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Y. Uga · SciRah

Researcher profile · Semantic Scholar

Y. Uga

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Y. Uga — researcher profile on SciRah

h-index: 31
Works: 103
Citations: 4,822

Most-cited papers

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions
Y. Uga, K. Sugimoto, Satoshi Ogawa, J. Rane +15 more
2013Nature Genetics1,436 citations
Semantic Scholar
Dro1, a major QTL involved in deep rooting of rice under upland field conditions.
Y. Uga, K. Okuno, M. Yano
2011Journal of Experimental Botany338 citations Open access
Semantic Scholar
The intersection of nitrogen nutrition and water use in plants: new paths toward improved crop productivity
D. Plett, Kosala Ranathunge, Vanessa J. Melino, N. Kuya +2 more
2020Journal of Experimental Botany257 citations Open access
Semantic Scholar
Drought Response in Wheat: Key Genes and Regulatory Mechanisms Controlling Root System Architecture and Transpiration Efficiency
M. Kulkarni, R. Soolanayakanahally, Satoshi Ogawa, Y. Uga +2 more
2017Frontiers in Chemistry201 citations Open access
Semantic Scholar
Root angle modifications by the DRO1 homolog improve rice yields in saline paddy fields
Y. Kitomi, E. Hanzawa, N. Kuya, H. Inoue +14 more
2020Proceedings of the National Academy of Sciences of the United States of America184 citations Open access
Semantic Scholar
Q-TARO: QTL Annotation Rice Online Database
J. Yonemaru, Toshio Yamamoto, S. Fukuoka, Y. Uga +2 more
2010Rice168 citations Open access
Semantic Scholar
Deep rooting conferred by DEEPER ROOTING 1 enhances rice yield in paddy fields
Yumiko Arai-Sanoh, T. Takai, S. Yoshinaga, H. Nakano +4 more
2014Scientific Reports160 citations Open access
Semantic Scholar
Genetic improvement for root growth angle to enhance crop production
Y. Uga, Y. Kitomi, S. Ishikawa, M. Yano
2015Breeding Science123 citations Open access
Semantic Scholar
High-throughput three-dimensional visualization of root system architecture of rice using X-ray computed tomography
S. Teramoto, Satoko Takayasu, Y. Kitomi, Yumiko Arai-Sanoh +2 more
2019Plant Methods107 citations Open access
Semantic Scholar
Variation in root morphology and anatomy among accessions of cultivated rice (Oryza sativa L.) with different genetic backgrounds
Y. Uga, K. Ebana, J. Abe, S. Morita +2 more
200991 citations Open access
Semantic Scholar
Development of Chromosome Segment Substitution Lines Derived from Backcross between indica Donor Rice Cultivar ‘Nona Bokra’ and japonica Recipient Cultivar ‘Koshihikari’
T. Takai, Y. Nonoue, Shin-ichi Yamamoto, U. Yamanouchi +6 more
200789 citations Open access
Semantic Scholar
QTLs underlying natural variation of root growth angle among rice cultivars with the same functional allele of DEEPER ROOTING 1
Y. Kitomi, Noriko Kanno, S. Kawai, T. Mizubayashi +2 more
2015Rice86 citations Open access
Semantic Scholar
A QTL for root growth angle on rice chromosome 7 is involved in the genetic pathway of DEEPER ROOTING 1
Y. Uga, Y. Kitomi, Eiji Yamamoto, Noriko Kanno +3 more
2015Rice85 citations Open access
Semantic Scholar
QTLs underlying natural variation in stele and xylem structures of rice root
Y. Uga, K. Okuno, M. Yano
200883 citations Open access
Semantic Scholar
Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields
Y. Uga, E. Hanzawa, Shinsei Nagai, K. Sasaki +2 more
2011Theoretical and Applied Genetics77 citations
Semantic Scholar
The roots of future rice harvests
N. Ahmadi, A. Audebert, M. Bennett, A. Bishopp +26 more
2014Rice75 citations Open access
Semantic Scholar
A major QTL controlling deep rooting on rice chromosome 4
Y. Uga, Eiji Yamamoto, Noriko Kanno, S. Kawai +2 more
2013Scientific Reports75 citations Open access
Semantic Scholar
