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David A. Baker · SciRah

Researcher profile · Semantic Scholar

David A. Baker

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David A. Baker — researcher profile on SciRah

h-index: 14
Works: 22
Citations: 596

Most-cited papers

Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks
K. Braun, G. Moreno, Cassia Wagner, M. Accola +7 more
2021PLoS Pathogens110 citations Open access
Semantic Scholar
Characterization of a new SARS-CoV-2 variant that emerged in Brazil
M. Imai, Peter J. Halfmann, S. Yamayoshi, Kiyoko Iwatsuki-Horimoto +55 more
2021Proceedings of the National Academy of Sciences of the United States of America75 citations Open access
Semantic Scholar
The landscape of antibody binding in SARS-CoV-2 infection
A. Heffron, S. McIlwain, M. Amjadi, David A. Baker +9 more
2021PLoS Biology71 citations Open access
Semantic Scholar
Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck
K. Braun, G. Moreno, Peter J. Halfmann, Emma B. Hodcroft +11 more
2021PLoS Pathogens56 citations Open access
Semantic Scholar
Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck
K. Braun, G. Moreno, Peter J. Halfmann, Emma B. Hodcroft +11 more
2020bioRxiv52 citations Open access
Semantic Scholar
Evolution of a globally unique SARS-CoV-2 Spike E484T monoclonal antibody escape mutation in a persistently infected, immunocompromised individual
Peter J. Halfmann, Nicholas R. Minor, Luis A. Haddock, Robert Maddox +17 more
2022medRxiv35 citations Open access
Semantic Scholar
Viral Sequencing to Investigate Sources of SARS-CoV-2 Infection in US Healthcare Personnel
K. Braun, G. Moreno, A. Buys, Elizabeth D. Somsen +9 more
2021Clinical Infectious Diseases31 citations Open access
Semantic Scholar
Viral sequencing reveals US healthcare personnel rarely become infected with SARS-CoV-2 through patient contact
K. Braun, G. Moreno, A. Buys, Elizabeth D. Somsen +10 more
2021medRxiv25 citations Open access
Semantic Scholar
In Vitro Efficacy of Antiviral Agents against Omicron Subvariant BA.4.6
E. Takashita, S. Yamayoshi, Peter J. Halfmann, N. Wilson +22 more
2022New England Journal of Medicine24 citations Open access
Semantic Scholar
Characterization of 100 extended major histocompatibility complex haplotypes in Indonesian cynomolgus macaques
Cecilia G. Shortreed, R. Wiseman, J. Karl, Hailey E. Bussan +6 more
2019Immunogenetics20 citations Open access
Semantic Scholar
Antibody responses to Zika virus proteins in pregnant and non-pregnant macaques
A. Heffron, E. Mohr, David A. Baker, A. Haj +16 more
2018bioRxiv17 citations Open access
Semantic Scholar
MHC genotyping from rhesus macaque exome sequences
John R. Caskey, R. Wiseman, J. Karl, David A. Baker +8 more
2019Immunogenetics16 citations Open access
Semantic Scholar
High-throughput identification of MHC class I binding peptides using an ultradense peptide array
A. Haj, Meghan E. Breitbach, David A. Baker, M. Mohns +7 more
2019Journal of Immunology16 citations Open access
Semantic Scholar
Consistent ultra-long DNA sequencing with automated slow pipetting
T. Prall, Emma K. Neumann, J. Karl, Cecilia G. Shortreed +4 more
2020BMC Genomics14 citations Open access
Semantic Scholar
Limited within-host diversity and tight transmission bottlenecks limit SARS-CoV-2 evolution in acutely infected individuals
K. Braun, G. Moreno, Cassia Wagner, M. Accola +7 more
2021bioRxiv11 citations Open access
Semantic Scholar
The landscape of antibody binding to SARS-CoV-2
A. Heffron, S. McIlwain, M. Amjadi, David A. Baker +6 more
2020bioRxiv9 citations Open access
Semantic Scholar
Distinct patterns of SARS-CoV-2 transmission in two nearby communities in Wisconsin, USA
G. Moreno, K. Braun, Kasen K. Riemersma, Michael A. Martin +21 more
2020medRxiv9 citations Open access
Semantic Scholar
Subclinical Infection of Macaques and Baboons with A Baboon Simarterivirus
C. Buechler, Matthew R. Semler, David A. Baker, C. Newman +9 more
2018Viruses4 citations Open access
Semantic Scholar
Detecting SARS-CoV-2 cryptic lineages using publicly available whole genome wastewater sequencing data
R. Suarez, D. Gregory, David A. Baker, C. Rushford +6 more
2024medRxiv2 citations Open access
Semantic Scholar
Complete genomic assembly of Mauritian cynomolgus macaque killer immunoglobulin-like receptor and natural killer group 2 haplotypes
T. Prall, J. Karl, Joshua M. Varghese, David A. Baker +6 more
2023bioRxiv0 citations Open access
Semantic Scholar
Full title: The landscape of antibody binding in SARS-CoV-2 infection Short title: SARS-CoV-2 antibody binding landscape
A. Heffron, S. McIlwain, M. Amjadi, David A. Baker +6 more
20210 citations
Semantic Scholar
Subclinical infection of macaques and baboons with a baboon simartevirus
C. Buechler, Matthew R. Semler, David A. Baker, C. Newman +9 more
2018bioRxiv0 citations Open access
Semantic Scholar

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Peter J. Halfmann

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