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A. Karakuzu · SciRah

Researcher profile · Semantic Scholar

A. Karakuzu

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A. Karakuzu — researcher profile on SciRah

h-index: 13
Works: 44
Citations: 730

Most-cited papers

An interactive meta-analysis of MRI biomarkers of myelin
Matteo Mancini, A. Karakuzu, J. Cohen-Adad, M. Cercignani +2 more
2020bioRxiv144 citations Open access
Semantic Scholar
Open and reproducible neuroimaging: From study inception to publication
G. Niso, Rotem Botvinik-Nezer, S. Appelhoff, A. Vega +19 more
2022NeuroImage86 citations Open access
Semantic Scholar
qMRLab: Quantitative MRI analysis, under one umbrella
A. Karakuzu, Mathieu Boudreau, T. Duval, Tommy Boshkovski +7 more
2020Journal of Open Source Software74 citations Open access
Semantic Scholar
The past, present, and future of the brain imaging data structure (BIDS)
R. Poldrack, Christopher J. Markiewicz, S. Appelhoff, Y. Ashar +111 more
2023Imaging Neuroscience63 citations Open access
Semantic Scholar
Combined magnetic resonance and diffusion tensor imaging analyses provide a powerful tool for in vivo assessment of deformation along human muscle fibers.
Uluç Pamuk, A. Karakuzu, C. Ozturk, B. Acar +1 more
2016Journal of The Mechanical Behavior of Biomedical Materials57 citations
Semantic Scholar
Magnetic resonance and diffusion tensor imaging analyses indicate heterogeneous strains along human medial gastrocnemius fascicles caused by submaximal plantar-flexion activity.
A. Karakuzu, Uluç Pamuk, C. Ozturk, B. Acar +1 more
2017Journal of Biomechanics55 citations
Semantic Scholar
Vendor-neutral sequences and fully transparent workflows improve inter-vendor reproducibility of quantitative MRI
A. Karakuzu, L. Biswas, J. Cohen-Adad, N. Stikov
2021bioRxiv48 citations Open access
Semantic Scholar
CG-SENSE revisited: Results from the first ISMRM reproducibility challenge
O. Maier, S. Baete, A. Fyrdahl, Kerstin Hammernik +10 more
2020Magnetic Resonance in Medicine43 citations Open access
Semantic Scholar
Centering inclusivity in the design of online conferences-An OHBM-Open Science perspective.
E. Levitis, C. V. van Praag, Rémi Gau, Stephan Heunis +106 more
2021GigaScience29 citations Open access
Semantic Scholar
Arterial stiffness and white matter integrity in the elderly: A diffusion tensor and magnetization transfer imaging study
A. Badji, A. N. de la Colina, A. Karakuzu, T. Duval +7 more
2019NeuroImage20 citations
Semantic Scholar
Repeat it without me: Crowdsourcing the T1 mapping common ground via the ISMRM reproducibility challenge
Mathieu Boudreau, A. Karakuzu, Julien Cohen-Adad, Ecem Bozkurt +38 more
2024Magnetic Resonance in Medicine18 citations Open access
Semantic Scholar
A Cross-Sectional Study on the Impact of Arterial Stiffness on the Corpus Callosum, a Key White Matter Tract Implicated in Alzheimer’s Disease
A. Badji, A. N. de la Colina, Tommy Boshkovski, Dalia Sabra +10 more
2020Journal of Alzheimer's Disease14 citations
Semantic Scholar
Arterial stiffness cut-off value and white matter integrity in the elderly
A. Badji, A. E. Noriega de la Colina, A. Karakuzu, T. Duval +8 more
2019NeuroImage: Clinical14 citations Open access
Semantic Scholar
Beyond advertising: New infrastructures for publishing integrated research objects
E. Dupre, C. Holdgraf, A. Karakuzu, Loïc Tetrel +3 more
2022PLoS Comput. Biol.13 citations Open access
Semantic Scholar
Analysis of microcantilevers excited by pulsed-laser-induced photoacoustic waves.
Aytac Demirkiran, A. Karakuzu, H. Erkol, H. Torun +1 more
2018Optics Express9 citations Open access
Semantic Scholar
Longitudinal reproducibility of brain and spinal cord quantitative MRI biomarkers
Mathieu Boudreau, A. Karakuzu, Arnaud Boré, B. Pinsard +5 more
2025Imaging Neuroscience6 citations Open access
Semantic Scholar
Reproducible Research Practices in Magnetic Resonance Neuroimaging: A Review Informed by Advanced Language Models
A. Karakuzu, Mathieu Boudreau, N. Stikov
2024Magnetic Resonance in Medical Sciences6 citations Open access
Semantic Scholar
Rethinking MRI as a measurement device through modular and portable pipelines
A. Karakuzu, Nadia Blostein, A. Caron, Arnaud Boré +3 more
2025Magnetic Resonance Materials in Physics, Biology and Medicine5 citations Open access
Semantic Scholar
Let’s talk about cardiac T1 mapping
T. Hafyane, A. Karakuzu, Catherine Duquette, F. Mongeon +4 more
2018bioRxiv5 citations Open access
Semantic Scholar
The relaxometry hype cycle
N. Stikov, A. Karakuzu
2023Frontiers in Physiology4 citations Open access
Semantic Scholar
In-vivo along muscle fascicle strain heterogeneity is not affected by image registration parameters: Robustness testing of combined magnetic resonance-diffusion tensor imaging method.
