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R. Vierstra · SciRah

Researcher profile · Semantic Scholar

R. Vierstra

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R. Vierstra — researcher profile on SciRah

h-index: 102
Works: 348
Citations: 47K

Most-cited papers

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1
D. Klionsky, Amal Kamal Abdel-Aziz, Sara Abdelfatah, M. Abdellatif +496 more
2021Autophagy4,016 citations Open access
Semantic Scholar
Editorial :Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). DOI: 10.1080/15548627.2015.1100356;WOS:000373595400001; 2-s2.0-85013763791&;PMID: 26799652
D. Klionsky, K. Abdelmohsen, A. Abe, M. Abedin +496 more
20161,544 citations Open access
Semantic Scholar
Phytochrome B integrates light and temperature signals in Arabidopsis
M. Legris, Cornelia Klose, E. Burgie, Cecilia Costigliolo Rojas +6 more
2016Science759 citations Open access
Semantic Scholar
Autophagy: The Master of Bulk and Selective Recycling.
R. S. Marshall, R. Vierstra
2018Annual Review of Plant Biology538 citations Open access
Semantic Scholar
Autophagic Degradation of the 26S Proteasome Is Mediated by the Dual ATG8/Ubiquitin Receptor RPN10 in Arabidopsis
R. S. Marshall, Fa-Qiang Li, D. Gemperline, A. J. Book +1 more
2015Molecules and Cells374 citations Open access
Semantic Scholar
ATG8-binding UIM Proteins Define a New Class of Autophagy Adaptors and Receptors
R. S. Marshall, Zhi-Hua Hua, S. Mali, F. McLoughlin +1 more
2019Cell262 citations Open access
Semantic Scholar
Autophagic Recycling Plays a Central Role in Maize Nitrogen Remobilization
Fa-Qiang Li, Taijoon Chung, Janice G. Pennington, Maria L. Federico +4 more
2015The Plant Cell228 citations Open access
Semantic Scholar
Dynamic Regulation of the 26S Proteasome: From Synthesis to Degradation
R. S. Marshall, R. Vierstra
2019Frontiers in Molecular Biosciences203 citations Open access
Semantic Scholar
Drop-on-Demand Sample Delivery for Studying Biocatalysts in Action at XFELs
F. Fuller, S. Gul, R. Chatterjee, E. Burgie +52 more
2017Nature Methods169 citations Open access
Semantic Scholar
Autophagic Turnover of Inactive 26S Proteasomes in Yeast Is Directed by the Ubiquitin Receptor Cue5 and the Hsp42 Chaperone.
R. S. Marshall, F. McLoughlin, R. Vierstra
2016Cell Reports144 citations Open access
Semantic Scholar
SUMOylation: re-wiring the plant nucleus during stress and development.
Robert C. Augustine, R. Vierstra
2018Current opinion in plant biology139 citations Open access
Semantic Scholar
Crystal Structure of Deinococcus Phytochrome in the Photoactivated State Reveals a Cascade of Structural Rearrangements during Photoconversion.
E. Burgie, Junrui Zhang, R. Vierstra
2016Structure138 citations Open access
Semantic Scholar
SUMOylome Profiling Reveals a Diverse Array of Nuclear Targets Modified by the SUMO Ligase SIZ1 during Heat Stress
Thérèse C. Rytz, Marcus J. Miller, F. McLoughlin, Robert C. Augustine +6 more
2018The Plant Cell136 citations Open access
Semantic Scholar
The Endosomal Protein CHARGED MULTIVESICULAR BODY PROTEIN1 Regulates the Autophagic Turnover of Plastids in Arabidopsis
Christoph Spitzer, Fa-Qiang Li, R. Buono, Hannetz Roschzttardtz +5 more
2015The Plant Cell134 citations Open access
Semantic Scholar
Selective autophagy regulates heat stress memory in Arabidopsis by NBR1-mediated targeting of HSP90.1 and ROF1
V. P. Thirumalaikumar, M. Górka, Karina Schulz, Céline Masclaux-Daubresse +4 more
2020Autophagy132 citations Open access
Semantic Scholar
Maize multi-omics reveal roles for autophagic recycling in proteome remodelling and lipid turnover
F. McLoughlin, Robert C. Augustine, R. S. Marshall, Fa-Qiang Li +3 more
2018Nature Plants132 citations
Semantic Scholar
Genetic Analyses of the Arabidopsis ATG1 Kinase Complex Reveal Both Kinase-Dependent and Independent Autophagic Routes during Fixed-Carbon Starvation
Xiao Huang, Chun-Yan Zheng, Fen Liu, Chao Yang +9 more
2019The Plant Cell116 citations Open access
Semantic Scholar
Oxidation and alkylation stresses activate ribosome-quality control
