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J. Pothier · SciRah

Researcher profile · Semantic Scholar

J. Pothier

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J. Pothier — researcher profile on SciRah

h-index: 32
Works: 143
Citations: 3,091

Most-cited papers

Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum).
J. V. van der Wolf, E. Nijhuis, M. Kowalewska, G. Saddler +17 more
2014International Journal of Systematic and Evolutionary Microbiology228 citations Open access
Semantic Scholar
Antibiotic Resistance Gene Diversity and Virulence Gene Diversity Are Correlated in Human Gut and Environmental Microbiomes
Pedro Escudeiro, J. Pothier, F. Dionísio, T. Nogueira
2019Msphere73 citations Open access
Semantic Scholar
Antibiotics as both friends and foes of the human gut microbiome: The microbial community approach
T. Nogueira, P. David, J. Pothier
2018Drug development research (Print)54 citations Open access
Semantic Scholar
Phylogeography and population structure of the biologically invasive phytopathogen Erwinia amylovora inferred using minisatellites.
Andreas Bühlmann, T. Dreo, F. Rezzonico, J. Pothier +4 more
2014Environmental Microbiology53 citations Open access
Semantic Scholar
Ribosomal protein biomarkers provide root nodule bacterial identification by MALDI-TOF MS
D. Ziegler, J. Pothier, J. Ardley, R. Fossou +7 more
2015Applied Microbiology and Biotechnology49 citations Open access
Semantic Scholar
Microbial diversity across compartments in an aquaponic system and its connection to the nitrogen cycle.
Zala Schmautz, J. Walser, C. Espinal, Florentina Gartmann +5 more
2022Science of the Total Environment46 citations Open access
Semantic Scholar
Metagenomic diagnostics for the simultaneous detection of multiple pathogens in human stool specimens from Côte d'Ivoire: a proof-of-concept study.
P. H. Schneeberger, S. Becker, J. Pothier, B. Duffy +4 more
2016Infection, Genetics and Evolution45 citations Open access
Semantic Scholar
Fire blight disease reactome: RNA-seq transcriptional profile of apple host plant defense responses to Erwinia amylovora pathogen infection
T. Kamber, J. Buchmann, J. Pothier, Theo H. M. Smits +2 more
2016Scientific Reports44 citations Open access
Semantic Scholar
Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry.
M. Kałużna, A. Willems, J. Pothier, Michela Ruinelli +2 more
2016Systematic and Applied Microbiology42 citations Open access
Semantic Scholar
Trends in Molecular Diagnosis and Diversity Studies for Phytosanitary Regulated Xanthomonas
V. Catara, J. Cubero, J. Pothier, Eran Bosis +12 more
2021Microorganisms41 citations Open access
Semantic Scholar
Comparative genomics and pathogenicity potential of members of the Pseudomonas syringae species complex on Prunus spp
Michela Ruinelli, J. Blom, Theo H. M. Smits, J. Pothier
2019BMC Genomics41 citations Open access
Semantic Scholar
Xanthomonas arboricola pv. juglandis and pv. corylina: Brothers or distant relatives? Genetic clues, epidemiology, and insights for disease management
M. Kałużna, M. Fischer-Lesaux, J. Pothier, M. Jacques +3 more
2021Molecular plant pathology35 citations Open access
Semantic Scholar
Are Virulence and Antibiotic Resistance Genes Linked? A Comprehensive Analysis of Bacterial Chromosomes and Plasmids
Helena Darmancier, Célia P. F. Domingues, João S. Rebelo, A. Amaro +4 more
2022Antibiotics34 citations Open access
Semantic Scholar
Role of the type VI secretion systems during disease interactions of Erwinia amylovora with its plant host
T. Kamber, J. Pothier, C. Pelludat, F. Rezzonico +2 more
2017BMC Genomics33 citations Open access
Semantic Scholar
Xanthomonas hortorum – beyond gardens: Current taxonomy, genomics, and virulence repertoires
Nay C. Dia, Lucas Morinière, B. Cottyn, E. Bernal +5 more
2022Molecular plant pathology32 citations Open access
Semantic Scholar
Frankia canadensis sp. nov., isolated from root nodules of Alnus incana subspecies rugosa.
P. Normand, I. Nouioui, P. Pujić, P. Fournier +9 more
2018International Journal of Systematic and Evolutionary Microbiology32 citations Open access
Semantic Scholar
Comparative genomics-informed design of two LAMP assays for detection of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae and discrimination of isolates belonging to the pandemic biovar 3
Michela Ruinelli, P. H. Schneeberger, P. Ferrante, Andreas Bühlmann +4 more
