Samuel E. Zimmerman

Most-cited papers

1. Self-renewal of a purified Tie2+ hematopoietic stem cell population relies on mitochondrial clearance

   Kyoko Ito, R. Turcotte, Jinhua Cui, Samuel E. Zimmerman +12 more

   2016Science292 citations Open access

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2. Stem cell factor is selectively secreted by arterial endothelial cells in bone marrow

   Chun-Liang Xu, Xin Gao, Qiao-Zhi Wei, Fumio Nakahara +3 more

   2018Nature Communications192 citations Open access

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3. The shape of gene expression distributions matter: how incorporating distribution shape improves the interpretation of cancer transcriptomic data

   Laurence de Torrenté, Samuel E. Zimmerman, Masako Suzuki, M. Christopeit +2 more

   2019BMC Bioinformatics64 citations Open access

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4. Estrogen activates Alzheimer's disease genes

   A. Ratnakumar, Samuel E. Zimmerman, B. Jordan, J. Mar

   2019Alzheimer's & Dementia50 citations Open access

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5. The majority of CD45− CD31− Ter119− bone marrow cell fraction is of hematopoietic origin and contains erythroid and lymphoid progenitors

   P. Boulais, T. Mizoguchi, Samuel E. Zimmerman, Fumio Nakahara +4 more

   2018Immunity44 citations Open access

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6. The nutritional environment determines which and how intestinal stem cells contribute to homeostasis and tumorigenesis.

   Wenge Li, Samuel E. Zimmerman, Karina Peregrina, M. Houston +7 more

   2019Carcinogenesis27 citations Open access

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7. Snai2 maintains bone marrow niche cells by repressing osteopontin expression

   Qiao-Zhi Wei, Fumio Nakahara, N. Asada, Da-Chuan Zhang +9 more

   2020Developmental Cell20 citations Open access

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8. A direct comparison of interphase FISH versus low-coverage single cell sequencing to detect aneuploidy reveals respective strengths and weaknesses

   G. Andriani, Elaine C. Maggi, Daniel G. Piqué, Samuel E. Zimmerman +7 more

   2019Scientific Reports19 citations Open access

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9. A comparison of survival analysis methods for cancer gene expression RNA-Sequencing data.

   P. Raman, Samuel E. Zimmerman, K. Rathi, Laurence de Torrenté +6 more

   2019Cancer Genetics16 citations

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10. pathVar: a new method for pathway-based interpretation of gene expression variability

    Laurence de Torrenté, Samuel E. Zimmerman, Deanne M. Taylor, Y. Hasegawa +2 more

    2017PeerJ6 citations Open access

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11. Aneuvis: web-based exploration of numerical chromosomal variation in single cells

    Daniel G. Piqué, G. Andriani, Elaine C. Maggi, Samuel E. Zimmerman +3 more

    2018BMC Bioinformatics2 citations Open access

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12. Substrate stiffness facilitates improved induced pluripotent stem cell production through modulation of both early and late phases of cell reprogramming

    M. M. Chowdhury, Samuel E. Zimmerman, Hannah C. Leeson, C. Nefzger +5 more

    2023bioRxiv0 citations Open access

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13. Single-cell analysis of Non-CG methylation dynamics and gene expression in human oocyte maturation

    Bo Yu, N. Jayavelu, S. Battle, Thomas H. Smith +5 more

    2019bioRxiv0 citations Open access

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14. Stromal-Dependent Hematopoietic Progenitors Permeate the CD45 CD31 Ter119 Bone Marrow Cell Fraction

    P. Boulais, T. Mizoguchi, Samuel E. Zimmerman, Fumio Nakahara +4 more

    2018Experimental Hematology0 citations Open access

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15. Text outlining more details of the analyses using pathVar on human ESC and iPSC data sets

    Laurence de Torrente Mar, Samuel E. Zimmerman, Deanne M. Taylor, Y. Hasegawa +2 more

    20160 citations Open access

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