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Blake T. Hovde · SciRah

Researcher profile · Semantic Scholar

Blake T. Hovde

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Blake T. Hovde — researcher profile on SciRah

h-index: 16
Works: 48
Citations: 993

Most-cited papers

A synthetic homing endonuclease-based gene drive system in the human malaria mosquito
N. Windbichler, M. Menichelli, P. Papathanos, S. Thyme +7 more
2011Nature341 citations Open access
Semantic Scholar
Development of a high-productivity, halophilic, thermotolerant microalga Picochlorum renovo
Lukas R. Dahlin, A. Gerritsen, Calvin A. Henard, S. Van Wychen +6 more
2019Communications Biology76 citations Open access
Semantic Scholar
Genome Sequence and Transcriptome Analyses of Chrysochromulina tobin: Metabolic Tools for Enhanced Algal Fitness in the Prominent Order Prymnesiales (Haptophyceae)
Blake T. Hovde, Chloe R. Deodato, Heather M. Hunsperger, Scott A. Ryken +7 more
2015PLoS Genetics66 citations Open access
Semantic Scholar
New Human Chromosomal Sites with “Safe Harbor” Potential for Targeted Transgene Insertion
Stefan Pellenz, Michael P. Phelps, Wei-Liang Tang, Blake T. Hovde +5 more
2019Human Gene Therapy58 citations Open access
Semantic Scholar
Genomic characterization reveals significant divergence within Chlorella sorokiniana (Chlorellales, Trebouxiophyceae)
Blake T. Hovde, Erik R. Hanschen, Christina R. Steadman Tyler, C. Lo +9 more
2018Algal Research37 citations Open access
Semantic Scholar
The mitochondrial and chloroplast genomes of the haptophyte Chrysochromulina tobin contain unique repeat structures and gene profiles
Blake T. Hovde, S. Starkenburg, Heather M. Hunsperger, Laina D. Mercer +5 more
2014BMC Genomics36 citations Open access
Semantic Scholar
High-throughput phenotyping of cell-to-cell interactions in gel microdroplet pico-cultures.
J. Ohan, B. Pelle, P. Nath, J.-H. Huang +4 more
2019BioTechniques30 citations Open access
Semantic Scholar
Global transcriptome profile of the developmental principles of in vitro iPSC-to-motor neuron differentiation
E. Solomon, Katie Davis-Anderson, Blake T. Hovde, Sofiya N. Micheva-Viteva +3 more
2020BMC Molecular and Cell Biology28 citations Open access
Semantic Scholar
Draft Genome Sequence of Sorghum Grain Mold Fungus Epicoccum sorghinum, a Producer of Tenuazonic Acid
R. C. Oliveira, K. Davenport, Blake T. Hovde, D. Silva +3 more
2017Genome Announcements26 citations Open access
Semantic Scholar
Transposon insertional mutagenesis in Saccharomyces uvarum reveals trans-acting effects influencing species-dependent essential genes
Monica R. Sanchez, Celia Payen, F. Cheong, Blake T. Hovde +6 more
2017bioRxiv24 citations Open access
Semantic Scholar
Draft Nuclear Genome, Complete Chloroplast Genome, and Complete Mitochondrial Genome for the Biofuel/Bioproduct Feedstock Species Scenedesmus obliquus Strain DOE0152z
S. Starkenburg, Juergen Polle, Blake T. Hovde, H. Daligault +4 more
2017Genome Announcements24 citations Open access
Semantic Scholar
Comprehensive homing endonuclease target site specificity profiling reveals evolutionary constraints and enables genome engineering applications
Hui Li, Umut Y. Ulge, Blake T. Hovde, L. Doyle +1 more
2011Nucleic Acids Research22 citations Open access
Semantic Scholar
Nuclear, Chloroplast, and Mitochondrial Genome Sequences of the Prospective Microalgal Biofuel Strain Picochlorum soloecismus
C. Raul Gonzalez-Esquer, Scott N. Twary, Blake T. Hovde, S. Starkenburg
2018Genome Announcements21 citations Open access
Semantic Scholar
Microbial Diversity in Bushmeat Samples Recovered from the Serengeti Ecosystem in Tanzania
Robab Katani, M. Schilling, Beatus Lyimo, Triza Tonui +17 more
2019Scientific Reports19 citations Open access
Semantic Scholar
An evaluation of methodology to determine algal genome completeness
Erik R. Hanschen, Blake T. Hovde, S. Starkenburg
2020Algal Research17 citations Open access
Semantic Scholar
Nuclear Genome Assembly of the Microalga Nannochloropsis salina CCMP1776