201732 citations Open access
Semantic Scholar
Xanthomonas euroxanthea sp. nov., a new xanthomonad species including pathogenic and non-pathogenic strains of walnut
Leonor Martins, Camila Fernandes, J. Blom, Nay C. Dia +2 more
2020International Journal of Systematic and Evolutionary Microbiology28 citations Open access
Semantic Scholar
Draft Genome Sequence of Chromatium okenii Isolated from the Stratified Alpine Lake Cadagno
Samuel M. Luedin, Nicole Liechti, R. Cox, F. Danza +7 more
2019Scientific Reports23 citations Open access
Semantic Scholar
Subspecies Typing of Streptococcus agalactiae Based on Ribosomal Subunit Protein Mass Variation by MALDI-TOF MS
J. Rothen, J. Pothier, F. Foucault, J. Blom +7 more
2019Frontiers in Microbiology23 citations Open access
Semantic Scholar
Dissemination of NDM-producing bacteria in Southern Brazil.
L. Arend, Ricardo Bergamo, Fabiano Barreto Rocha, L. Bail +8 more
2023Diagnostic microbiology and infectious disease22 citations Open access
Semantic Scholar
Comparative genomics to examine the endophytic potential of Pantoea agglomerans DAPP-PG 734
Arburon Sulja, J. Pothier, J. Blom, C. Moretti +3 more
2022BMC Genomics21 citations Open access
Semantic Scholar
Genome-based population structure analysis of the strawberry plant pathogen Xanthomonas fragariae reveals two distinct groups that evolved independently before its species description
M. Gétaz, M. Krijger, F. Rezzonico, Theo H. M. Smits +2 more
2018Microbial Genomics20 citations Open access
Semantic Scholar
Development of multilocus variable-number tandem repeat analysis (MLVA) for Xanthomonas arboricola pathovars.
S. Cesbron, J. Pothier, S. Gironde, M. Jacques +1 more
2014Journal of Microbiological Methods20 citations
Semantic Scholar
Bradyrhizobium ivorense sp. nov. as a potential local bioinoculant for Cajanus cajan cultures in Côte d’Ivoire
R. Fossou, J. Pothier, A. Zézé, X. Perret
2020International Journal of Systematic and Evolutionary Microbiology18 citations Open access
Semantic Scholar
A Community-Curated DokuWiki Resource on Diagnostics, Diversity, Pathogenicity and Genetic Control of Xanthomonads.
J. Costa, J. Pothier, Eran Bosis, Jens Boch +2 more
2023Molecular Plant-Microbe Interactions17 citations Open access
Semantic Scholar
Combined effect of thyme and clove phenolic compounds on Xanthomonas campestris pv. campestris and biocontrol of black rot disease on cabbage seeds
E. Hakalová, J. Cechová, Dorota Tekielska, A. Eichmeier +1 more
2022Frontiers in Microbiology17 citations Open access
Semantic Scholar
Mixotrophic Growth Under Micro-Oxic Conditions in the Purple Sulfur Bacterium “Thiodictyon syntrophicum”
Samuel M. Luedin, Nicola Storelli, F. Danza, S. Roman +3 more
2019Frontiers in Microbiology17 citations Open access
Semantic Scholar
A diagnostic tool for improved detection of Xanthomonas fragariae using a rapid and highly specific LAMP assay designed with comparative genomics
M. Gétaz, Andreas Bühlmann, P. H. Schneeberger, C. Van Malderghem +4 more
201717 citations Open access
Semantic Scholar
Spontaneous Resistance of Erwinia amylovora Against Bacteriophage Y2 Affects Infectivity of Multiple Phages
Leandra E. Knecht, Y. Born, C. Pelludat, J. Pothier +3 more
2022Frontiers in Microbiology16 citations Open access
Semantic Scholar
Qualitative microbiome profiling along a wastewater system in Kampala, Uganda
P. H. Schneeberger, S. Fuhrimann, S. Becker, J. Pothier +4 more
2019Scientific Reports16 citations Open access
Semantic Scholar
Complete genome sequence of “Thiodictyon syntrophicum” sp. nov. strain Cad16T, a photolithoautotrophic purple sulfur bacterium isolated from the alpine meromictic Lake Cadagno
Samuel M. Luedin, J. Pothier, F. Danza, Nicola Storelli +3 more
2018Standards in Genomic Sciences15 citations Open access
Semantic Scholar
Complete Genome Sequences of Three Isolates of Xanthomonas fragariae, the Bacterium Responsible for Angular Leaf Spots on Strawberry Plants
M. Gétaz, J. V. van der Wolf, J. Blom, J. Pothier
2017Genome Announcements15 citations Open access
Semantic Scholar
Pararhizobium polonicum sp. nov. isolated from tumors on stone fruit rootstocks.
J. Puławska, N. Kuzmanović, A. Willems, J. Pothier
2016Systematic and Applied Microbiology15 citations Open access
Semantic Scholar
