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R. Szczepanowski · SciRah

Researcher profile · Semantic Scholar

R. Szczepanowski

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R. Szczepanowski — researcher profile on SciRah

h-index: 38
Works: 59
Citations: 5,619

Most-cited papers

Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology
A. Mellmann, D. Harmsen, C. Cummings, Emily B. Zentz +16 more
2011PLoS ONE800 citations Open access
Semantic Scholar
Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics.
R. Szczepanowski, B. Linke, I. Krahn, K. Gartemann +4 more
2009Microbiology491 citations Open access
Semantic Scholar
Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool.
A. Schlüter, R. Szczepanowski, A. Pühler, E. Top
2007FEMS Microbiology Reviews407 citations
Semantic Scholar
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology.
A. Schlüter, T. Bekel, Naryttza N. Diaz, Michael Dondrup +16 more
2008Journal of Biotechnology340 citations
Semantic Scholar
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor.
L. Krause, Naryttza N. Diaz, R. Edwards, K. Gartemann +9 more
2008Journal of Biotechnology241 citations
Semantic Scholar
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing.
M. Zakrzewski, A. Goesmann, S. Jaenicke, Sebastian Jünemann +6 more
2012Journal of Biotechnology240 citations
Semantic Scholar
Occurrence of integron-associated resistance gene cassettes located on antibiotic resistance plasmids isolated from a wastewater treatment plant.
Thomas Tennstedt, R. Szczepanowski, Sebastian Braun, A. Pühler +1 more
2003FEMS Microbiology Ecology228 citations Open access
Semantic Scholar
The 64 508 bp IncP-1beta antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1beta group.
A. Schlüter, H. Heuer, R. Szczepanowski, L. Forney +3 more
2003Microbiology185 citations
Semantic Scholar
High-quality genome sequence of Pichia pastoris CBS7435.
Andreas Küberl, J. Schneider, G. Thallinger, Ingund Anderl +10 more
2011Journal of Biotechnology177 citations
Semantic Scholar
Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system.
R. Szczepanowski, I. Krahn, B. Linke, A. Goesmann +2 more
2004Microbiology156 citations Open access
Semantic Scholar
Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing
Sebastian Jünemann, K. Prior, R. Szczepanowski, I. Harks +4 more
2012PLoS ONE144 citations Open access
Semantic Scholar
The 120 592 bp IncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different antibiotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functions.
R. Szczepanowski, Sebastian Braun, V. Riedel, Susanne Schneiker +3 more
2005Microbiology139 citations
Semantic Scholar
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing.
Antje Rademacher, M. Zakrzewski, A. Schlüter, Mandy Schönberg +4 more
2012FEMS Microbiology Ecology126 citations Open access
Semantic Scholar
Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing.
Jennifer Becker, M. Hackl, O. Rupp, Tobias Jakobi +11 more
2011Journal of Biotechnology111 citations
Semantic Scholar
Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
M. Hackl, Tobias Jakobi, J. Blom, Daniel Doppmeier +13 more
2011Journal of Biotechnology108 citations Open access
Semantic Scholar
Sequence of the 68,869 bp IncP-1alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements.
Thomas Tennstedt, R. Szczepanowski, I. Krahn, A. Pühler +1 more
2005Plasmid103 citations
Semantic Scholar
Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage.
S. Heinl, D. Wibberg, F. Eikmeyer, R. Szczepanowski +7 more
2012Journal of Biotechnology96 citations
Semantic Scholar
The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1beta group without any accessory genes.
H. Heuer, R. Szczepanowski, Susanne Schneiker, A. Pühler +2 more
2004Microbiology96 citations Open access
Semantic Scholar
Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant.
A. Schlüter, L. Krause, R. Szczepanowski, A. Goesmann +1 more
2008Journal of Biotechnology88 citations
Semantic Scholar
Erythromycin Resistance-Conferring Plasmid pRSB105, Isolated from a Sewage Treatment Plant, Harbors a New Macrolide Resistance Determinant, an Integron-Containing Tn402-Like Element, and a Large Region of Unknown Function
A. Schlüter, R. Szczepanowski, N. Kurz, Susanne Schneiker +2 more
2007Applied and Environmental Microbiology85 citations Open access
Semantic Scholar
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
P. Schwientek, R. Szczepanowski, C. Rückert, J. Kalinowski +5 more
2012BMC Genomics82 citations Open access
Semantic Scholar
Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technology.
R. Szczepanowski, T. Bekel, A. Goesmann, L. Krause +5 more
2008Journal of Biotechnology81 citations
Semantic Scholar
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.
A. Tauch, J. Schneider, R. Szczepanowski, Alexandra Tilker +11 more
2008Journal of Biotechnology76 citations
Semantic Scholar
The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution.
F. Eikmeyer, Atika Hadiati, R. Szczepanowski, D. Wibberg +6 more
2012Plasmid70 citations
Semantic Scholar
Ion Torrent Personal Genome Machine Sequencing for Genomic Typing of Neisseria meningitidis for Rapid Determination of Multiple Layers of Typing Information
U. Vogel, R. Szczepanowski, H. Claus, Sebastian Jünemann +2 more
2012Journal of Clinical Microbiology63 citations Open access
Semantic Scholar
Plasmid pB8 is closely related to the prototype IncP-1beta plasmid R751 but transfers poorly to Escherichia coli and carries a new transposon encoding a small multidrug resistance efflux protein.