J. Ohan, Blake T. Hovde, Xiaojing Zhang, Karen W. Davenport +4 more
2019Microbiology Resource Announcements16 citations Open access
Semantic Scholar
High-Quality Draft Genome Sequence of the Green Alga Tetraselmis striata (Chlorophyta) Generated from PacBio Sequencing
Christina R. Steadman Tyler, Blake T. Hovde, H. Daligault, Xiang-Li Zhang +4 more
2019Microbiology Resource Announcements16 citations Open access
Semantic Scholar
Chrysochromulina: Genomic assessment and taxonomic diagnosis of the type species for an oleaginous algal clade
Blake T. Hovde, Chloe R. Deodato, R. Andersen, S. Starkenburg +2 more
2019Algal Research16 citations Open access
Semantic Scholar
Genome Sequences of Eight Bacterial Species Found in Coculture with the Haptophyte Chrysochromulina tobin
K. Fixen, S. Starkenburg, Blake T. Hovde, Shannon L. Johnson +5 more
2016Genome Announcements14 citations Open access
Semantic Scholar
Vampirovibrio chlorellavorus draft genome sequence, annotation, and preliminary characterization of pathogenicity determinants
Blake T. Hovde, S. Steichen, S. Starkenburg, Judith K. Brown
2020Phycological Research13 citations Open access
Semantic Scholar
Addressing the pervasive scarcity of structural annotation in eukaryotic algae
T. Kwon, Erik R. Hanschen, Blake T. Hovde
2023Scientific Reports12 citations Open access
Semantic Scholar
Phylogenetic analyses and reclassification of the oleaginous marine species Nannochloris sp. “desiccata" (Trebouxiophyceae, Chlorophyta), formerly Chlorella desiccata, supported by a high‐quality genome assembly
C. K. Sanders, Erik R. Hanschen, Thomas C. Biondi, Blake T. Hovde +4 more
2022Journal of Phycology11 citations Open access
Semantic Scholar
Detection of Abrin-Like and Prepropulchellin-Like Toxin Genes and Transcripts Using Whole Genome Sequencing and Full-Length Transcript Sequencing of Abrus precatorius
Blake T. Hovde, H. Daligault, Erik R. Hanschen, Yuliya Kunde +3 more
2019Toxins10 citations Open access
Semantic Scholar
The telomere-to-telomere, gapless, phased diploid genome and methylome of the green alga Scenedesmus obliquus UTEX 3031 reveals significant heterozygosity and genetic divergence of the haplotypes
Thomas C. Biondi, Colin P. S. Kruse, Samuel I. Koehler, Taehyung Kwon +9 more
2024Algal Research9 citations Open access
Semantic Scholar
CRISPR/Cas9 Directed Reprogramming of iPSC for Accelerated Motor Neuron Differentiation Leads to Dysregulation of Neuronal Fate Patterning and Function
Katie Davis-Anderson, Sofiya N. Micheva-Viteva, Emilia Solomon, Blake T. Hovde +4 more
2023International Journal of Molecular Sciences9 citations Open access
Semantic Scholar
Global characterization of biosynthetic gene clusters in non-model eukaryotes using domain architectures
Taehyung Kwon, Blake T. Hovde
2024Scientific Reports8 citations Open access
Semantic Scholar
Scale-dependent enhancement of productivity and stability in xenic Nannochloropsis cultures
A. Corcoran, J. Ohan, Erik R. Hanschen, A. Granite +4 more
2022Algal Research7 citations Open access
Semantic Scholar
The Genome Sequence of an Algal Strain of Nannochloropsis QH25
Monica R. Sanchez, Thomas C. Biondi, Yuliya Kunde, Wyatt Eng +5 more
2022Microbiology Resource Announcements5 citations Open access
Semantic Scholar
Naked Chrysochromulina (Haptophyta) isolates from lake and river ecosystems: An electron microscopic comparison including new observations on the type species of this taxon
Chloe R. Deodato, S. Barlow, Blake T. Hovde, R. Cattolico
2019Algal Research5 citations Open access
Semantic Scholar
Metabolic trade-offs in response to increased acetate metabolism in Escherichia coli
Jennifer T. Pentz, Samuel I. Koehler, Earl A. Middlebrook, Kayley T. You Mak +2 more
2024bioRxiv4 citations Open access
Semantic Scholar
Development of a field-deployable qPCR assay for real-time pest monitoring in algal cultivation systems
Monica R. Sanchez, Ellen Denning, Thomas C. Biondi, Blake T. Hovde +17 more
