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Sarah E. Boyd · SciRah

Researcher profile · Semantic Scholar

Sarah E. Boyd

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Sarah E. Boyd — researcher profile on SciRah

h-index: 19
Works: 48
Citations: 2,318

Most-cited papers

The Systems Biology Graphical Notation
N. Le Novère, M. Hucka, H. Mi, S. Moodie +35 more
2009Nature Biotechnology977 citations
Semantic Scholar
Cascleave: towards more accurate prediction of caspase substrate cleavage sites
Jiangning Song, Hao Tan, Hong-Bin Shen, Khalid Mahmood +4 more
2010Bioinform.153 citations Open access
Semantic Scholar
View from the heart: cardiac fibroblasts in development, scarring and regeneration
Milena B. Furtado, H. Nim, Sarah E. Boyd, N. Rosenthal
2016Development142 citations Open access
Semantic Scholar
Adaptation to reef habitats through selection on the coral animal and its associated microbiome
M. V. van Oppen, P. Bongaerts, P. Frade, L. Peplow +3 more
2018Molecular Ecology108 citations Open access
Semantic Scholar
Membrane Type-1 Matrix Metalloproteinase (MT1-MMP) Exhibits an Important Intracellular Cleavage Function and Causes Chromosome Instability*
V. Golubkov, Sarah E. Boyd, A. Savinov, Alexei V. Chekanov +5 more
2005Journal of Biological Chemistry104 citations Open access
Semantic Scholar
Software support for SBGN maps: SBGN-ML and LibSBGN
Martijn P. van Iersel, A. Villéger, Tobias Czauderna, Sarah E. Boyd +13 more
2012Bioinform.102 citations Open access
Semantic Scholar
Elucidation of the substrate specificity of the MASP-2 protease of the lectin complement pathway and identification of the enzyme as a major physiological target of the serpin, C1-inhibitor.
Felicity K Kerr, A. Thomas, L. Wijeyewickrema, J. Whisstock +7 more
2008Molecular Immunology78 citations
Semantic Scholar
Muscle Stem Cells Undergo Extensive Clonal Drift during Tissue Growth via Meox1-Mediated Induction of G2 Cell-Cycle Arrest.
Phong D. Nguyen, D. Gurevich, C. Sonntag, L. Hersey +8 more
2017Cell Stem Cell75 citations Open access
Semantic Scholar
A Novel Entamoeba histolytica Cysteine Proteinase, EhCP4, Is Key for Invasive Amebiasis and a Therapeutic Target*
Chen He, George P. Nora, Eric L Schneider, I. Kerr +17 more
2010Journal of Biological Chemistry64 citations Open access
Semantic Scholar
PoPS: a computational tool for modeling and predicting protease specificity
Sarah E. Boyd, Maria Garcia de la Banda, R. Pike, J. Whisstock +1 more
2004Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.64 citations
Semantic Scholar
Subsite cooperativity in protease specificity
N. Ng, R. Pike, Sarah E. Boyd
2009Biological chemistry55 citations
Semantic Scholar
Caspase-8 Cleaves Histone Deacetylase 7 and Abolishes Its Transcription Repressor Function*
F. Scott, Greg J. Fuchs, Sarah E. Boyd, J. Denault +3 more
2008Journal of Biological Chemistry54 citations Open access
Semantic Scholar
Characterization of a Serine Protease Homologous to House Dust Mite Group 3 Allergens from the Scabies Mite Sarcoptes scabiei*
S. Beckham, Sarah E. Boyd, Simone L Reynolds, C. Willis +8 more
2009Journal of Biological Chemistry46 citations Open access
Semantic Scholar
Elucidation of the Substrate Specificity of the C1s Protease of the Classical Complement Pathway*
Felicity K Kerr, G. O'Brien, N. Quinsey, J. Whisstock +6 more
2005Journal of Biological Chemistry44 citations Open access
Semantic Scholar
Pops: a Computational Tool for Modeling and Predicting Protease Specificity
Sarah E. Boyd, R. Pike, G. Rudy, J. Whisstock +1 more
2004J. Bioinform. Comput. Biol.44 citations
Semantic Scholar