A. Schlüter, H. Heuer, R. Szczepanowski, S. M. Poler +3 more
2005Plasmid62 citations
Semantic Scholar
Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester
I. Maus, D. Wibberg, R. Stantscheff, F. Eikmeyer +8 more
2012Journal of Bacteriology57 citations Open access
Semantic Scholar
Genome Sequence of the Bacterium Streptomyces davawensis JCM 4913 and Heterologous Production of the Unique Antibiotic Roseoflavin
Frank Jankowitsch, J. Schwarz, C. Rückert, B. Gust +5 more
2012Journal of Bacteriology53 citations Open access
Semantic Scholar
The Sinorhizobium fredii HH103 Genome: A Comparative Analysis With S. fredii Strains Differing in Their Symbiotic Behavior With Soybean.
J. Vinardell, Sebastián Acosta-Jurado, S. Zehner, M. Göttfert +19 more
2015Molecular Plant-Microbe Interactions52 citations Open access
Semantic Scholar
Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil.
Kirsten A. K. Köhler, C. Rückert, Sarah Schatschneider, Frank-Jörg Vorhölter +7 more
2013Journal of Biotechnology49 citations
Semantic Scholar
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion
E. Trost, S. Götker, J. Schneider, S. Schneiker-Bekel +12 more
2010BMC Genomics48 citations Open access
Semantic Scholar
Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103
S. Weidner, A. Becker, I. Bonilla, S. Jaenicke +9 more
2012Journal of Bacteriology47 citations Open access
Semantic Scholar
The IncF plasmid pRSB225 isolated from a municipal wastewater treatment plant's on-site preflooder combining antibiotic resistance and putative virulence functions is highly related to virulence plasmids identified in pathogenic E. coli isolates.
D. Wibberg, R. Szczepanowski, F. Eikmeyer, A. Pühler +1 more
2013Plasmid41 citations
Semantic Scholar
Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing Technology
S. B. de Campos, J. Youn, R. Farina, S. Jaenicke +7 more
2012Microbial Ecology40 citations
Semantic Scholar
Novel Macrolide Resistance Module Carried by the IncP-1β Resistance Plasmid pRSB111, Isolated from a Wastewater Treatment Plant
R. Szczepanowski, I. Krahn, Nadine Bohn, A. Pühler +1 more
2006Antimicrobial Agents and Chemotherapy40 citations Open access
Semantic Scholar
Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.
V. Luque-Almagro, F. Acera, M. Igeño, D. Wibberg +24 more
2013Environmental Microbiology39 citations
Semantic Scholar
Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
T. Strobel, Arwa Al-Dilaimi, J. Blom, Arne Gessner +6 more
2012BMC Genomics38 citations Open access
Semantic Scholar
Carbapenem-Hydrolyzing GES-5-Encoding Gene on Different Plasmid Types Recovered from a Bacterial Community in a Sewage Treatment Plant
D. Girlich, L. Poirel, R. Szczepanowski, A. Schlüter +1 more
2011Applied and Environmental Microbiology38 citations Open access
Semantic Scholar
Sequencing of high G+C microbial genomes using the ultrafast pyrosequencing technology.
P. Schwientek, R. Szczepanowski, C. Rückert, J. Stoye +1 more
2011Journal of Biotechnology37 citations
Semantic Scholar
IncP-1β Plasmid pGNB1 Isolated from a Bacterial Community from a Wastewater Treatment Plant Mediates Decolorization of Triphenylmethane Dyes
A. Schlüter, I. Krahn, Florian Kollin, Gabriele Bönemann +4 more
2007Applied and Environmental Microbiology37 citations Open access
Semantic Scholar
The 64508 bp IncP-1 b antibiotic multiresistance plasmid pB 10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1 b group
A. Schlüter, H. Heuer, R. Szczepanowski, L. Forney +3 more
200335 citations
Semantic Scholar
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids.
C. Rückert, R. Szczepanowski, Andreas Albersmeier, A. Goesmann +7 more
2013Journal of Biotechnology26 citations
Semantic Scholar
Sequencing and comparative analysis of IncP-1α antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions.
R. Szczepanowski, F. Eikmeyer, J. Harfmann, J. Blom +3 more
2011Journal of Biotechnology24 citations
Semantic Scholar
Different molecular rearrangements in the integron of the IncP-1β resistance plasmid pB10 isolated from a wastewater treatment plant result in elevated β-lactam resistance levels
R. Szczepanowski, I. Krahn, A. Pühler, A. Schlüter
2004Archives of Microbiology23 citations
Semantic Scholar
First genomic analysis of the broad-host-range Rhizobium sp. LPU83 strain, a member of the low-genetic diversity Oregon-like Rhizobium sp. group.
G. T. Tejerizo, M. D. Del Papa, W. Draghi, M. Lozano +10 more
2011Journal of Biotechnology21 citations
Semantic Scholar
Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10
J. Schneider, Heiko Andrea, J. Blom, S. Jaenicke +10 more
2012Eukaryotic Cell20 citations Open access
Semantic Scholar
Genome Sequence of Sinorhizobium meliloti Rm41
S. Weidner, Birgit Baumgarth, M. Göttfert, S. Jaenicke +5 more
2013Genome Announcements19 citations Open access
Semantic Scholar
Complete genome sequence of the actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin.
C. Rückert, R. Szczepanowski, Andreas Albersmeier, A. Goesmann +6 more
2014Journal of Biotechnology17 citations
Semantic Scholar
Next-generation sequencing of the CHO cell transcriptome
Jennifer Becker, C. Timmermann, Tobias Jakobi, O. Rupp +9 more
2011BMC Proceedings10 citations Open access
Semantic Scholar
Genome sequence of the halotolerant bacterium Corynebacterium halotolerans type strain YIM 70093T (= DSM 44683T)
C. Rückert, Andreas Albersmeier, Arwa Al-Dilaimi, K. Niehaus +2 more
2012Standards in Genomic Sciences8 citations Open access
Semantic Scholar

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