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Jonathan S. Packer · SciRah

Researcher profile · Semantic Scholar

Jonathan S. Packer

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Jonathan S. Packer — researcher profile on SciRah

h-index: 15
Works: 20
Citations: 7,068

Most-cited papers

Single-cell mRNA quantification and differential analysis with Census
Xiao-Jie Qiu, Andrew J. Hill, Jonathan S. Packer, Dejun Lin +3 more
2017Nature Methods1,731 citations Open access
Semantic Scholar
Joint profiling of chromatin accessibility and gene expression in thousands of single cells
Junyue Cao, D. Cusanovich, Vijay Ramani, D. Aghamirzaie +10 more
2018Science850 citations Open access
Semantic Scholar
Cicero predicts cis-regulatory DNA interactions from single cell chromatin accessibility data
H. Pliner, Jonathan S. Packer, J. McFaline-Figueroa, D. Cusanovich +10 more
2018Molecules and Cells726 citations Open access
Semantic Scholar
A Protein-Truncating HSD17B13 Variant and Protection from Chronic Liver Disease
Noura S. Abul-Husn, Xi-Ping Cheng, Alexander Hanbo Li, Yurong Xin +44 more
2018New England Journal of Medicine701 citations Open access
Semantic Scholar
Single-Cell Transcriptional Profiling of a Multicellular Organism
Junyue Cao, Jonathan S. Packer
2017611 citations
Semantic Scholar
A lineage-resolved molecular atlas of C. elegans embryogenesis at single cell resolution
Jonathan S. Packer, Qin Zhu, C. Huynh, Priya Sivaramakrishnan +8 more
2019Science517 citations Open access
Semantic Scholar
Distribution and clinical impact of functional variants in 50,726 whole-exome sequences from the DiscovEHR study
F. Dewey, M. Murray, J. Overton, L. Habegger +50 more
2016Science508 citations
Semantic Scholar
Massively multiplex chemical transcriptomics at single-cell resolution
S. Srivatsan, J. McFaline-Figueroa, Vijay Ramani, Lauren M. Saunders +10 more
2019Science422 citations Open access
Semantic Scholar
On the design of CRISPR-based single cell molecular screens
Andrew J. Hill, J. McFaline-Figueroa, Lea M. Starita, Molly Gasperini +5 more
2018Nature Methods241 citations Open access
Semantic Scholar
Embryo-scale, single cell spatial transcriptomics
S. Srivatsan, Mary C. Regier, Eliza R. Barkan, J. Franks +11 more
2021Science239 citations Open access
Semantic Scholar
Comprehensive single cell transcriptional profiling of a multicellular organism
Jun-Yue Cao, Jonathan S. Packer, Vijay Ramani, D. Cusanovich +10 more
2017Science199 citations Open access
Semantic Scholar
Thyroid hormone regulates distinct paths to maturation in pigment cell lineages
Lauren M. Saunders, A. Mishra, Andrew J. Aman, V. Lewis +7 more
2019bioRxiv130 citations Open access
Semantic Scholar
CLAMMS: a scalable algorithm for calling common and rare copy number variants from exome sequencing data
Jonathan S. Packer, E. Maxwell, C. O'Dushlaine, A. Lopez +6 more
2015Bioinform.94 citations Open access
Semantic Scholar
Single cell multi-omics: an engine for new quantitative models of gene regulation
Jonathan S. Packer, C. Trapnell
2018Trends in Genetics87 citations Open access
Semantic Scholar
Chromatin accessibility dynamics of myogenesis at single cell resolution
H. Pliner, Jonathan S. Packer, J. McFaline-Figueroa, D. Cusanovich +9 more
2017bioRxiv21 citations Open access
Semantic Scholar
Profiling copy number variation and disease associations from 50,726 DiscovEHR Study exomes
E. Maxwell, Jonathan S. Packer, C. O'Dushlaine, Shane E. McCarthy +34 more
2017bioRxiv8 citations Open access
Semantic Scholar
Dystrophin deficiency impairs cell junction formation during embryonic myogenesis from pluripotent stem cells
Elise Mozin, E. Massouridès, V. Mournetas, C. Lièvre +10 more
2024iScience6 citations Open access
Semantic Scholar
Dystrophin deficiency impairs cell junction formation during embryonic myogenesis
Elise Mozin, E. Massouridès, V. Mournetas, C. Lièvre +10 more
2023bioRxiv1 citations Open access
Semantic Scholar
Author response: Thyroid hormone regulates distinct paths to maturation in pigment cell lineages
Lauren M. Saunders, A. Mishra, Andrew J. Aman, V. Lewis +7 more
20191 citations Open access
Semantic Scholar
Principles of Systems Biology, No. 21.
Junyue Cao, Jonathan S. Packer, R. Waterston, C. Trapnell +22 more
2017Cell Systems0 citations Open access
Semantic Scholar

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