Genome-wide association study of grain shape variation among Oryza sativa L. germplasms based on elliptic Fourier analysis
H. Iwata, K. Ebana, Y. Uga, Takeshi Hayashi +1 more
2010Molecular breeding68 citations
Semantic Scholar
Challenges to design-oriented breeding of root system architecture adapted to climate change
Y. Uga
2021Breeding Science63 citations Open access
Semantic Scholar
Bayesian association mapping of multiple quantitative trait loci and its application to the analysis of genetic variation among Oryza sativa L. germplasms
H. Iwata, Y. Uga, Y. Yoshioka, K. Ebana +1 more
2007Theoretical and Applied Genetics57 citations
Semantic Scholar
Constitutively active B2 Raf-like kinases are required for drought-responsive gene expression upstream of ABA-activated SnRK2 kinases
Fumiyuki Soma, F. Takahashi, S. Kidokoro, Haruka Kameoka +4 more
2023Proceedings of the National Academy of Sciences of the United States of America53 citations Open access
Semantic Scholar
Genetic architecture of variation in heading date among Asian rice accessions
K. Hori, Y. Nonoue, Nozomi Ono, T. Shibaya +31 more
2015BMC Plant Biology53 citations Open access
Semantic Scholar
Genomic Prediction of Biological Shape: Elliptic Fourier Analysis and Kernel Partial Least Squares (PLS) Regression Applied to Grain Shape Prediction in Rice (Oryza sativa L.)
H. Iwata, K. Ebana, Y. Uga, Takeshi Hayashi
2015PLoS ONE49 citations Open access
Semantic Scholar
Accumulation of additive effects generates a strong photoperiod sensitivity in the extremely late-heading rice cultivar ‘Nona Bokra’
Y. Uga, Y. Nonoue, Zheng-Wei Liang, Hong-Xuan Lin +3 more
2007Theoretical and Applied Genetics48 citations
Semantic Scholar
A Deep Learning-Based Phenotypic Analysis of Rice Root Distribution from Field Images
S. Teramoto, Y. Uga
2020Plant Phenomics43 citations Open access
Semantic Scholar
Development of introgression lines of an Indica-type rice variety, IR64, for unique agronomic traits and detection of the responsible chromosomal regions
D. Fujita, R. E. Santos, L. A. Ebron, Mary Jeanie Telebanco-Yanoria +11 more
200943 citations
Semantic Scholar
Association between root growth angle and root length density of a near-isogenic line of IR64 rice with DEEPER ROOTING 1 under different levels of soil compaction
Poornima Ramalingam, A. Kamoshita, Vivek Deshmukh, Sousuke Yaginuma +1 more
201737 citations Open access
Semantic Scholar
Fine mapping of Sta1, a quantitative trait locus determining stele transversal area, on rice chromosome 9
Y. Uga, K. Okuno, M. Yano
2010Molecular breeding35 citations
Semantic Scholar
De novo Genome Assembly of the indica Rice Variety IR64 Using Linked-Read Sequencing and Nanopore Sequencing
Tsuyoshi Tanaka, Ryo Nishijima, S. Teramoto, Y. Kitomi +3 more
2020G3: Genes, Genomes, Genetics31 citations Open access
Semantic Scholar
Isolation of a novel mutant gene for soil-surface rooting in rice (Oryza sativa L.)
E. Hanzawa, K. Sasaki, Shinsei Nagai, Mitsuhiro Obara +7 more
2013Rice31 citations Open access
Semantic Scholar
Comparative mapping of QTLs determining glume, pistil and stamen sizes in cultivated rice (Oryza sativa L.).
Y. Uga, M. Siangliw, T. Nagamine, R. Ohsawa +2 more
201028 citations
Semantic Scholar
Synergy between a shallow root system with a DRO1 homologue and localized P application improves P uptake of lowland rice
A. Oo, Y. Tsujimoto, Mana Mukai, T. Nishigaki +2 more
2021Scientific Reports26 citations Open access
Semantic Scholar
Fine Mapping of QUICK ROOTING 1 and 2, Quantitative Trait Loci Increasing Root Length in Rice
Y. Kitomi, Emari Nakao, S. Kawai, Noriko Kanno +4 more
2017G3: Genes, Genomes, Genetics26 citations Open access
Semantic Scholar
Backhoe-assisted monolith method for plant root phenotyping under upland conditions
