulaye, P. Borentain, B. Mbaye +7 more
2024medRxiv0 citations Open access
Semantic Scholar
Retraction Note: Culture of previously uncultured members of the human gut microbiota by culturomics
Jean-Christophe Lagier, S. Khelaifia, M. Alou, S. Ndongo +40 more
2024Nature Microbiology0 citations Open access
Semantic Scholar
Limosilactobacillus Fermentum, Lactococcus Lactis and Erysipelatoclostridiumramosum are Enriched and Methanobrevibactersmithii is Depleted in Patients with Non-Alcoholic Steatohepatitis
B. Mbaye, R. M. Wasfy, M. Alou, P. Borentain +5 more
2023Social Science Research Network0 citations
Semantic Scholar

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J. Lagier×15
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