Bioinformatic Approaches for Predicting substrates of Proteases
Jiangning Song, Hao Tan, Sarah E. Boyd, Hong-Bin Shen +5 more
2011J. Bioinform. Comput. Biol.32 citations
Semantic Scholar
Microarray profiling to analyse adult cardiac fibroblast identity
Milena B. Furtado, H. Nim, J. Gould, Mauro W. Costa +2 more
2014Genomics Data29 citations Open access
Semantic Scholar
Erratum: The Systems Biology Graphical Notation
N. Le Novère, M. Hucka, H. Mi, S. Moodie +35 more
2009Nature Biotechnology20 citations Open access
Semantic Scholar
Communicating the Effect of Human Behaviour on the Great Barrier Reef via Mixed Reality Visualisation
H. Nim, Mengyang Wang, Yujie Zhu, B. Sommer +3 more
2016International Symposium on Big Data Visual Analytics19 citations
Semantic Scholar
3D-Stereoscopic Immersive Analytics Projects at Monash University and University of Konstanz
B. Sommer, David G. Barnes, Sarah E. Boyd, Thomas Chandler +15 more
2017SD&A16 citations Open access
Semantic Scholar
Computational Characterization of 3′ Splice Variants in the GFAP Isoform Family
Sarah E. Boyd, B. Nair, Sze Woei Ng, J. Keith +1 more
2012PLoS ONE14 citations Open access
Semantic Scholar
CARFMAP: A Curated Pathway Map of Cardiac Fibroblasts
H. Nim, Milena B. Furtado, Mauro W. Costa, H. Kitano +2 more
2015PLoS ONE12 citations Open access
Semantic Scholar
Analysis of the minimal specificity of caspase-2 and identification of Ac-VDTTD-AFC as a caspase-2-selective peptide substrate.
Tanja Kitevska, S. Roberts, Delara Pantaki-Eimany, Sarah E. Boyd +2 more
2014Bioscience Reports9 citations Open access
Semantic Scholar
VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery
H. Nim, Milena B. Furtado, Mauro W. Costa, N. Rosenthal +2 more
2015BMC Bioinformatics8 citations Open access
Semantic Scholar
Combinatorial Ranking of Gene Sets to Predict Disease Relapse: The Retinoic Acid Pathway in Early Prostate Cancer
H. Nim, Milena B. Furtado, M. Ramialison, Sarah E. Boyd
2017Frontiers in Oncology7 citations Open access
Semantic Scholar
Systems approaches in integrative cardiac biology: illustrations from cardiac heterocellular signalling studies.
H. Nim, Sarah E. Boyd, N. Rosenthal
2015Progress in Biophysics and Molecular Biology7 citations
Semantic Scholar
Cooperative effects in the substrate specificity of the complement protease C1s
Sarah E. Boyd, Felicity K Kerr, D. W. Albrecht, Maria Garcia de la Banda +2 more
2009Biological chemistry7 citations
Semantic Scholar
Bayesian change-point modeling with segmented ARMA model
F. Sadia, Sarah E. Boyd, J. Keith
2018PLoS ONE6 citations Open access
Semantic Scholar
Interactive Geolocational and Coral Compositional Visualisation of Great Barrier Reef Heat Stress Data
H. Nim, T. Done, Falk Schreiber, Sarah E. Boyd
2015International Symposium on Big Data Visual Analytics5 citations
Semantic Scholar
A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard
J. Keith, Christian M. Davey, Sarah E. Boyd
2012BMC Bioinformatics5 citations Open access
Semantic Scholar
Novel Methods of Incorporating Time in Longitudinal Multivariate Analysis Reveals Hidden Associations With Disease Activity in Systemic Lupus Erythematosus
H. Nim, K. Connelly, F. Vincent, F. Petitjean +4 more
2019Frontiers in Immunology4 citations Open access
Semantic Scholar
Discovery of amino acid motifs for thrombin cleavage and validation using a model substrate.
N. Ng, James Pierce, Geoffrey I. Webb, B. Ratnikov +6 more
2011Biochemistry3 citations
Semantic Scholar
Design and Production of a Recombinant FliC-Antigen Co-Expression Platform for Increased Vaccine Efficacy
Sarah E. Boyd
20142 citations
Semantic Scholar