S. Teramoto, Y. Kitomi, Ryo Nishijima, Satoko Takayasu +2 more
2019Breeding Science22 citations Open access
Semantic Scholar
iPOTs: Internet of Things-based pot system controlling optional treatment of soil water condition for plant phenotyping under drought stress.
Yuko Numajiri, Kanami Yoshino, S. Teramoto, A. Hayashi +6 more
2021The Plant Journal21 citations
Semantic Scholar
Genetic Mechanisms Involved in the Formation of Root System Architecture
Y. Kitomi, Jun-Ichi Itoh, Y. Uga
201821 citations
Semantic Scholar
RSAtrace3D: robust vectorization software for measuring monocot root system architecture
S. Teramoto, T. Tanabata, Y. Uga
2021BMC Plant Biology19 citations Open access
Semantic Scholar
Towards a deeper integrated multi-omics approach in the root system to develop climate-resilient rice
Kanami Yoshino, Yuko Numajiri, S. Teramoto, N. Kawachi +5 more
2019Molecular breeding19 citations Open access
Semantic Scholar
Characterization of Introgression Lines for Yield-related Traits with Indica-type Rice Variety IR64 Genetic Background
D. Fujita, R. E. Santos, L. A. Ebron, Mary Jeanie Telebanco-Yanoria +11 more
201019 citations Open access
Semantic Scholar
MORE PANICLES 3, a natural allele of OsTB1/FC1, impacts rice yield in paddy fields at elevated CO2 levels.
T. Takai, Yojiro Taniguchi, Megumu Takahashi, Hideki Nagasaki +23 more
2023The Plant Journal17 citations Open access
Semantic Scholar
Improving the efficiency of plant root system phenotyping through digitization and automation
S. Teramoto, Y. Uga
2022Breeding Science17 citations Open access
Semantic Scholar
The transcriptomic landscapes of rice cultivars with diverse root system architectures grown in upland field conditions.
Taiji Kawakatsu, S. Teramoto, Satoko Takayasu, Natsuko Maruyama +3 more
2021The Plant Journal17 citations
Semantic Scholar
Detection of quantitative trait loci for rice root systems grown in paddies based on nondestructive phenotyping using X-ray computed tomography.
S. Teramoto, Y. Uga
2024The Plant Journal14 citations
Semantic Scholar
Rice immediately adapts the dynamics of photosynthates translocation to roots in response to changes in soil water environment
Yuta Miyoshi, Fumiyuki Soma, Yong-Gen Yin, N. Suzui +11 more
2023Frontiers in Plant Science14 citations Open access
Semantic Scholar
Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings
Asami Tomita, Tadashi Sato, Y. Uga, Mitsuhiro Obara +1 more
2017Breeding Science14 citations Open access
Semantic Scholar
Going Deep: Roots, Carbon, and Analyzing Subsoil Carbon Dynamics.
Ezhilmathi Angela Joseph Fernando, Michael Selvaraj, Y. Uga, Wolfgang Busch +2 more
2023Molecular Plant12 citations Open access
Semantic Scholar
Genomic regions responsible for seminal and crown root lengths identified by 2D & 3D root system image analysis
Y. Uga, I. Assaranurak, Y. Kitomi, B. Larson +4 more
2018BMC Genomics12 citations Open access
Semantic Scholar
Genomics-assisted allele mining and its integration into rice breeding
Toshio Yamamoto, Y. Uga, M. Yano
201412 citations
Semantic Scholar
High-throughput three-dimensional visualization of root system architecture of rice using X-ray computed tomography
S. Teramoto, Satoko Takayasu, Y. Kitomi, Yumiko Arai-Sanoh +2 more
2020Plant Methods11 citations Open access
Semantic Scholar
Near-isogenic lines of IR64 (Oryza sativa subsp. indica cv.) introgressed with DEEPER ROOTING 1 and STELE TRANSVERSAL AREA 1 improve rice yield formation over the background parent across three water management regimes
Vivek Deshmukh, A. Kamoshita, M. Norisada, Y. Uga
201710 citations Open access
Semantic Scholar

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M. Yano×11
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