A. Karakuzu, Arda Arpak, C. Yucesoy
2023Journal of The Mechanical Behavior of Biomedical Materials3 citations Open access
Semantic Scholar
Centering inclusivity in the design of online conferences
E. Levitis, C. D. Gould van Praag, Rémi Gau, Stephan Heunis +106 more
20213 citations Open access
Semantic Scholar
The quest for measuring myelin with MRI – An interactive meta-analysis of quantitative comparisons with histology
Matteo Mancini, A. Karakuzu, Thomas E. Nichols, J. Cohen-Adad +2 more
20203 citations
Semantic Scholar
Toward a woven literature: Open-source infrastructure for networked scientific publishing
A. Karakuzu
2025Aperture Neuro2 citations Open access
Semantic Scholar
Successful return to play following adductor longus proximal tendon rupture in professional soccer without re-injury at 12 months: A case report
Ömer Batın Gözübüyük, M. Moen, Mehmet Akman, Ioakim Ipseftel +1 more
2018Journal of Back and Musculoskeletal Rehabilitation2 citations
Semantic Scholar
Evaluation of Magnetization Transfer Contrast Sequences: Application to Monitor Age-Related Differences in Muscle Macromolecular Fraction
Austin Crispin-Smith, Ti Wu, I. Leppert, A. Karakuzu +2 more
2025Tomography1 citations Open access
Semantic Scholar
Vendor-neutral sequences (VENUS) and fully transparent workflows 1 improve inter-vendor reproducibility of quantitative MRI
A. Karakuzu, L. Biswas, J. Cohen-Adad, N. Stikov
20211 citations
Semantic Scholar
Assessment of in-vivo skeletal muscle mechanics during joint motion using multimodal magnetic resonance imaging based approaches
A. Karakuzu, Uluç Pamuk, C. Ozturk, C. Yucesoy
2014National Biomedical Engineering Meeting1 citations
Semantic Scholar
Vendor-neutral MP2RAGE with Pulseq in VENUS: Three vendors and five scanners
A. Karakuzu, A. Hagiwara, W. Uchida, K. Kamagata +5 more
ISMRM Annual Meeting1 citations
Semantic Scholar
Vendor-neutrality and upgrade immunity: Post-upgrade assessment of vendor-neutral qMRI from two perspectives
A. Karakuzu, Paule Samson, N. Stikov
ISMRM Annual Meeting1 citations
Semantic Scholar
In-Vivo Along Muscle Fascicle Strain Heterogeneity is Not Affected by Image Registration Parameters: Robustness Testing of Combined Magnetic Resonance-Diffusion Tensor Imaging Method
A. Karakuzu, Arda Arpak, C. Yucesoy
2022Social Science Research Network0 citations Open access
Semantic Scholar
Fiber direction strain heterogeneity analysis
A. Karakuzu, Arda Arpak
20210 citations
Semantic Scholar
NeuroLibre: A sprout of living publications
A. Karakuzu, E. Dupre
20200 citations
Semantic Scholar
Jim's MTR analysis
A. Karakuzu
20200 citations
Semantic Scholar
Ex-Vivo Canine Spinal Cord
A. Karakuzu, N. Stikov, J. Cohen-Adad, T. Duval +1 more
20180 citations
Semantic Scholar
The role of intra- and epimuscular fasciae beyond being passive structural elements: MRI analyses indicate that they interfere with and affect muscle’s active mechanics
Omer Batin Gozubuyuk, A. Karakuzu, Uluç Pamuk, C. Yucesoy
2018Journal of Bodywork & Movement Therapies0 citations
Semantic Scholar
qMRI Dataset: Ex-Vivo Pig Heart
A. Karakuzu, N. Stikov, D. Hung
20170 citations
Semantic Scholar
MRI analyses indicate non-uniform human muscle tissue deformations and confirm theoretically anticipated sarcomere length heterogeneity, in vivo
Uluç Pamuk, A. Karakuzu, Pinar Akyazi, B. Acar +2 more
2014National Biomedical Engineering Meeting0 citations
Semantic Scholar
MRG Analizleri Karmaşik İnsan Kasi Deformasyonlarinin Varliğina İşaret Etmekte ve Teorik Sarkomer Boy Heterojenitesi Beklentisini in vivo Koşulda Desteklemektedir MRI Analyses Indicate Non-uniform Human Muscle Tissue Deformations and Confirm Theoretically Anticipated Sarcomere Length Heterogeneity,
Uluç Pamuk, A. Karakuzu, B. Acar, Cengizhan Ozturk
20140 citations
Semantic Scholar
Longitudinal stability of brain and spinal cord structural quantitative MRI measures
Mathieu Boudreau, A. Karakuzu, Arnaud Boré, Kiril Zelenkovski +5 more
ISMRM Annual Meeting0 citations
Semantic Scholar
NeuroLibre: Living MRI preprints with built-in support for code review
A. Karakuzu, Elizabeth Dupre, Patrick Bermudez, Mathieu Boudreau +5 more
ISMRM Annual Meeting0 citations
Semantic Scholar
Strong Coupling of Retinal Thickness and Optic Nerve Myelin in Vivo
H. Plante, A. Karakuzu, A. Qadi, Mathieu Boudreau +5 more
0 citations
Semantic Scholar
Multicenter reproducibility of quantitative MRI using vendor-neutral sequences (VENUS)
A. Karakuzu, J. Cohen-Adad, N. Stikov
ISMRM Annual Meeting0 citations
Semantic Scholar
Phantom Results of the ISMRM Joint RRSG–qMRSG Reproducibility Challenge on T1 mapping
Mathieu Boudreau, A. Karakuzu, Julien Cohen-Adad, Madeline G Carr +29 more
ISMRM Annual Meeting0 citations
Semantic Scholar

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