2023Algal Research4 citations Open access
Semantic Scholar
High-Quality Genome Assembly of Nannochloris desiccata 2437 and Its Associated Bacterial Community
C. K. Sanders, Thomas C. Biondi, Wyatt Eng, Yuliya Kunde +2 more
2022Microbiology Resource Announcements3 citations Open access
Semantic Scholar
New human chromosomal safe harbor sites for genome engineering with CRISPR/Cas9, TAL effector and homing endonucleases
Stefan Pellenz, Michael P. Phelps, Wei-Liang Tang, Blake T. Hovde +5 more
2018bioRxiv3 citations Open access
Semantic Scholar
Genome assembly and annotation of the biofuel- and bioproduct-relevant microalga Nannochloropsis oceanica CCAP849/10
S. Starkenburg, Thomas C. Biondi, Colin P. S. Kruse, Wyatt Eng +4 more
2026Microbiology Resource Announcements1 citations Open access
Semantic Scholar
The draft genome sequence of a predatory Oligoflexus bacterium infecting a eukaryotic alga
Monica R Mascarenas, Blake T. Hovde, Thomas C. Biondi, Yuliya Kunde +3 more
2025Microbiology Resource Announcements1 citations Open access
Semantic Scholar
Protocol to detect dilution cycles in chemostat experiments and estimate growth rate slopes with linear modeling with R software chemostat_regression
Samuel I. Koehler, Jennifer T. Pentz, Earl A Middlebrook, Blake T. Hovde +1 more
2025STAR Protocols1 citations Open access
Semantic Scholar
Draft genome sequences of related Paeniglutamicibacter sp. isolates from two disparate cave systems
Earl A. Middlebrook, Jennifer Hathaway, Anastasia Pittis, George Abernathy +16 more
2025Microbiology Resource Announcements1 citations Open access
Semantic Scholar
The telomere-to-telomere, gapless, phased diploid genome and methylome of the green alga Scenedesmus obliquus UTEX 3031 reveals significant heterozygosity and functional separation of the haplotypes
Thomas C. Biondi, Colin P. S. Kruse, Samuel I. Koehler, T. Kwon +8 more
2022bioRxiv1 citations Open access
Semantic Scholar
Global transcriptome profile of the developmental principles of in vitro iPSC-to-motor neuron differentiation
E. Solomon, Katie Davis-Anderson, Blake T. Hovde, Sofiya N. Micheva-Viteva +3 more
2021BMC Molecular and Cell Biology1 citations Open access
Semantic Scholar
Use ATCCfinder to identify commercially available American Type Culture Collection strains based on sequence queries.
Samuel I. Koehler, Earl A Middlebrook, Blake T. Hovde, Erik R. Hanschen
2025PeerJ0 citations Open access
Semantic Scholar
Salinity Stress and the Holobiont: Investigating Algal-Bacterial Interactions in Chrysochromulina tobinii
Anna Welch, Blake T. Hovde, R. Cattolico
20240 citations Open access
Semantic Scholar
Methods for safely sharing dual-use genetic data
Sterling Sawaya, Chien-Chi Lo, Po-E Li, Blake T. Hovde +1 more
2024medRxiv0 citations Open access
Semantic Scholar
Correction for Sanchez et al., “The Genome Sequence of an Algal Strain of Nannochloropsis QH25”
Monica R. Sanchez, Thomas C. Biondi, Yuliya Kunde, Wyatt Eng +5 more
2023Microbiology Resource Announcements0 citations Open access
Semantic Scholar
Bacterial bioremediation of n-butanol
Kayley You Mak, Erik R. Hanschen, Blake T. Hovde
20220 citations Open access
Semantic Scholar
High-Quality Draft Genome Sequence of the Green Alga <italic toggle='yes'>Tetraselmis striata</italic> (Chlorophyta) Generated from PacBio Sequencing
Christina R. Steadman Tyler, Blake T. Hovde, H. Daligault, Xiang-Li Zhang +4 more
20190 citations
Semantic Scholar
Playing hide and seek: Physical factors influencing the presence of submerged macrophytes in the Jemez Mountains
V. F. Thompson, Juchao Yan, David Arellano, Blake T. Hovde +2 more
20180 citations
Semantic Scholar
New tools, targets and approaches for gene, genome and metabolic engineering
Blake T. Hovde
20150 citations
Semantic Scholar
Heme Metabolic Gene Expression In FLVCR-Knockout Mice During T Cell Development
M. Philip, Alexandra Zaballa, Blake T. Hovde, J. Abkowitz
20100 citations
Semantic Scholar

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