Liewei L. Yan, Carrie L. Simms, F. McLoughlin, R. Vierstra +1 more
2019Nature Communications111 citations Open access
Semantic Scholar
Bacteria Exploit Autophagy for Proteasome Degradation and Enhanced Virulence in Plants[OPEN]
Suayib Üstün, A. Hafrén, Qin-Song Liu, R. S. Marshall +4 more
2018The Plant Cell110 citations Open access
Semantic Scholar
Arabidopsis cargo receptor NBR1 mediates selective autophagy of defective proteins
Hyera Jung, H. Lee, R. S. Marshall, Aaron Lomax +5 more
2019Journal of Experimental Botany94 citations Open access
Semantic Scholar
HSP101 Interacts with the Proteasome and Promotes the Clearance of Ubiquitylated Protein Aggregates1[OPEN]
F. McLoughlin, Minsoo Kim, R. S. Marshall, R. Vierstra +1 more
2019Plant Physiology92 citations Open access
Semantic Scholar
The Proteasome Stress Regulon Is Controlled by a Pair of NAC Transcription Factors in Arabidopsis
Nicholas Gladman, R. S. Marshall, Kwang-Hee Lee, R. Vierstra
2016The Plant Cell82 citations Open access
Semantic Scholar
Autophagy Plays Prominent Roles in Amino Acid, Nucleotide, and Carbohydrate Metabolism during Fixed-Carbon Starvation in Maize[OPEN]
F. McLoughlin, R. S. Marshall, Xinxin Ding, Elizabeth C. Chatt +5 more
2020The Plant Cell81 citations Open access
Semantic Scholar
Proteasome storage granules protect proteasomes from autophagic degradation upon carbon starvation
R. S. Marshall, R. Vierstra
2018eLife76 citations Open access
Semantic Scholar
Reticulon proteins modulate autophagy of the endoplasmic reticulum in maize endosperm
Xiaoguo Zhang, Xinxin Ding, R. S. Marshall, Julio Paez-Valencia +3 more
2020eLife73 citations Open access
Semantic Scholar
Defining the SUMO System in Maize: SUMOylation Is Up-Regulated during Endosperm Development and Rapidly Induced by Stress1[OPEN]
Robert C. Augustine, Samuel L York, Thérèse C. Rytz, R. Vierstra
2016Plant Physiology73 citations Open access
Semantic Scholar
AUTOPHAGY-RELATED14 and Its Associated Phosphatidylinositol 3-Kinase Complex Promote Autophagy in Arabidopsis[OPEN]
Fen Liu, Wei-Ming Hu, Fa-Qiang Li, R. S. Marshall +3 more
2020The Plant Cell71 citations Open access
Semantic Scholar
Plant phytochrome B is an asymmetric dimer with unique signalling potential
Hua Li, E. Burgie, Zira T. K. Gannam, Hui-Lin Li +1 more
2022Nature69 citations Open access
Semantic Scholar
KELCH F-BOX protein positively influences Arabidopsis seed germination by targeting PHYTOCHROME-INTERACTING FACTOR1
Manoj Majee, Santosh Kumar, P. Kathare, Shuiqin Wu +14 more
2018Proceedings of the National Academy of Sciences of the United States of America69 citations Open access
Semantic Scholar
N1-methylpseudouridine found within COVID-19 mRNA vaccines produces faithful protein products
Kyusik Q. Kim, Bhagyashri D. Burgute, Shin-Cheng Tzeng, Crystal Jing +7 more
2022Cell Reports61 citations Open access
Semantic Scholar
PCH1 regulates light, temperature, and circadian signaling as a structural component of phytochrome B-photobodies in Arabidopsis
He Huang, Katrice E. McLoughlin, Maria L. Sorkin, E. Burgie +3 more
2019Proceedings of the National Academy of Sciences of the United States of America61 citations Open access
Semantic Scholar
Erratum to: Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) (Autophagy, 12, 1, 1-222, 10.1080/15548627.2015.1100356
D. Klionsky, K. Abdelmohsen, A. Abe, J. Abedin +496 more
201650 citations Open access
Semantic Scholar
Photosensing and Thermosensing by Phytochrome B Require Both Proximal and Distal Allosteric Features within the Dimeric Photoreceptor
E. Burgie, Adam N. Bussell, S. Lye, Tong Wang +5 more
2017Scientific Reports44 citations Open access
Semantic Scholar
Differing biophysical properties underpin the unique signaling potentials within the plant phytochrome photoreceptor families
E. Burgie, Z.T.K. Gannam, Katrice E. McLoughlin, Christopher D. Sherman +3 more
2021Proceedings of the National Academy of Sciences of the United States of America42 citations Open access
Semantic Scholar