Host–Pathogen Interactions between Xanthomonas fragariae and Its Host Fragaria × ananassa Investigated with a Dual RNA-Seq Analysis
M. Gétaz, J. Puławska, Theo H. M. Smits, J. Pothier
2020Microorganisms14 citations Open access
Semantic Scholar
Complete Genome Sequences of Erwinia amylovora Phages vB_EamP-S2 and vB_EamM-Bue1
Leandra E. Knecht, Y. Born, J. Pothier, M. Loessner +1 more
2018Microbiology Resource Announcements14 citations Open access
Semantic Scholar
Comparative Genomics of Xanthomonas euroxanthea and Xanthomonas arboricola pv. juglandis Strains Isolated from a Single Walnut Host Tree
Camila Fernandes, Leonor Martins, Miguel C. Teixeira, J. Blom +3 more
2021Microorganisms13 citations Open access
Semantic Scholar
Integrating science on Xanthomonadaceae for sustainable plant disease management in Europe.
J. Costa, J. Pothier, J. Boch, E. Stefani +3 more
2021Molecular plant pathology13 citations Open access
Semantic Scholar
Transcriptome analysis of Xanthomonas fragariae in strawberry leaves
J. Puławska, M. Kałużna, W. Warabieda, J. Pothier +2 more
2020Scientific Reports13 citations Open access
Semantic Scholar
The Perfect Condition for the Rising of Superbugs: Person-to-Person Contact and Antibiotic Use Are the Key Factors Responsible for the Positive Correlation between Antibiotic Resistance Gene Diversity and Virulence Gene Diversity in Human Metagenomes
Célia P. F. Domingues, João S. Rebelo, T. Nogueira, J. Pothier +2 more
2020bioRxiv12 citations Open access
Semantic Scholar
Taxonomic Refinement of Xanthomonas arboricola.
Sadegh Zarei, S. Taghavi, T. Rahimi, H. Mafakheri +9 more
2022Phytopathology11 citations Open access
Semantic Scholar
Comparative genomics of Xanthomonas fragariae and Xanthomonas arboricola pv. fragariae reveals intra- and interspecies variations
M. Gétaz, J. Blom, Theo H. M. Smits, J. Pothier
2020Phytopathology Research11 citations Open access
Semantic Scholar
Testing for Independence between Evolutionary Processes.
A. Behdenna, J. Pothier, S. Abby, A. Lambert +1 more
2016Systematic Biology11 citations
Semantic Scholar
Xanthomonas hydrangeae sp. nov., a novel plant pathogen isolated from Hydrangea arborescens.
Nay C. Dia, J. Van Vaerenbergh, C. Van Malderghem, J. Blom +3 more
2021International Journal of Systematic and Evolutionary Microbiology10 citations Open access
Semantic Scholar
Isolation and Identification of Actinomycetes Strains from Switzerland and their Biotechnological Potential.
Fabienne Arn, David Frasson, I. Kroslakova, F. Rezzonico +3 more
2020Chimia (Basel)10 citations Open access
Semantic Scholar
Complete or High-Quality Draft Genome Sequences of Six Xanthomonas hortorum Strains Sequenced with Short- and Long-Read Technologies
Nay C. Dia, F. Rezzonico, Theo H. M. Smits, J. Pothier
2020Microbiology Resource Announcements9 citations Open access
Semantic Scholar
Updated Genome Sequence and Annotation for the Full Genome of Pseudomonas protegens CHA0
Theo H. M. Smits, F. Rezzonico, David Frasson, Pilar Vesga +6 more
2019Microbiology Resource Announcements9 citations Open access
Semantic Scholar
Evaluation of a real-time PCR and a loop-mediated isothermal amplification for detection of Xanthomonas arboricola pv. pruni in plant tissue samples.
A. Palacio-Bielsa, P. López-Soriano, Andreas Bühlmann, J. V. van Doorn +7 more
2015Journal of Microbiological Methods9 citations Open access
Semantic Scholar
Race-specific genotypes of Pseudomonas syringae pv. tomato are defined by the presence of mobile DNA elements within the genome
Benedetta Orfei, J. Pothier, Linda Fenske, J. Blom +3 more
2023Frontiers in Plant Science8 citations Open access
Semantic Scholar
High-Quality Draft Genome Sequence of Xanthomonas sp. Strain CPBF 424, a Walnut-Pathogenic Strain with Atypical Features
Camila Fernandes, J. Blom, J. Pothier, F. Tavares
2018Microbiology Resource Announcements8 citations Open access
Semantic Scholar

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Theo H. M. Smits×15
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Theo H. M. Smits — researcher profile on SciRah
J. Blom×11
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J. Blom — researcher profile on SciRah
B. Duffy×8
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F. Rezzonico×8
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J. V. van der Wolf×4

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