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A. Pabis · SciRah

Researcher profile · Semantic Scholar

A. Pabis

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A. Pabis — researcher profile on SciRah

h-index: 17
Works: 30
Citations: 872

Most-cited papers

Evolution of chalcone isomerase from a noncatalytic ancestor
M. Kaltenbach, J. Burke, Mirco Dindo, A. Pabis +5 more
2017bioRxiv137 citations Open access
Semantic Scholar
A New Maximum Likelihood Approach for Free Energy Profile Construction from Molecular Simulations
Tai-Sung Lee, B. Radak, A. Pabis, D. York
2012Journal of Chemical Theory and Computation91 citations Open access
Semantic Scholar
Cooperativity and flexibility in enzyme evolution.
A. Pabis, V. Risso, J. Sanchez-Ruiz, S. C. Kamerlin
2018Current Opinion in Structural Biology82 citations Open access
Semantic Scholar
GTP Hydrolysis Without an Active Site Base: A Unifying Mechanism for Ras and Related GTPases.
A. R. Calixto, Cátia Moreira, A. Pabis, Carsten Kötting +3 more
2019Journal of the American Chemical Society62 citations Open access
Semantic Scholar
Influenza hemagglutinin drives viral entry via two sequential intramembrane mechanisms
A. Pabis, R. Rawle, P. Kasson
2020Proceedings of the National Academy of Sciences of the United States of America52 citations Open access
Semantic Scholar
Cryptic genetic variation shapes the adaptive evolutionary potential of enzymes
F. Baier, N. Hong, Gloria Yang, A. Pabis +6 more
2019eLife46 citations Open access
Semantic Scholar
Promiscuity and electrostatic flexibility in the alkaline phosphatase superfamily.
A. Pabis, S. C. L. Kamerlin
2016Current Opinion in Structural Biology46 citations Open access
Semantic Scholar
Promiscuity in the Enzymatic Catalysis of Phosphate and Sulfate Transfer
A. Pabis, Fernanda Duarte, Shina Caroline Lynn Kamerlin
2016Biochemistry43 citations Open access
Semantic Scholar
Extending the Nonbonded Cationic Dummy Model to Account for Ion-Induced Dipole Interactions
Qinghua Liao, A. Pabis, B. Strodel, Shina Caroline Lynn Kamerlin
2017Journal of Physical Chemistry Letters41 citations Open access
Semantic Scholar
Density and temperature effect on hydrogen-bonded clusters in water - MD simulation study
D. Swiatla-Wojcik, A. Pabis, Joanna Szala
200839 citations Open access
Semantic Scholar
Substrate and Enzyme Specificity of the Kinetic Isotope Effects Associated with the Dioxygenation of Nitroaromatic Contaminants.
Sarah G. Pati, H. Kohler, A. Pabis, P. Paneth +2 more
2016Environmental Science and Technology29 citations Open access
Semantic Scholar
Molecular dynamics study of the hydration of the hydroxyl radical at body temperature.
A. Pabis, J. Szala-Bilnik, D. Swiatla-Wojcik
2011Physical Chemistry, Chemical Physics - PCCP29 citations
Semantic Scholar
Molecular Dynamics Simulation of Nitrobenzene Dioxygenase Using AMBER Force Field
A. Pabis, Inacrist Geronimo, D. York, P. Paneth
2014Journal of Chemical Theory and Computation28 citations Open access
Semantic Scholar
A DFT Study of the cis-Dihydroxylation of Nitroaromatic Compounds Catalyzed by Nitrobenzene Dioxygenase
A. Pabis, Inacrist Geronimo, P. Paneth
2014Journal of Physical Chemistry B26 citations Open access
Semantic Scholar
Probing the mechanisms for the selectivity and promiscuity of methyl parathion hydrolase
Miha Purg, A. Pabis, F. Baier, N. Tokuriki +2 more
2016Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences24 citations Open access
Semantic Scholar
A DFT Study of the Kinetic Isotope Effects on the Competing SN2 and E2 Reactions between Hypochlorite Anion and Ethyl Chloride.
A. Pabis, P. Paluch, Joanna Szala, P. Paneth
2009Journal of Chemical Theory and Computation19 citations
Semantic Scholar
Bifunctional Substrate Activation via an Arginine Residue Drives Catalysis in Chalcone Isomerases
J. Burke, J. L. La Clair, R. Philippe, A. Pabis +11 more
2018bioRxiv18 citations Open access
Semantic Scholar
Measurements of heavy-atom isotope effects using 1H NMR spectroscopy.
A. Pabis, R. Kamiński, Grzegorz Ciepielowski, S. Jankowski +1 more
2011Journal of Organic Chemistry18 citations
Semantic Scholar
Enhancing the Steroid Sulfatase Activity of the Arylsulfatase from Pseudomonas aeruginosa
D. R. Uduwela, A. Pabis, B. Stevenson, S. C. Kamerlin +1 more
2018ACS Catalysis15 citations Open access
Semantic Scholar
A theoretical study of carbon-carbon bond formation by a Michael-type addition.
K. Ṡwiderek, A. Pabis, V. Moliner
2012Organic and biomolecular chemistry14 citations
Semantic Scholar
The structure of cyclolinopeptide A in chloroform refined by RDC measurements
K. Huben, M. Jewgiński, A. Pabis, P. Paluch +2 more
2014Journal of Peptide Science11 citations
Semantic Scholar
Simulating the reactions of substituted pyridinio-N-phosphonates with pyridine as a model for biological phosphoryl transfer.
A. Pabis, N. H. Williams, S. C. L. Kamerlin
2017Organic and biomolecular chemistry3 citations Open access
Semantic Scholar
Cryptic genetic variation defines the adaptive evolutionary potential of enzymes
F. Baier, N. Hong, Gloria Yang, A. Pabis +5 more
2017bioRxiv1 citations Open access
Semantic Scholar
Atomic-Resolution Simulations Show Two Sequential Fusion Peptide Mechanisms in Influenza Membrane Fusion
A. Pabis, P. Kasson
2019Biophysical Journal0 citations Open access
Semantic Scholar
Crystal Structure of Chalcone Isomerase from Medicago Sativa with the G95T mutation
J. Burke, J. La Clair, R. Philippe, A. Pabis +9 more
20190 citations
Semantic Scholar
Crystal Structure of Chalcone Isomerase from Medicago Truncatula Complexed with (2S) Naringenin
J. Burke, J. La Clair, R. Philippe, A. Pabis +9 more
20190 citations
Semantic Scholar
Crystal Structure of Chalcone Isomerase from Medicago Sativa with the G95S mutation.
J. Burke, J. L. La Clair, R. Philippe, A. Pabis +9 more
20190 citations
Semantic Scholar
Author response: Cryptic genetic variation shapes the adaptive evolutionary potential of enzymes
F. Baier, N. Hong, Gloria Yang, A. Pabis +6 more
20180 citations Open access
Semantic Scholar
Introduction to the Empirical Valence Bond Approach
Fernanda Duarte, A. Pabis, Shina Caroline Lynn Kamerlin
20170 citations
Semantic Scholar
Cryptic genetic variation shapes the adaptive evolutionary 1 potential of enzymes 2 3
F. Baier, N. Hong, Gloria Yang, A. Pabis +7 more
0 citations
Semantic Scholar

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