Genomic taxonomy boost by lexical clustering
K. Gramatikoff, Sarah E. Boyd, J. Smith, J. Keith
20142 citations Open access
Semantic Scholar
Analysis of the minimal specificity of caspase-2 and identification of Ac-VDTTD-AFC as a caspase-2-selective peptide substrate
Tanja Kitevska, S. Roberts, Delara Pantaki-Eimany, Sarah E. Boyd +2 more
2014Bioscience Reports2 citations Open access
Semantic Scholar
Adult fibroblasts retain organ-specific transcriptomic identity
Elvira Forte, M. Ramialison, H. Nim, M. Mara +7 more
2021bioRxiv1 citations Open access
Semantic Scholar
Muscle Stem Cells in Growth and Regeneration
Phong D. Nguyen, C. Sonntag, D. Gurevich, L. Hersey +6 more
20180 citations
Semantic Scholar
Routine Clinical Pathology Measurements Are Associated with Organ Damage Transition in SLE
Kevin S. Zhang, Sarah E. Boyd, F. Petitjean, A. Hoi +3 more
20180 citations
Semantic Scholar
SAT0033 Time-dependent relationships between biological parameters and disease activity in systemic lupus erythematosus
K. Connelly, Hieu T. Nim, F. Vincent, F. Petitjean +4 more
2018Saturday, 16 JUNE 20180 citations Open access
Semantic Scholar
DEV120576 387..397
Milena B. Furtado, H. Nim, Sarah E. Boyd, N. Rosenthal
20160 citations
Semantic Scholar
Probing connectivity between transcriptional and post-transcriptional gene networks
Sarah E. Boyd, J. Keith, Ana Traven, T. Beilharz
20110 citations Open access
Semantic Scholar
LibSBGN: Electronic Processing of SBGN maps
E. Demir, U. Dogrusoz, N. Le Novère, Yukiko Matsuoka +14 more
20110 citations Open access
Semantic Scholar
Simone scabiei Sarcoptes Allergens from the Scabies Mite Homologous to House Dust Mite Group 3 Characterization of a Serine Protease Enzyme
S. Beckham, Sarah E. Boyd, Simone L Reynolds, C. Willis +8 more
20090 citations
Semantic Scholar
Determination of the substrate specificity of the MASP-1 protease of the complement pathway provides initial insights into potential physiological roles
L. Wijeyewickrema, N. Quinsey, N. Thielens, Sarah E. Boyd +4 more
20080 citations
Semantic Scholar
The effects of thrombomodulin on the substrate specificity of thrombin
G. Sotiropoulou, N. Ng, G. Pampalakis, Sarah E. Boyd +6 more
20070 citations
Semantic Scholar
Histone deacetylase 7 is a caspase-8 substrate
F. Scott, G. Sotiropoulou, G. Pampalakis, Sarah E. Boyd +2 more
20070 citations
Semantic Scholar
The phylogeny of the serpin superfamily
J. Irving, Sarah E. Boyd, R. Pike, J. Whisstock
19990 citations
Semantic Scholar
Corrigendum : Multi-site assessment of the precision and reproducibility of multiple reaction monitoring – based measurements of proteins in plasma
N. Le Novère, M. Hucka, H. Mi, S. Moodie +35 more
0 citations
Semantic Scholar

Frequent co-authors

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H. Nim×16
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R. Pike×13
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Falk Schreiber×8
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J. Whisstock×7
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Milena B. Furtado

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N. Rosenthal×7

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H. Kitano — researcher profile on SciRah

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H. Mi — researcher profile on SciRah

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S. Moodie — researcher profile on SciRah

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E. Demir — researcher profile on SciRah

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Yukiko Matsuoka — researcher profile on SciRah