Ubiquitylome Analysis Reveals a Central Role for the Ubiquitin-Proteasome System in Plant Innate Immunity
Xi-Yu Ma, Chao Zhang, Do Young Kim, Yanyan Huang +4 more
2020bioRxiv36 citations Open access
Semantic Scholar
The Vacuolar Protein Sorting-38 Subunit of the Arabidopsis Phosphatidylinositol-3-Kinase Complex Plays Critical Roles in Autophagy, Endosome Sorting, and Gravitropism
Fen Liu, Wei-Ming Hu, R. Vierstra
2018Frontiers in Plant Science36 citations Open access
Semantic Scholar
Eat or be eaten: The autophagic plight of inactive 26S proteasomes
R. S. Marshall, R. Vierstra
2015Autophagy36 citations Open access
Semantic Scholar
Ubiquitin carboxyl-terminal hydrolases are required for period maintenance of the circadian clock at high temperature in Arabidopsis
R. Hayama, Peizhen Yang, F. Valverde, T. Mizoguchi +3 more
2019Scientific Reports35 citations Open access
Semantic Scholar
Mass Spectrometric Analyses Reveal a Central Role for Ubiquitylation in Remodeling the Arabidopsis Proteome during Photomorphogenesis
V. Aguilar-Hernández, Do-Young Kim, Robert J. Stankey, M. Scalf +2 more
2017Molecular Plant34 citations Open access
Semantic Scholar
The autophagy receptor NBR1 directs the clearance of photodamaged chloroplasts
H. Lee, J. Chacko, Ariadna Gonzalez Solís, Kuo-En Chen +6 more
2023bioRxiv31 citations Open access
Semantic Scholar
An improved Spirodela polyrhiza genome and proteomic analyses reveal a conserved chromosomal structure with high abundances of chloroplastic proteins favoring energy production.
A. Harkess, F. McLoughlin, N. Bilkey, Kiona Elliott +7 more
2021Journal of Experimental Botany28 citations Open access
Semantic Scholar
Variation in upstream open reading frames contributes to allelic diversity in maize protein abundance
Joseph L. Gage, S. Mali, F. McLoughlin, Merritt Khaipho-Burch +4 more
2022Proceedings of the National Academy of Sciences of the United States of America27 citations Open access
Semantic Scholar
Revised nomenclature and functional overview of the ULP gene family of plant deSUMOylating proteases
P. H. Castro, A. Bachmair, Eduardo R. Bejarano, G. Coupland +5 more
2018Journal of Experimental Botany26 citations Open access
Semantic Scholar
Photoreversible interconversion of a phytochrome photosensory module in the crystalline state
E. Burgie, J. Clinger, Mitchell D. Miller, A. Brewster +23 more
2019Proceedings of the National Academy of Sciences of the United States of America24 citations Open access
Semantic Scholar
Proteomic analysis of affinity-purified 26S proteasomes identifies a suite of assembly chaperones in Arabidopsis
D. Gemperline, R. S. Marshall, Kwang-Hee Lee, Qingzhen Zhao +5 more
2019Journal of Biological Chemistry23 citations Open access
Semantic Scholar
X-ray Radiation Induces Deprotonation of the Bilin Chromophore in Crystalline D. radiodurans Phytochrome
Feifei Li, E. Burgie, Tao Yu, A. Héroux +3 more
2015Journal of the American Chemical Society22 citations Open access
Semantic Scholar
The structure of Arabidopsis phytochrome A reveals topological and functional diversification among the plant photoreceptor isoforms
E. Burgie, Hua Li, Zira T. K. Gannam, Katrice E. McLoughlin +2 more
2023Nature Plants20 citations Open access
Semantic Scholar
Microautophagy Mediates Vacuolar Delivery of Storage Proteins in Maize Aleurone Cells
Xinxin Ding, Xiaoguo Zhang, Julio Paez-Valencia, F. McLoughlin +5 more
2022Frontiers in Plant Science20 citations Open access
Semantic Scholar
Autophagy during Maize Endosperm Development Dampens Oxidative Stress and Promotes Mitochondrial Clearance.
Jessica A. S. Barros, Elizabeth C. Chatt, Robert C. Augustine, F. McLoughlin +3 more
2023Plant Physiology18 citations Open access
Semantic Scholar
Proteasomes accumulate in the plant apoplast where they participate in microbe-associated molecular pattern (MAMP)-triggered pathogen defense
H. Z. Karimi, Kuo-En Chen, Marilee Karinshak, Xilin Gu +2 more
2025Nature Communications16 citations
Semantic Scholar

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